RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 RNASE13Q5GAN3 156 aaKnown RBP10.27□□□□□ -0.77
RAPGEF1-201ENST00000372189 TRBV27A0A0K0K1C4 114 aa10.27□□□□□ -0.77
RAPGEF1-201ENST00000372189 ZNF106Q9H2Y7 1883 aaKnown RBP10.27□□□□□ -0.77
RAPGEF1-201ENST00000372189 H0YGX0 51 aa10.27□□□□□ -0.77
RAPGEF1-201ENST00000372189 IGHV4-31P0DP07 118 aa10.27□□□□□ -0.77
RAPGEF1-201ENST00000372189 IGLV1-47P01700 117 aa10.26□□□□□ -0.77
RAPGEF1-201ENST00000372189 K7EIM0 57 aa10.26□□□□□ -0.77
RAPGEF1-201ENST00000372189 CGB3P0DN86 165 aa10.26□□□□□ -0.77
RAPGEF1-201ENST00000372189 CLEC2BQ92478 149 aa10.26□□□□□ -0.77
RAPGEF1-201ENST00000372189 Q6Q795 121 aa10.26□□□□□ -0.77
RAPGEF1-201ENST00000372189 A0A0J9YY99 117 aa10.25□□□□□ -0.77
RAPGEF1-201ENST00000372189 P0DMU3 169 aa10.25□□□□□ -0.77
RAPGEF1-201ENST00000372189 FAM231AP0DMU4 169 aa10.25□□□□□ -0.77
RAPGEF1-201ENST00000372189 FAM231CP0DMU5 169 aa10.25□□□□□ -0.77
RAPGEF1-201ENST00000372189 TMEM254Q8TBM7 123 aa10.25□□□□□ -0.77
RAPGEF1-201ENST00000372189 A6NDX4 124 aa10.25□□□□□ -0.77
RAPGEF1-201ENST00000372189 Q9H8V8 135 aa10.25□□□□□ -0.77
RAPGEF1-201ENST00000372189 TTC28Q96AY4 2481 aa10.25□□□□□ -0.77
RAPGEF1-201ENST00000372189 IGLV2-23P01705 113 aa10.25□□□□□ -0.77
RAPGEF1-201ENST00000372189 PPDPFQ9H3Y8 114 aa10.25□□□□□ -0.77
RAPGEF1-201ENST00000372189 NCKAP5O14513 1909 aa10.25□□□□□ -0.77
RAPGEF1-201ENST00000372189 TNFRSF13BO14836 293 aaPredicted RBP10.25□□□□□ -0.77
RAPGEF1-201ENST00000372189 LMO4P61968 165 aa10.25□□□□□ -0.77
RAPGEF1-201ENST00000372189 IGHV4-28A0A0C4DH34 117 aa10.24□□□□□ -0.77
RAPGEF1-201ENST00000372189 LOC107984640A0A0U1RRK4 108 aa10.24□□□□□ -0.77
RAPGEF1-201ENST00000372189 PATE2Q6UY27 113 aa10.24□□□□□ -0.77
RAPGEF1-201ENST00000372189 SOSTDC1Q6X4U4 206 aa10.24□□□□□ -0.77
RAPGEF1-201ENST00000372189 WNK2Q9Y3S1 2297 aa10.24□□□□□ -0.77
RAPGEF1-201ENST00000372189 CTSGP08311 255 aa10.24□□□□□ -0.77
RAPGEF1-201ENST00000372189 RPL18AQ02543 176 aaKnown RBP10.24□□□□□ -0.77
RAPGEF1-201ENST00000372189 SPTAN1Q13813 2472 aaKnown RBP10.24□□□□□ -0.77
RAPGEF1-201ENST00000372189 FXYD2P54710 66 aa10.24□□□□□ -0.77
RAPGEF1-201ENST00000372189 SDIM1Q6ZPB5 146 aa10.24□□□□□ -0.77
RAPGEF1-201ENST00000372189 C16orf74Q96GX8 76 aa10.24□□□□□ -0.77
RAPGEF1-201ENST00000372189 C2orf70A6NJV1 201 aa10.24□□□□□ -0.77
RAPGEF1-201ENST00000372189 EDN2P20800 178 aa10.23□□□□□ -0.77
RAPGEF1-201ENST00000372189 GTSF1Q8WW33 167 aa10.23□□□□□ -0.77
RAPGEF1-201ENST00000372189 ZNF706Q9Y5V0 76 aaPredicted RBP10.23□□□□□ -0.77
RAPGEF1-201ENST00000372189 RPL39LQ96EH5 51 aaKnown RBP10.23□□□□□ -0.77
RAPGEF1-201ENST00000372189 ANGP03950 147 aaKnown RBP10.23□□□□□ -0.77
RAPGEF1-201ENST00000372189 SPART-AS1P0CW21 52 aa10.23□□□□□ -0.77
RAPGEF1-201ENST00000372189 FAM167A-AS1Q96KT0 104 aa10.23□□□□□ -0.77
RAPGEF1-201ENST00000372189 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.22□□□□□ -0.77
RAPGEF1-201ENST00000372189 IGKV2-29A2NJV5 120 aaPredicted RBP10.22□□□□□ -0.77
RAPGEF1-201ENST00000372189 DOCK10Q96BY6 2186 aa10.22□□□□□ -0.77
RAPGEF1-201ENST00000372189 MALRD1Q5VYJ5 2156 aa10.22□□□□□ -0.77
RAPGEF1-201ENST00000372189 ODF3L1Q8IXM7 274 aa10.22□□□□□ -0.77
RAPGEF1-201ENST00000372189 TMEM256-PLSCR3K7ERE1 68 aa10.22□□□□□ -0.77
RAPGEF1-201ENST00000372189 SNURFQ9Y675 71 aa10.22□□□□□ -0.77
RAPGEF1-201ENST00000372189 K7EMT4 169 aa10.21□□□□□ -0.77
RAPGEF1-201ENST00000372189 INAFM1C9JVW0 142 aa10.21□□□□□ -0.77
RAPGEF1-201ENST00000372189 GPHB5Q86YW7 130 aa10.21□□□□□ -0.77
RAPGEF1-201ENST00000372189 CEP192Q8TEP8 1941 aa10.21□□□□□ -0.78
RAPGEF1-201ENST00000372189 PDE6GP18545 87 aa10.21□□□□□ -0.78
RAPGEF1-201ENST00000372189 CD164Q04900 197 aa10.21□□□□□ -0.78
RAPGEF1-201ENST00000372189 MUC22E2RYF6 1773 aaPredicted RBP10.21□□□□□ -0.78
RAPGEF1-201ENST00000372189 IGKV4-1P06312 121 aa10.2□□□□□ -0.78
RAPGEF1-201ENST00000372189 TMEM61Q8N0U2 210 aa10.2□□□□□ -0.78
RAPGEF1-201ENST00000372189 Q8N1Y9 231 aa10.2□□□□□ -0.78
RAPGEF1-201ENST00000372189 MSRB1Q9NZV6 116 aa10.2□□□□□ -0.78
RAPGEF1-201ENST00000372189 INSL3P51460 131 aa10.2□□□□□ -0.78
RAPGEF1-201ENST00000372189 Q6YL49 198 aa10.2□□□□□ -0.78
RAPGEF1-201ENST00000372189 MDFIQ99750 246 aa10.2□□□□□ -0.78
RAPGEF1-201ENST00000372189 C11orf1Q9H5F2 150 aa10.2□□□□□ -0.78
RAPGEF1-201ENST00000372189 SMAD5-AS1Q9Y6J3 95 aa10.2□□□□□ -0.78
RAPGEF1-201ENST00000372189 CADP27708 2225 aa10.2□□□□□ -0.78
RAPGEF1-201ENST00000372189 NDUFA11Q86Y39 141 aa10.2□□□□□ -0.78
RAPGEF1-201ENST00000372189 TOMM6Q96B49 74 aa10.2□□□□□ -0.78
RAPGEF1-201ENST00000372189 KMT2EQ8IZD2 1858 aa10.2□□□□□ -0.78
RAPGEF1-201ENST00000372189 TRBV6-1A0A0K0K1D8 114 aa10.19□□□□□ -0.78
RAPGEF1-201ENST00000372189 C22orf34Q6ZV56 151 aa10.19□□□□□ -0.78
RAPGEF1-201ENST00000372189 IGKV1-17P01599 117 aa10.19□□□□□ -0.78
RAPGEF1-201ENST00000372189 HIGD2BQ4VC39 106 aa10.19□□□□□ -0.78
RAPGEF1-201ENST00000372189 CRYGDP07320 174 aa10.19□□□□□ -0.78
RAPGEF1-201ENST00000372189 ODF3BA8MYP8 253 aa10.19□□□□□ -0.78
RAPGEF1-201ENST00000372189 CGB7P0DN87 165 aa10.19□□□□□ -0.78
RAPGEF1-201ENST00000372189 IGKV2D-24A0A075B6R9 120 aa10.19□□□□□ -0.78
RAPGEF1-201ENST00000372189 WI2-2373I1.2A0A1W2PRP0 233 aa10.18□□□□□ -0.78
RAPGEF1-201ENST00000372189 IGKV1OR2-108A0A075B7D4 117 aa10.18□□□□□ -0.78
RAPGEF1-201ENST00000372189 LGALS9O00182 355 aa10.18□□□□□ -0.78
RAPGEF1-201ENST00000372189 TRIAP1O43715 76 aa10.18□□□□□ -0.78
RAPGEF1-201ENST00000372189 CTRLP40313 264 aa10.18□□□□□ -0.78
RAPGEF1-201ENST00000372189 CCL18P55774 89 aa10.18□□□□□ -0.78
RAPGEF1-201ENST00000372189 CLPSL2Q6UWE3 100 aa10.18□□□□□ -0.78
RAPGEF1-201ENST00000372189 TCL1BO95988 128 aa10.17□□□□□ -0.78
RAPGEF1-201ENST00000372189 FAM222AQ5U5X8 452 aa10.17□□□□□ -0.78
RAPGEF1-201ENST00000372189 LINC00526Q96FQ7 95 aa10.17□□□□□ -0.78
RAPGEF1-201ENST00000372189 A0A0J9YXV3 536 aa10.17□□□□□ -0.78
RAPGEF1-201ENST00000372189 SPRY2O43597 315 aa10.17□□□□□ -0.78
RAPGEF1-201ENST00000372189 IGLV2-14P01704 120 aa10.17□□□□□ -0.78
RAPGEF1-201ENST00000372189 XCL1P47992 114 aa10.17□□□□□ -0.78
RAPGEF1-201ENST00000372189 FSTL3O95633 263 aa10.16□□□□□ -0.78
RAPGEF1-201ENST00000372189 C11orf71Q6IPW1 123 aa10.16□□□□□ -0.78
RAPGEF1-201ENST00000372189 Q6ZQT7 251 aa10.16□□□□□ -0.78
RAPGEF1-201ENST00000372189 C11orf86A6NJI1 115 aa10.16□□□□□ -0.78
RAPGEF1-201ENST00000372189 PSPHP1O15172 72 aa10.16□□□□□ -0.78
RAPGEF1-201ENST00000372189 MED14OSP0DP75 135 aa10.16□□□□□ -0.78
RAPGEF1-201ENST00000372189 SPAG11BQ08648 103 aa10.16□□□□□ -0.78
RAPGEF1-201ENST00000372189 TTTY13Q9BZ97 58 aa10.16□□□□□ -0.78
RAPGEF1-201ENST00000372189 SND1-IT1Q9HBX3 110 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms