RNA–Protein interactions for RNA: ENST00000371834.6

BRD3-202, Transcript of bromodomain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD3, Length 2,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-202ENST00000371834 TRPT1Q86TN4 253 aaKnown RBP16.83■□□□□ 0.28
BRD3-202ENST00000371834 PRM2P04554 102 aa16.82■□□□□ 0.28
BRD3-202ENST00000371834 PGPEP1Q9NXJ5 209 aa16.81■□□□□ 0.28
BRD3-202ENST00000371834 IGHV3-73A0A0B4J1V6 119 aa16.81■□□□□ 0.28
BRD3-202ENST00000371834 A0A0J9YY99 117 aa16.81■□□□□ 0.28
BRD3-202ENST00000371834 FSHBP01225 129 aa16.8■□□□□ 0.28
BRD3-202ENST00000371834 IGHV4-31P0DP07 118 aa16.8■□□□□ 0.28
BRD3-202ENST00000371834 NSUN5P1Q3KNT7 163 aa16.8■□□□□ 0.28
BRD3-202ENST00000371834 LRRK2Q5S007 2527 aa16.8■□□□□ 0.28
BRD3-202ENST00000371834 ZNF462Q96JM2 2506 aa16.8■□□□□ 0.28
BRD3-202ENST00000371834 DEFB131AP59861 70 aa16.79■□□□□ 0.28
BRD3-202ENST00000371834 COTL1Q14019 142 aa16.79■□□□□ 0.28
BRD3-202ENST00000371834 HIST2H2BDQ6DRA6 164 aa16.79■□□□□ 0.28
BRD3-202ENST00000371834 DUX3Q96PT4 197 aa16.79■□□□□ 0.28
BRD3-202ENST00000371834 KRTAP10-9P60411 292 aa16.79■□□□□ 0.28
BRD3-202ENST00000371834 MRPL16Q9NX20 251 aaKnown RBP16.79■□□□□ 0.28
BRD3-202ENST00000371834 TRGV11A0A075B6L2 103 aa16.78■□□□□ 0.28
BRD3-202ENST00000371834 F8W1H4 67 aa16.78■□□□□ 0.28
BRD3-202ENST00000371834 PROK1P58294 105 aa16.78■□□□□ 0.28
BRD3-202ENST00000371834 RHOHQ15669 191 aa16.78■□□□□ 0.28
BRD3-202ENST00000371834 SFTA2Q6UW10 78 aa16.78■□□□□ 0.28
BRD3-202ENST00000371834 PTPN13Q12923 2485 aa16.78■□□□□ 0.28
BRD3-202ENST00000371834 UBE2D1P51668 147 aa16.77■□□□□ 0.28
BRD3-202ENST00000371834 SH2D6Q7Z4S9 175 aa16.77■□□□□ 0.28
BRD3-202ENST00000371834 C20orf203Q8NBC4 194 aa16.77■□□□□ 0.28
BRD3-202ENST00000371834 TEX15Q9BXT5 2789 aa16.77■□□□□ 0.28
BRD3-202ENST00000371834 I3L3M4 83 aa16.77■□□□□ 0.28
BRD3-202ENST00000371834 SPANXB1Q9NS25 103 aaPredicted RBP16.77■□□□□ 0.28
BRD3-202ENST00000371834 CR1P17927 2039 aa16.76■□□□□ 0.27
BRD3-202ENST00000371834 A6NJY4 79 aa16.76■□□□□ 0.27
BRD3-202ENST00000371834 APOMO95445 188 aa16.76■□□□□ 0.27
BRD3-202ENST00000371834 RBMY1BA6NDE4 496 aaKnown RBP16.76■□□□□ 0.27
BRD3-202ENST00000371834 RBMY1EA6NEQ0 496 aaKnown RBP16.76■□□□□ 0.27
BRD3-202ENST00000371834 RBMY1DP0C7P1 496 aaKnown RBP16.76■□□□□ 0.27
BRD3-202ENST00000371834 RNF152Q8N8N0 203 aa16.76■□□□□ 0.27
BRD3-202ENST00000371834 AMELXQ99217 191 aa16.76■□□□□ 0.27
BRD3-202ENST00000371834 J3QQQ9 107 aa16.75■□□□□ 0.27
BRD3-202ENST00000371834 ETDBQ3ZM63 59 aa16.75■□□□□ 0.27
BRD3-202ENST00000371834 GAGE13Q4V321 117 aa16.75■□□□□ 0.27
BRD3-202ENST00000371834 PRO0461Q9UI25 63 aa16.75■□□□□ 0.27
BRD3-202ENST00000371834 ABCA12Q86UK0 2595 aa16.75■□□□□ 0.27
BRD3-202ENST00000371834 NFE4Q86UQ8 179 aa16.74■□□□□ 0.27
BRD3-202ENST00000371834 IGHV3-64A0A075B6Q5 118 aa16.74■□□□□ 0.27
BRD3-202ENST00000371834 TSPAN13O95857 204 aa16.74■□□□□ 0.27
BRD3-202ENST00000371834 H3BMM0 161 aa16.73■□□□□ 0.27
BRD3-202ENST00000371834 Q9UF83 564 aa16.73■□□□□ 0.27
BRD3-202ENST00000371834 IGLV4-3A0A075B6K6 122 aa16.72■□□□□ 0.27
BRD3-202ENST00000371834 TMEM61Q8N0U2 210 aa16.72■□□□□ 0.27
BRD3-202ENST00000371834 SLC25A29Q8N8R3 303 aa16.72■□□□□ 0.27
BRD3-202ENST00000371834 BBC3Q96PG8 261 aaPredicted RBP16.72■□□□□ 0.27
BRD3-202ENST00000371834 A0A0J9YXV3 536 aa16.72■□□□□ 0.27
BRD3-202ENST00000371834 IGHV3-30P01768 117 aa16.72■□□□□ 0.27
BRD3-202ENST00000371834 IGHV3-30-5P0DP03 117 aa16.72■□□□□ 0.27
BRD3-202ENST00000371834 LGALS3P17931 250 aaKnown RBP16.72■□□□□ 0.27
BRD3-202ENST00000371834 USP24Q9UPU5 2620 aa16.71■□□□□ 0.27
BRD3-202ENST00000371834 TMEM223A0PJW6 202 aa16.71■□□□□ 0.27
BRD3-202ENST00000371834 KHDC1LQ5JSQ8 128 aa16.71■□□□□ 0.27
BRD3-202ENST00000371834 NAV2Q8IVL1 2488 aa16.71■□□□□ 0.26
BRD3-202ENST00000371834 LOC107984156A0A0G2JMH3 177 aa16.7■□□□□ 0.26
BRD3-202ENST00000371834 ZNF22P17026 224 aaPredicted RBP16.7■□□□□ 0.26
BRD3-202ENST00000371834 NDUFA11Q86Y39 141 aa16.7■□□□□ 0.26
BRD3-202ENST00000371834 ARL17AQ8IVW1 177 aa16.7■□□□□ 0.26
BRD3-202ENST00000371834 ZNF469Q96JG9 3925 aaPredicted RBP16.7■□□□□ 0.26
BRD3-202ENST00000371834 VCX2Q9H322 139 aa16.7■□□□□ 0.26
BRD3-202ENST00000371834 MYO9AB2RTY4 2548 aa16.7■□□□□ 0.26
BRD3-202ENST00000371834 CEMP1Q6PRD7 247 aaPredicted RBP16.69■□□□□ 0.26
BRD3-202ENST00000371834 Q6ZSN1 163 aa16.69■□□□□ 0.26
BRD3-202ENST00000371834 SPAG8Q99932 426 aaPredicted RBP16.69■□□□□ 0.26
BRD3-202ENST00000371834 RHODO00212 210 aa16.68■□□□□ 0.26
BRD3-202ENST00000371834 CFC1BP0CG36 223 aa16.68■□□□□ 0.26
BRD3-202ENST00000371834 CFC1P0CG37 223 aa16.68■□□□□ 0.26
BRD3-202ENST00000371834 Q5PR19 223 aa16.68■□□□□ 0.26
BRD3-202ENST00000371834 LEPROTO15243 131 aa16.67■□□□□ 0.26
BRD3-202ENST00000371834 DLX4Q92988 240 aaPredicted RBP16.67■□□□□ 0.26
BRD3-202ENST00000371834 FAM104AQ969W3 186 aa16.67■□□□□ 0.26
BRD3-202ENST00000371834 UBR5O95071 2799 aaPredicted RBP16.67■□□□□ 0.26
BRD3-202ENST00000371834 A8MTW9 85 aa16.67■□□□□ 0.26
BRD3-202ENST00000371834 PSMB2P49721 201 aa16.67■□□□□ 0.26
BRD3-202ENST00000371834 CD28P10747 220 aa16.66■□□□□ 0.26
BRD3-202ENST00000371834 RNASE13Q5GAN3 156 aaKnown RBP16.66■□□□□ 0.26
BRD3-202ENST00000371834 NACAE9PAV3 2078 aa16.66■□□□□ 0.26
BRD3-202ENST00000371834 AKAP9Q99996 3911 aa16.66■□□□□ 0.26
BRD3-202ENST00000371834 INSL3P51460 131 aa16.66■□□□□ 0.26
BRD3-202ENST00000371834 Q8N2B8 174 aa16.65■□□□□ 0.26
BRD3-202ENST00000371834 MAP6D1Q9H9H5 199 aa16.65■□□□□ 0.26
BRD3-202ENST00000371834 M0R2P5 195 aa16.65■□□□□ 0.26
BRD3-202ENST00000371834 TNFRSF18Q9Y5U5 241 aa16.65■□□□□ 0.26
BRD3-202ENST00000371834 SMCPP49901 116 aaPredicted RBP16.64■□□□□ 0.25
BRD3-202ENST00000371834 UBE2D3P61077 147 aa16.64■□□□□ 0.25
BRD3-202ENST00000371834 UBE2D2P62837 147 aa16.64■□□□□ 0.25
BRD3-202ENST00000371834 Q96MF0 132 aa16.64■□□□□ 0.25
BRD3-202ENST00000371834 PEMTQ9UBM1 199 aa16.64■□□□□ 0.25
BRD3-202ENST00000371834 TSSC4Q9Y5U2 329 aaPredicted RBP16.64■□□□□ 0.25
BRD3-202ENST00000371834 DEFB113Q30KQ7 82 aa16.64■□□□□ 0.25
BRD3-202ENST00000371834 EDA2RQ9HAV5 297 aa16.64■□□□□ 0.25
BRD3-202ENST00000371834 PRRC2AP48634 2157 aaKnown RBP16.64■□□□□ 0.25
BRD3-202ENST00000371834 TLN2Q9Y4G6 2542 aa16.63■□□□□ 0.25
BRD3-202ENST00000371834 DYNLRB2Q8TF09 96 aa16.63■□□□□ 0.25
BRD3-202ENST00000371834 C4orf3Q8WVX3 66 aa16.63■□□□□ 0.25
BRD3-202ENST00000371834 SPXQ9BT56 116 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms