RNA–Protein interactions for RNA: ENST00000373088.5

PCDH11X-204, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-204ENST00000373088 VAMP3Q15836 100 aa3.34□□□□□ -1.88
PCDH11X-204ENST00000373088 TMEM170BQ5T4T1 132 aa3.34□□□□□ -1.88
PCDH11X-204ENST00000373088 SLC25A34Q6PIV7 304 aa3.34□□□□□ -1.88
PCDH11X-204ENST00000373088 C20orf78Q9BR46 151 aa3.34□□□□□ -1.88
PCDH11X-204ENST00000373088 SPXQ9BT56 116 aa3.34□□□□□ -1.88
PCDH11X-204ENST00000373088 U3KQK5 164 aa3.34□□□□□ -1.88
PCDH11X-204ENST00000373088 M0R143 59 aa3.34□□□□□ -1.88
PCDH11X-204ENST00000373088 G0S2P27469 103 aa3.34□□□□□ -1.88
PCDH11X-204ENST00000373088 COTL1Q14019 142 aa3.34□□□□□ -1.88
PCDH11X-204ENST00000373088 NRACQ8N912 160 aa3.34□□□□□ -1.88
PCDH11X-204ENST00000373088 MIEN1Q9BRT3 115 aa3.34□□□□□ -1.88
PCDH11X-204ENST00000373088 ZFHX3Q15911 3703 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 NBEAL2Q6ZNJ1 2754 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 IGHV4-4A0A075B6R2 117 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 ADARB2-AS1A8MUL3 147 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 RNASE13Q5GAN3 156 aaKnown RBP3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 DEFB121Q5J5C9 76 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 AMMECR1LQ6DCA0 310 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 TEX43Q6ZNM6 134 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 C1orf158Q8N1D5 194 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 C9orf85Q96MD7 179 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 A0A096LPF7 62 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 RHODO00212 210 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 DPM2O94777 84 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 IGKCP01834 107 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 CRYGDP07320 174 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 INSL3P51460 131 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 PTTG1IPP53801 180 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 RPL36AP83881 106 aaKnown RBP3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 RNF151Q2KHN1 245 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 ZC2HC1BQ5TFG8 222 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 SPATA12Q7Z6I5 190 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 ZNF575Q86XF7 245 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 RPL36ALQ969Q0 106 aaKnown RBP3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 NDUFAF3Q9BU61 184 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 VCX2Q9H322 139 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 MRPL35Q9NZE8 188 aaKnown RBP3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 CHTOPQ9Y3Y2 248 aaKnown RBP3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 IGHV3-64A0A075B6Q5 118 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 TMEM262E9PQX1 116 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 I3L3M4 83 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 ZNF479Q96JC4 524 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 SCRT2Q9NQ03 307 aa3.33□□□□□ -1.88
PCDH11X-204ENST00000373088 UBE2L6O14933 153 aa3.32□□□□□ -1.88
PCDH11X-204ENST00000373088 SPATA3Q8NHX4 192 aa3.32□□□□□ -1.88
PCDH11X-204ENST00000373088 VPS25Q9BRG1 176 aa3.32□□□□□ -1.88
PCDH11X-204ENST00000373088 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.32□□□□□ -1.88
PCDH11X-204ENST00000373088 IGKV2-29A2NJV5 120 aaPredicted RBP3.32□□□□□ -1.88
PCDH11X-204ENST00000373088 M0QY20 66 aa3.32□□□□□ -1.88
PCDH11X-204ENST00000373088 KRTAP24-1Q3LI83 254 aa3.32□□□□□ -1.88
PCDH11X-204ENST00000373088 TMEM97Q5BJF2 176 aa3.32□□□□□ -1.88
PCDH11X-204ENST00000373088 MORN3Q6PF18 240 aaPredicted RBP3.32□□□□□ -1.88
PCDH11X-204ENST00000373088 SCGB1D4Q6XE38 83 aa3.32□□□□□ -1.88
PCDH11X-204ENST00000373088 ZFP2Q6ZN57 461 aa3.32□□□□□ -1.88
PCDH11X-204ENST00000373088 OR11H2Q8NH07 326 aa3.32□□□□□ -1.88
PCDH11X-204ENST00000373088 TMEM263Q8WUH6 116 aaKnown RBP3.32□□□□□ -1.88
PCDH11X-204ENST00000373088 OPRPNQ99935 248 aaPredicted RBP3.32□□□□□ -1.88
PCDH11X-204ENST00000373088 TP73-AS1Q9UF72 201 aa3.32□□□□□ -1.88
PCDH11X-204ENST00000373088 MGAM2Q2M2H8 2515 aa3.32□□□□□ -1.88
PCDH11X-204ENST00000373088 J3QR89 54 aa3.32□□□□□ -1.88
PCDH11X-204ENST00000373088 IGLC3P0DOY3 106 aa3.32□□□□□ -1.88
PCDH11X-204ENST00000373088 ZNF25P17030 456 aaPredicted RBP3.32□□□□□ -1.88
PCDH11X-204ENST00000373088 APOC4P55056 127 aa3.32□□□□□ -1.88
PCDH11X-204ENST00000373088 DNLZQ5SXM8 178 aa3.32□□□□□ -1.88
PCDH11X-204ENST00000373088 CFAP126Q5VTH2 177 aa3.32□□□□□ -1.88
PCDH11X-204ENST00000373088 C20orf144Q9BQM9 153 aa3.32□□□□□ -1.88
PCDH11X-204ENST00000373088 ZNF469Q96JG9 3925 aaPredicted RBP3.32□□□□□ -1.88
PCDH11X-204ENST00000373088 NOTCH1P46531 2555 aa3.31□□□□□ -1.88
PCDH11X-204ENST00000373088 A0A0J9YY99 117 aa3.31□□□□□ -1.88
PCDH11X-204ENST00000373088 PRSS29PA6NIE9 313 aa3.31□□□□□ -1.88
PCDH11X-204ENST00000373088 PRB2P02812 416 aaPredicted RBP3.31□□□□□ -1.88
PCDH11X-204ENST00000373088 CEMP1Q6PRD7 247 aaPredicted RBP3.31□□□□□ -1.88
PCDH11X-204ENST00000373088 MRAPQ8TCY5 172 aa3.31□□□□□ -1.88
PCDH11X-204ENST00000373088 C16orf74Q96GX8 76 aa3.31□□□□□ -1.88
PCDH11X-204ENST00000373088 A0A096LNJ9 63 aa3.31□□□□□ -1.88
PCDH11X-204ENST00000373088 HERVK_113P61574 105 aa3.31□□□□□ -1.88
PCDH11X-204ENST00000373088 LGALS9BQ3B8N2 356 aa3.31□□□□□ -1.88
PCDH11X-204ENST00000373088 LGALS9CQ6DKI2 356 aa3.31□□□□□ -1.88
PCDH11X-204ENST00000373088 ERASQ7Z444 233 aa3.31□□□□□ -1.88
PCDH11X-204ENST00000373088 PRADC1Q9BSG0 188 aa3.31□□□□□ -1.88
PCDH11X-204ENST00000373088 CHCHD5Q9BSY4 110 aa3.31□□□□□ -1.88
PCDH11X-204ENST00000373088 TTTY13Q9BZ97 58 aa3.31□□□□□ -1.88
PCDH11X-204ENST00000373088 F5H768 121 aa3.31□□□□□ -1.88
PCDH11X-204ENST00000373088 DAD1P61803 113 aa3.31□□□□□ -1.88
PCDH11X-204ENST00000373088 BEAN1Q3B7T3 259 aa3.31□□□□□ -1.88
PCDH11X-204ENST00000373088 ANKRD39Q53RE8 183 aa3.31□□□□□ -1.88
PCDH11X-204ENST00000373088 LINC01545Q5VT33 79 aa3.31□□□□□ -1.88
PCDH11X-204ENST00000373088 GTF2H5Q6ZYL4 71 aa3.31□□□□□ -1.88
PCDH11X-204ENST00000373088 GEMIN7Q9H840 131 aaKnown RBP3.31□□□□□ -1.88
PCDH11X-204ENST00000373088 Q9UF83 564 aa3.31□□□□□ -1.88
PCDH11X-204ENST00000373088 MUC4Q99102 2169 aa3.31□□□□□ -1.88
PCDH11X-204ENST00000373088 PAPPA-AS1Q5QFB9 102 aa3.3□□□□□ -1.88
PCDH11X-204ENST00000373088 Q8N976 141 aa3.3□□□□□ -1.88
PCDH11X-204ENST00000373088 KIF25-AS1Q9Y6Z4 181 aa3.3□□□□□ -1.88
PCDH11X-204ENST00000373088 TRAV13-1A0A0B4J241 112 aa3.3□□□□□ -1.88
PCDH11X-204ENST00000373088 KIR2DL5BA0A0G2JN68 375 aa3.3□□□□□ -1.88
PCDH11X-204ENST00000373088 KIR2DL5BA0A0G2JPC4 375 aa3.3□□□□□ -1.88
PCDH11X-204ENST00000373088 A0A1B0GV90 55 aa3.3□□□□□ -1.88
PCDH11X-204ENST00000373088 EREGO14944 169 aa3.3□□□□□ -1.88
PCDH11X-204ENST00000373088 GCSHP23434 173 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms