RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 WFDC12Q8WWY7 111 aa8.16□□□□□ -1.1
PGK1-201ENST00000373316 FANCD2OSQ96PS1 177 aa8.16□□□□□ -1.1
PGK1-201ENST00000373316 GTSF1LQ9H1H1 148 aa8.16□□□□□ -1.1
PGK1-201ENST00000373316 USP9YO00507 2555 aaPredicted RBP8.16□□□□□ -1.1
PGK1-201ENST00000373316 ADORA2A-AS1P86434 159 aa8.16□□□□□ -1.1
PGK1-201ENST00000373316 KLK9Q9UKQ9 250 aa8.16□□□□□ -1.1
PGK1-201ENST00000373316 K7EQD1 137 aa8.16□□□□□ -1.1
PGK1-201ENST00000373316 TRAV26-2A0A0B4J265 109 aa8.15□□□□□ -1.1
PGK1-201ENST00000373316 GAGE12JA6NER3 117 aa8.15□□□□□ -1.1
PGK1-201ENST00000373316 GAGE4Q13068 117 aa8.15□□□□□ -1.1
PGK1-201ENST00000373316 GAGE5Q13069 117 aa8.15□□□□□ -1.1
PGK1-201ENST00000373316 MORN5Q5VZ52 161 aa8.15□□□□□ -1.1
PGK1-201ENST00000373316 ZNF469Q96JG9 3925 aaPredicted RBP8.15□□□□□ -1.1
PGK1-201ENST00000373316 ODF1Q14990 250 aa8.15□□□□□ -1.1
PGK1-201ENST00000373316 TENM4Q6N022 2769 aa8.15□□□□□ -1.11
PGK1-201ENST00000373316 NUPR1O60356 82 aa8.15□□□□□ -1.11
PGK1-201ENST00000373316 PIK3CD-AS1Q5SR53 167 aa8.15□□□□□ -1.11
PGK1-201ENST00000373316 C9orf66Q5T8R8 295 aa8.15□□□□□ -1.11
PGK1-201ENST00000373316 RPL35AP18077 110 aaKnown RBP8.14□□□□□ -1.11
PGK1-201ENST00000373316 DEFB113Q30KQ7 82 aa8.14□□□□□ -1.11
PGK1-201ENST00000373316 TEN1Q86WV5 123 aa8.14□□□□□ -1.11
PGK1-201ENST00000373316 SPANXB1Q9NS25 103 aaPredicted RBP8.14□□□□□ -1.11
PGK1-201ENST00000373316 DYSFO75923 2080 aa8.14□□□□□ -1.11
PGK1-201ENST00000373316 MALRD1Q5VYJ5 2156 aa8.14□□□□□ -1.11
PGK1-201ENST00000373316 PTPN13Q12923 2485 aa8.14□□□□□ -1.11
PGK1-201ENST00000373316 HTN3P15516 51 aa8.14□□□□□ -1.11
PGK1-201ENST00000373316 DEFB112Q30KQ8 113 aa8.14□□□□□ -1.11
PGK1-201ENST00000373316 CARD19Q96LW7 228 aa8.14□□□□□ -1.11
PGK1-201ENST00000373316 PROP1O75360 226 aa8.14□□□□□ -1.11
PGK1-201ENST00000373316 GAGE2AQ6NT46 116 aa8.14□□□□□ -1.11
PGK1-201ENST00000373316 Q96MF0 132 aa8.14□□□□□ -1.11
PGK1-201ENST00000373316 NAA38Q9BRA0 125 aaKnown RBP8.14□□□□□ -1.11
PGK1-201ENST00000373316 ZNF561-AS1K7EIQ3 104 aa8.14□□□□□ -1.11
PGK1-201ENST00000373316 TAX1BP3O14907 124 aa8.14□□□□□ -1.11
PGK1-201ENST00000373316 ABCA1O95477 2261 aa8.14□□□□□ -1.11
PGK1-201ENST00000373316 PLA2G5P39877 138 aa8.14□□□□□ -1.11
PGK1-201ENST00000373316 INSL3P51460 131 aa8.14□□□□□ -1.11
PGK1-201ENST00000373316 XCL2Q9UBD3 114 aa8.14□□□□□ -1.11
PGK1-201ENST00000373316 A0A0B4J2C4 111 aa8.13□□□□□ -1.11
PGK1-201ENST00000373316 LOXL1Q08397 574 aaPredicted RBP8.13□□□□□ -1.11
PGK1-201ENST00000373316 ETDBQ3ZM63 59 aa8.13□□□□□ -1.11
PGK1-201ENST00000373316 SMIM20Q8N5G0 67 aa8.13□□□□□ -1.11
PGK1-201ENST00000373316 BAALCQ8WXS3 180 aa8.13□□□□□ -1.11
PGK1-201ENST00000373316 ANKRD39Q53RE8 183 aa8.13□□□□□ -1.11
PGK1-201ENST00000373316 ANKRD29Q8N6D5 301 aa8.13□□□□□ -1.11
PGK1-201ENST00000373316 BRI3O95415 125 aa8.13□□□□□ -1.11
PGK1-201ENST00000373316 PDE6GP18545 87 aa8.13□□□□□ -1.11
PGK1-201ENST00000373316 RITA1Q96K30 269 aa8.12□□□□□ -1.11
PGK1-201ENST00000373316 GNRH2O43555 120 aa8.12□□□□□ -1.11
PGK1-201ENST00000373316 ORMDL1Q9P0S3 153 aa8.12□□□□□ -1.11
PGK1-201ENST00000373316 C19orf84I3L1E1 186 aa8.12□□□□□ -1.11
PGK1-201ENST00000373316 TM2D2Q9BX73 214 aa8.12□□□□□ -1.11
PGK1-201ENST00000373316 U3KQE9 123 aa8.12□□□□□ -1.11
PGK1-201ENST00000373316 RAI1Q7Z5J4 1906 aaPredicted RBP8.12□□□□□ -1.11
PGK1-201ENST00000373316 A0A0J9YX75 114 aa8.12□□□□□ -1.11
PGK1-201ENST00000373316 ZNF580Q9UK33 172 aa8.12□□□□□ -1.11
PGK1-201ENST00000373316 TLN2Q9Y4G6 2542 aa8.11□□□□□ -1.11
PGK1-201ENST00000373316 IGHV4-4A0A075B6R2 117 aa8.11□□□□□ -1.11
PGK1-201ENST00000373316 KNCNA6PVL3 124 aa8.11□□□□□ -1.11
PGK1-201ENST00000373316 IGHV3-53P01767 116 aa8.11□□□□□ -1.11
PGK1-201ENST00000373316 PCP2Q8IVA1 136 aa8.11□□□□□ -1.11
PGK1-201ENST00000373316 BBC3Q96PG8 261 aaPredicted RBP8.11□□□□□ -1.11
PGK1-201ENST00000373316 CCDC168Q8NDH2 2452 aa8.11□□□□□ -1.11
PGK1-201ENST00000373316 PLXNB1O43157 2135 aa8.11□□□□□ -1.11
PGK1-201ENST00000373316 A0A1W2PPR1 153 aa8.11□□□□□ -1.11
PGK1-201ENST00000373316 CCL24O00175 119 aa8.11□□□□□ -1.11
PGK1-201ENST00000373316 TINCRA0A1B0GVN0 87 aa8.11□□□□□ -1.11
PGK1-201ENST00000373316 JMJD7-PLA2G4BH0Y9G9 81 aa8.11□□□□□ -1.11
PGK1-201ENST00000373316 C20orf203Q8NBC4 194 aa8.11□□□□□ -1.11
PGK1-201ENST00000373316 IGHV4-61A0A0C4DH41 118 aa8.11□□□□□ -1.11
PGK1-201ENST00000373316 IGHV1-58A0A0C4DH39 117 aa8.1□□□□□ -1.11
PGK1-201ENST00000373316 TRBV10-2A0A0K0K1G8 114 aa8.1□□□□□ -1.11
PGK1-201ENST00000373316 C9orf153Q5TBE3 101 aa8.1□□□□□ -1.11
PGK1-201ENST00000373316 PRORYQ9H606 182 aa8.1□□□□□ -1.11
PGK1-201ENST00000373316 ICOSQ9Y6W8 199 aa8.1□□□□□ -1.11
PGK1-201ENST00000373316 TRBV6-5A0A0K0K1A5 114 aa8.1□□□□□ -1.11
PGK1-201ENST00000373316 DOPEY1Q5JWR5 2465 aa8.1□□□□□ -1.11
PGK1-201ENST00000373316 TRAV4A0A0B4J268 109 aa8.1□□□□□ -1.11
PGK1-201ENST00000373316 DSCR8Q96T75 97 aa8.1□□□□□ -1.11
PGK1-201ENST00000373316 TRBV7-3A0A075B6L6 115 aa8.09□□□□□ -1.11
PGK1-201ENST00000373316 RBMY1FQ15415 496 aaKnown RBP8.09□□□□□ -1.11
PGK1-201ENST00000373316 CDPF1Q6NVV7 123 aa8.09□□□□□ -1.11
PGK1-201ENST00000373316 Q8N6K4 173 aa8.09□□□□□ -1.11
PGK1-201ENST00000373316 TRAV12-2A0A075B6T6 113 aa8.09□□□□□ -1.11
PGK1-201ENST00000373316 J3QKU1 62 aa8.09□□□□□ -1.11
PGK1-201ENST00000373316 HIST1H4AP62805 103 aaKnown RBP8.09□□□□□ -1.11
PGK1-201ENST00000373316 MAJINQ3KP22 176 aa8.09□□□□□ -1.11
PGK1-201ENST00000373316 DPH3Q96FX2 82 aa8.09□□□□□ -1.11
PGK1-201ENST00000373316 MRPL36Q9P0J6 103 aaKnown RBP8.09□□□□□ -1.11
PGK1-201ENST00000373316 HELZ2Q9BYK8 2649 aaKnown RBP8.09□□□□□ -1.11
PGK1-201ENST00000373316 GAGE7O76087 117 aa8.09□□□□□ -1.11
PGK1-201ENST00000373316 IGHV4-59P01825 116 aa8.09□□□□□ -1.11
PGK1-201ENST00000373316 GAGE12FP0CL80 117 aa8.09□□□□□ -1.11
PGK1-201ENST00000373316 GAGE12GP0CL81 117 aa8.09□□□□□ -1.11
PGK1-201ENST00000373316 GAGE12IP0CL82 117 aa8.09□□□□□ -1.11
PGK1-201ENST00000373316 TIMM17BO60830 172 aa8.09□□□□□ -1.11
PGK1-201ENST00000373316 SMIM9A6NGZ8 99 aa8.08□□□□□ -1.12
PGK1-201ENST00000373316 LINC01620Q4KN68 170 aa8.08□□□□□ -1.12
PGK1-201ENST00000373316 COX8CQ7Z4L0 72 aa8.08□□□□□ -1.12
PGK1-201ENST00000373316 NKAPP1Q8N9T2 125 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms