RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 EGFEM1PQ0D2K5 195 aa2.57□□□□□ -2
MCF2-202ENST00000370573 RBMY1FQ15415 496 aaKnown RBP2.57□□□□□ -2
MCF2-202ENST00000370573 IBA57Q5T440 356 aaKnown RBP2.57□□□□□ -2
MCF2-202ENST00000370573 FAM162BQ5T6X4 162 aa2.57□□□□□ -2
MCF2-202ENST00000370573 GFI1BQ5VTD9 330 aa2.57□□□□□ -2
MCF2-202ENST00000370573 NDFIP1Q9BT67 221 aa2.57□□□□□ -2
MCF2-202ENST00000370573 TRAV12-3A0A0B4J271 114 aa2.56□□□□□ -2
MCF2-202ENST00000370573 IGKV3D-20A0A0C4DH25 116 aa2.56□□□□□ -2
MCF2-202ENST00000370573 C7orf71A4D174 169 aa2.56□□□□□ -2
MCF2-202ENST00000370573 ZNF705GA8MUZ8 300 aaPredicted RBP2.56□□□□□ -2
MCF2-202ENST00000370573 H7BYZ3 331 aa2.56□□□□□ -2
MCF2-202ENST00000370573 P01737 135 aa2.56□□□□□ -2
MCF2-202ENST00000370573 PRM2P04554 102 aa2.56□□□□□ -2
MCF2-202ENST00000370573 Q6AWC8 147 aa2.56□□□□□ -2
MCF2-202ENST00000370573 GTSF1Q8WW33 167 aa2.56□□□□□ -2
MCF2-202ENST00000370573 RPP21Q9H633 154 aaKnown RBP2.56□□□□□ -2
MCF2-202ENST00000370573 TMSB15BA0A087X1C1 80 aa2.56□□□□□ -2
MCF2-202ENST00000370573 SMIM27A0A1W2PRY6 76 aa2.56□□□□□ -2
MCF2-202ENST00000370573 GRIFINA4D1Z8 144 aa2.56□□□□□ -2
MCF2-202ENST00000370573 TMEM189A5PLL7 270 aa2.56□□□□□ -2
MCF2-202ENST00000370573 GNRH2O43555 120 aa2.56□□□□□ -2
MCF2-202ENST00000370573 TSPOP30536 169 aa2.56□□□□□ -2
MCF2-202ENST00000370573 TCL1AP56279 114 aa2.56□□□□□ -2
MCF2-202ENST00000370573 GAGE5Q13069 117 aa2.56□□□□□ -2
MCF2-202ENST00000370573 GAGE6Q13070 117 aa2.56□□□□□ -2
MCF2-202ENST00000370573 ELOBQ15370 118 aa2.56□□□□□ -2
MCF2-202ENST00000370573 OCIAD2Q56VL3 154 aa2.56□□□□□ -2
MCF2-202ENST00000370573 MUC21Q5SSG8 566 aa2.56□□□□□ -2
MCF2-202ENST00000370573 GTSCR1Q86UQ5 136 aa2.56□□□□□ -2
MCF2-202ENST00000370573 OR4C5Q8NGB2 326 aa2.56□□□□□ -2
MCF2-202ENST00000370573 IL36BQ9NZH7 164 aa2.56□□□□□ -2
MCF2-202ENST00000370573 XCL2Q9UBD3 114 aa2.56□□□□□ -2
MCF2-202ENST00000370573 URGCP-MRPS24S4R325 110 aa2.56□□□□□ -2
MCF2-202ENST00000370573 TRAV21A0A0B4J279 112 aa2.55□□□□□ -2
MCF2-202ENST00000370573 AMBPP02760 352 aa2.55□□□□□ -2
MCF2-202ENST00000370573 ORM1P02763 201 aa2.55□□□□□ -2
MCF2-202ENST00000370573 PRSS2P07478 247 aa2.55□□□□□ -2
MCF2-202ENST00000370573 CXCL1P09341 107 aa2.55□□□□□ -2
MCF2-202ENST00000370573 SMIM17P0DL12 118 aa2.55□□□□□ -2
MCF2-202ENST00000370573 C1orf158Q8N1D5 194 aa2.55□□□□□ -2
MCF2-202ENST00000370573 TSKUQ8WUA8 353 aa2.55□□□□□ -2
MCF2-202ENST00000370573 PYGO2Q9BRQ0 406 aa2.55□□□□□ -2
MCF2-202ENST00000370573 TP53TG3Q9ULZ0 132 aa2.55□□□□□ -2
MCF2-202ENST00000370573 MRPS16Q9Y3D3 137 aaKnown RBP2.55□□□□□ -2
MCF2-202ENST00000370573 A8MWL6 223 aa2.55□□□□□ -2
MCF2-202ENST00000370573 PRB2P02812 416 aaPredicted RBP2.55□□□□□ -2
MCF2-202ENST00000370573 TRGC1P0CF51 173 aa2.55□□□□□ -2
MCF2-202ENST00000370573 TEX43Q6ZNM6 134 aa2.55□□□□□ -2
MCF2-202ENST00000370573 CSNK1G2-AS1Q8NCQ2 148 aa2.55□□□□□ -2
MCF2-202ENST00000370573 NUP35Q8NFH5 326 aa2.55□□□□□ -2
MCF2-202ENST00000370573 ZNF479Q96JC4 524 aa2.55□□□□□ -2
MCF2-202ENST00000370573 PGLYRP4Q96LB8 373 aa2.55□□□□□ -2
MCF2-202ENST00000370573 IGHV1OR15-1A0A075B7D0 117 aa2.55□□□□□ -2
MCF2-202ENST00000370573 MUC21A0A0G2JKD1 596 aa2.55□□□□□ -2
MCF2-202ENST00000370573 MUC21A0A140T8X8 626 aa2.55□□□□□ -2
MCF2-202ENST00000370573 HIGD1CA8MV81 97 aa2.55□□□□□ -2
MCF2-202ENST00000370573 CCL25O15444 150 aa2.55□□□□□ -2
MCF2-202ENST00000370573 RS1O15537 224 aa2.55□□□□□ -2
MCF2-202ENST00000370573 SPINK4O60575 86 aa2.55□□□□□ -2
MCF2-202ENST00000370573 TYMSP04818 313 aa2.55□□□□□ -2
MCF2-202ENST00000370573 IGLC6P0CF74 106 aa2.55□□□□□ -2
MCF2-202ENST00000370573 AZU1P20160 251 aa2.55□□□□□ -2
MCF2-202ENST00000370573 FOXA3P55318 350 aaPredicted RBP2.55□□□□□ -2
MCF2-202ENST00000370573 TDRG1Q3Y452 100 aa2.55□□□□□ -2
MCF2-202ENST00000370573 KPRPQ5T749 579 aaPredicted RBP2.55□□□□□ -2
MCF2-202ENST00000370573 MORN3Q6PF18 240 aaPredicted RBP2.55□□□□□ -2
MCF2-202ENST00000370573 LYZL1Q6UWQ5 148 aa2.55□□□□□ -2
MCF2-202ENST00000370573 ZNF705AQ6ZN79 300 aaPredicted RBP2.55□□□□□ -2
MCF2-202ENST00000370573 GFRA4Q9GZZ7 299 aa2.55□□□□□ -2
MCF2-202ENST00000370573 CST9LQ9H4G1 147 aa2.55□□□□□ -2
MCF2-202ENST00000370573 Q9HAA7 133 aa2.55□□□□□ -2
MCF2-202ENST00000370573 MDFICQ9P1T7 246 aa2.55□□□□□ -2
MCF2-202ENST00000370573 UQCR10Q9UDW1 63 aa2.55□□□□□ -2
MCF2-202ENST00000370573 LOC102724200A0A096LPH7 203 aaPredicted RBP2.54□□□□□ -2
MCF2-202ENST00000370573 IGHV3-16A0A0C4DH30 117 aa2.54□□□□□ -2
MCF2-202ENST00000370573 FAM231BA6NCW3 169 aa2.54□□□□□ -2
MCF2-202ENST00000370573 INSP01308 110 aa2.54□□□□□ -2
MCF2-202ENST00000370573 ARMS2P0C7Q2 107 aa2.54□□□□□ -2
MCF2-202ENST00000370573 RNASE3P12724 160 aaKnown RBP2.54□□□□□ -2
MCF2-202ENST00000370573 FER1L6-AS1Q8NA97 138 aa2.54□□□□□ -2
MCF2-202ENST00000370573 PRAC1Q96KF2 57 aa2.54□□□□□ -2
MCF2-202ENST00000370573 LINC01587Q99440 93 aa2.54□□□□□ -2
MCF2-202ENST00000370573 LINC00467Q9BRT7 94 aa2.54□□□□□ -2
MCF2-202ENST00000370573 SCRT2Q9NQ03 307 aa2.54□□□□□ -2
MCF2-202ENST00000370573 NAT8BQ9UHF3 227 aa2.54□□□□□ -2
MCF2-202ENST00000370573 MUC4Q99102 2169 aa2.54□□□□□ -2
MCF2-202ENST00000370573 IGKV2D-30A0A075B6S6 120 aa2.54□□□□□ -2
MCF2-202ENST00000370573 IGHV3OR16-12A0A075B7B8 117 aa2.54□□□□□ -2
MCF2-202ENST00000370573 A0A1B0GXF2 115 aa2.54□□□□□ -2
MCF2-202ENST00000370573 H3BVH4 76 aa2.54□□□□□ -2
MCF2-202ENST00000370573 K7EIL1 84 aa2.54□□□□□ -2
MCF2-202ENST00000370573 SNAI2O43623 268 aa2.54□□□□□ -2
MCF2-202ENST00000370573 TRGC2P03986 189 aa2.54□□□□□ -2
MCF2-202ENST00000370573 ESDP10768 282 aa2.54□□□□□ -2
MCF2-202ENST00000370573 HTN1P15515 57 aa2.54□□□□□ -2
MCF2-202ENST00000370573 CTRLP40313 264 aa2.54□□□□□ -2
MCF2-202ENST00000370573 MRPL54Q6P161 138 aaKnown RBP2.54□□□□□ -2
MCF2-202ENST00000370573 NIT1Q86X76 327 aa2.54□□□□□ -2
MCF2-202ENST00000370573 OR11H2Q8NH07 326 aa2.54□□□□□ -2
MCF2-202ENST00000370573 OR10AG1Q8NH19 301 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms