RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 DCHS2Q6V1P9 2916 aa6.69□□□□□ -1.34
ATG4A-203ENST00000372232 BUB1B-PAK6H3BSN5 160 aa6.69□□□□□ -1.34
ATG4A-203ENST00000372232 IGHV4-39P01824 125 aa6.69□□□□□ -1.34
ATG4A-203ENST00000372232 PRB3Q04118 309 aaPredicted RBP6.69□□□□□ -1.34
ATG4A-203ENST00000372232 NEXN-AS1Q8NBZ9 246 aa6.69□□□□□ -1.34
ATG4A-203ENST00000372232 SMCR5Q8TEV8 140 aa6.69□□□□□ -1.34
ATG4A-203ENST00000372232 CNFNQ9BYD5 112 aa6.68□□□□□ -1.34
ATG4A-203ENST00000372232 SIRPDQ9H106 197 aa6.68□□□□□ -1.34
ATG4A-203ENST00000372232 TMEM14CQ9P0S9 112 aa6.68□□□□□ -1.34
ATG4A-203ENST00000372232 TRAV41A0A0B4J266 112 aa6.68□□□□□ -1.34
ATG4A-203ENST00000372232 IGHV1-3A0A0C4DH29 117 aa6.68□□□□□ -1.34
ATG4A-203ENST00000372232 IGHV3-48P01763 117 aa6.68□□□□□ -1.34
ATG4A-203ENST00000372232 BEAN1Q3B7T3 259 aa6.68□□□□□ -1.34
ATG4A-203ENST00000372232 PVRIGQ6DKI7 326 aa6.68□□□□□ -1.34
ATG4A-203ENST00000372232 DPH3P1Q9H4G8 78 aa6.68□□□□□ -1.34
ATG4A-203ENST00000372232 NAV3Q8IVL0 2385 aa6.67□□□□□ -1.34
ATG4A-203ENST00000372232 EPM2AB3EWF7 344 aa6.67□□□□□ -1.34
ATG4A-203ENST00000372232 KLHL30-AS1Q8NEE0 82 aa6.67□□□□□ -1.34
ATG4A-203ENST00000372232 MRPL36Q9P0J6 103 aaKnown RBP6.67□□□□□ -1.34
ATG4A-203ENST00000372232 SH2D1AO60880 128 aa6.67□□□□□ -1.34
ATG4A-203ENST00000372232 LY6HO94772 140 aa6.67□□□□□ -1.34
ATG4A-203ENST00000372232 COX7A1P24310 79 aa6.67□□□□□ -1.34
ATG4A-203ENST00000372232 HCP5Q6MZN7 132 aa6.67□□□□□ -1.34
ATG4A-203ENST00000372232 COX8CQ7Z4L0 72 aa6.67□□□□□ -1.34
ATG4A-203ENST00000372232 LY6G5BQ8NDX9 201 aa6.67□□□□□ -1.34
ATG4A-203ENST00000372232 GATA1P15976 413 aaPredicted RBP6.66□□□□□ -1.34
ATG4A-203ENST00000372232 ZFP36P26651 326 aaKnown RBP6.66□□□□□ -1.34
ATG4A-203ENST00000372232 PSMB8P28062 276 aa6.66□□□□□ -1.34
ATG4A-203ENST00000372232 RPL27AP46776 148 aaKnown RBP6.66□□□□□ -1.34
ATG4A-203ENST00000372232 RUSC1-AS1Q66K80 236 aa6.66□□□□□ -1.34
ATG4A-203ENST00000372232 C8orf49Q96NF6 230 aa6.66□□□□□ -1.34
ATG4A-203ENST00000372232 PRIMA1Q86XR5 153 aa6.66□□□□□ -1.34
ATG4A-203ENST00000372232 SERP2Q8N6R1 65 aa6.66□□□□□ -1.34
ATG4A-203ENST00000372232 PLXNB1O43157 2135 aa6.66□□□□□ -1.34
ATG4A-203ENST00000372232 HRNRQ86YZ3 2850 aaPredicted RBP6.66□□□□□ -1.34
ATG4A-203ENST00000372232 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.65□□□□□ -1.34
ATG4A-203ENST00000372232 NDUFC2-KCTD14E9PQ53 114 aa6.65□□□□□ -1.34
ATG4A-203ENST00000372232 APELAP0DMC3 54 aa6.65□□□□□ -1.34
ATG4A-203ENST00000372232 RPL18AQ02543 176 aaKnown RBP6.65□□□□□ -1.34
ATG4A-203ENST00000372232 C1orf195Q5TG92 126 aa6.65□□□□□ -1.34
ATG4A-203ENST00000372232 C11orf71Q6IPW1 123 aa6.65□□□□□ -1.34
ATG4A-203ENST00000372232 MSRB1Q9NZV6 116 aa6.65□□□□□ -1.34
ATG4A-203ENST00000372232 TRBV7-1A0A0A6YYK4 115 aa6.65□□□□□ -1.35
ATG4A-203ENST00000372232 FAM236DA0A1B0GTK5 79 aa6.65□□□□□ -1.35
ATG4A-203ENST00000372232 FAM236CP0DP71 79 aa6.65□□□□□ -1.35
ATG4A-203ENST00000372232 Q1RN00 199 aa6.65□□□□□ -1.35
ATG4A-203ENST00000372232 LYPD1Q8N2G4 141 aa6.65□□□□□ -1.35
ATG4A-203ENST00000372232 NRACQ8N912 160 aa6.65□□□□□ -1.35
ATG4A-203ENST00000372232 C10orf105Q8TEF2 133 aa6.65□□□□□ -1.35
ATG4A-203ENST00000372232 TOMM6Q96B49 74 aa6.65□□□□□ -1.35
ATG4A-203ENST00000372232 RNF5Q99942 180 aa6.65□□□□□ -1.35
ATG4A-203ENST00000372232 FAM208BQ5VWN6 2430 aa6.64□□□□□ -1.35
ATG4A-203ENST00000372232 A0A0U1RRA0 63 aa6.64□□□□□ -1.35
ATG4A-203ENST00000372232 TMEM223A0PJW6 202 aa6.64□□□□□ -1.35
ATG4A-203ENST00000372232 H7C2G1 150 aa6.64□□□□□ -1.35
ATG4A-203ENST00000372232 IL17RELQ6ZVW7 336 aa6.64□□□□□ -1.35
ATG4A-203ENST00000372232 SCGB3A1Q96QR1 104 aa6.64□□□□□ -1.35
ATG4A-203ENST00000372232 CFAP46Q8IYW2 2715 aa6.64□□□□□ -1.35
ATG4A-203ENST00000372232 TRBV19A0A075B6N1 114 aa6.64□□□□□ -1.35
ATG4A-203ENST00000372232 AMELXQ99217 191 aa6.64□□□□□ -1.35
ATG4A-203ENST00000372232 IGHV3-21A0A0B4J1V1 117 aa6.63□□□□□ -1.35
ATG4A-203ENST00000372232 EGR2P11161 476 aaPredicted RBP6.63□□□□□ -1.35
ATG4A-203ENST00000372232 ERCC8Q13216 396 aa6.63□□□□□ -1.35
ATG4A-203ENST00000372232 ZNF575Q86XF7 245 aa6.63□□□□□ -1.35
ATG4A-203ENST00000372232 BBC3Q96PG8 261 aaPredicted RBP6.63□□□□□ -1.35
ATG4A-203ENST00000372232 DPM3Q9P2X0 92 aa6.63□□□□□ -1.35
ATG4A-203ENST00000372232 COL6A6A6NMZ7 2263 aa6.63□□□□□ -1.35
ATG4A-203ENST00000372232 M0R1W7 72 aa6.62□□□□□ -1.35
ATG4A-203ENST00000372232 LST1O00453 97 aa6.62□□□□□ -1.35
ATG4A-203ENST00000372232 PLGLAQ15195 96 aa6.62□□□□□ -1.35
ATG4A-203ENST00000372232 PAPPA-AS1Q5QFB9 102 aa6.62□□□□□ -1.35
ATG4A-203ENST00000372232 C14orf178Q8N769 122 aaPredicted RBP6.62□□□□□ -1.35
ATG4A-203ENST00000372232 DCANP1Q8TF63 244 aa6.62□□□□□ -1.35
ATG4A-203ENST00000372232 TSPEAR-AS2P59090 65 aa6.62□□□□□ -1.35
ATG4A-203ENST00000372232 ORMDL2Q53FV1 153 aa6.62□□□□□ -1.35
ATG4A-203ENST00000372232 EEF1AKMT3Q96AZ1 226 aa6.62□□□□□ -1.35
ATG4A-203ENST00000372232 TRAV12-2A0A075B6T6 113 aa6.61□□□□□ -1.35
ATG4A-203ENST00000372232 A0A1W2PPR1 153 aa6.61□□□□□ -1.35
ATG4A-203ENST00000372232 ODF3BA8MYP8 253 aa6.61□□□□□ -1.35
ATG4A-203ENST00000372232 I3L2K1 104 aa6.61□□□□□ -1.35
ATG4A-203ENST00000372232 NBR2O15453 112 aa6.61□□□□□ -1.35
ATG4A-203ENST00000372232 C16orf95Q9H693 158 aa6.61□□□□□ -1.35
ATG4A-203ENST00000372232 ICOSQ9Y6W8 199 aa6.61□□□□□ -1.35
ATG4A-203ENST00000372232 SPTBN1Q01082 2364 aaKnown RBP6.61□□□□□ -1.35
ATG4A-203ENST00000372232 ASH1LQ9NR48 2969 aaKnown RBP6.61□□□□□ -1.35
ATG4A-203ENST00000372232 SVEP1Q4LDE5 3571 aa6.61□□□□□ -1.35
ATG4A-203ENST00000372232 NDUFC2O95298 119 aa6.61□□□□□ -1.35
ATG4A-203ENST00000372232 NPC2P61916 151 aa6.61□□□□□ -1.35
ATG4A-203ENST00000372232 NSUN5P1Q3KNT7 163 aa6.61□□□□□ -1.35
ATG4A-203ENST00000372232 NPBQ8NG41 125 aa6.61□□□□□ -1.35
ATG4A-203ENST00000372232 ABCA1O95477 2261 aa6.61□□□□□ -1.35
ATG4A-203ENST00000372232 IGLV4-69A0A075B6H9 119 aa6.6□□□□□ -1.35
ATG4A-203ENST00000372232 C11orf86A6NJI1 115 aa6.6□□□□□ -1.35
ATG4A-203ENST00000372232 COX6CP09669 75 aa6.6□□□□□ -1.35
ATG4A-203ENST00000372232 MUSTN1Q8IVN3 82 aa6.6□□□□□ -1.35
ATG4A-203ENST00000372232 SMIM2Q9BVW6 85 aa6.6□□□□□ -1.35
ATG4A-203ENST00000372232 TP53TG1Q9Y2A0 90 aa6.6□□□□□ -1.35
ATG4A-203ENST00000372232 SERP1Q9Y6X1 66 aa6.6□□□□□ -1.35
ATG4A-203ENST00000372232 RHOHQ15669 191 aa6.6□□□□□ -1.35
ATG4A-203ENST00000372232 HIVEP3Q5T1R4 2406 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms