RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 IGHV3-30P01768 117 aa9.71□□□□□ -0.86
HCFC1-202ENST00000369984 IGHV3-33P01772 117 aa9.71□□□□□ -0.86
HCFC1-202ENST00000369984 IGHV3-30-3P0DP02 117 aa9.71□□□□□ -0.86
HCFC1-202ENST00000369984 IGHV3-30-5P0DP03 117 aa9.71□□□□□ -0.86
HCFC1-202ENST00000369984 TRBV10-2A0A0K0K1G8 114 aa9.7□□□□□ -0.86
HCFC1-202ENST00000369984 ATP6V0E2Q8NHE4 81 aa9.7□□□□□ -0.86
HCFC1-202ENST00000369984 PROK2Q9HC23 129 aa9.7□□□□□ -0.86
HCFC1-202ENST00000369984 C20orf197Q8N268 126 aa9.69□□□□□ -0.86
HCFC1-202ENST00000369984 HHLA3Q9XRX5 114 aa9.69□□□□□ -0.86
HCFC1-202ENST00000369984 NDUFA1O15239 70 aa9.69□□□□□ -0.86
HCFC1-202ENST00000369984 RPL39P62891 51 aaKnown RBP9.69□□□□□ -0.86
HCFC1-202ENST00000369984 C9orf66Q5T8R8 295 aa9.69□□□□□ -0.86
HCFC1-202ENST00000369984 KAAG1Q9UBP8 84 aa9.69□□□□□ -0.86
HCFC1-202ENST00000369984 IGFL3Q6UXB1 125 aa9.69□□□□□ -0.86
HCFC1-202ENST00000369984 TOMM6Q96B49 74 aa9.69□□□□□ -0.86
HCFC1-202ENST00000369984 FXYD2P54710 66 aa9.68□□□□□ -0.86
HCFC1-202ENST00000369984 SDIM1Q6ZPB5 146 aa9.68□□□□□ -0.86
HCFC1-202ENST00000369984 LINC00173Q6ZV60 143 aa9.68□□□□□ -0.86
HCFC1-202ENST00000369984 C14orf177Q52M58 125 aa9.68□□□□□ -0.86
HCFC1-202ENST00000369984 A0A0J9YWU9 116 aa9.68□□□□□ -0.86
HCFC1-202ENST00000369984 LOXL1Q08397 574 aaPredicted RBP9.68□□□□□ -0.86
HCFC1-202ENST00000369984 DIRC1Q969H9 104 aa9.68□□□□□ -0.86
HCFC1-202ENST00000369984 SPART-AS1P0CW21 52 aa9.68□□□□□ -0.86
HCFC1-202ENST00000369984 PTPRSQ13332 1948 aa9.67□□□□□ -0.86
HCFC1-202ENST00000369984 DEFB112Q30KQ8 113 aa9.67□□□□□ -0.86
HCFC1-202ENST00000369984 UQCRQO14949 82 aa9.67□□□□□ -0.86
HCFC1-202ENST00000369984 ATP5EP56381 51 aaPredicted RBP9.67□□□□□ -0.86
HCFC1-202ENST00000369984 GPHB5Q86YW7 130 aa9.67□□□□□ -0.86
HCFC1-202ENST00000369984 RSPO1Q2MKA7 263 aaPredicted RBP9.66□□□□□ -0.86
HCFC1-202ENST00000369984 LECT2O14960 151 aa9.66□□□□□ -0.86
HCFC1-202ENST00000369984 RITA1Q96K30 269 aa9.66□□□□□ -0.86
HCFC1-202ENST00000369984 NPBQ8NG41 125 aa9.66□□□□□ -0.86
HCFC1-202ENST00000369984 RETNQ9HD89 108 aa9.66□□□□□ -0.86
HCFC1-202ENST00000369984 GP9P14770 177 aa9.65□□□□□ -0.86
HCFC1-202ENST00000369984 A0A0J9YXV3 536 aa9.65□□□□□ -0.86
HCFC1-202ENST00000369984 PIFOQ8TCI5 191 aa9.65□□□□□ -0.86
HCFC1-202ENST00000369984 C20orf173Q96LM9 149 aa9.65□□□□□ -0.86
HCFC1-202ENST00000369984 HIGD1BQ9P298 99 aa9.65□□□□□ -0.86
HCFC1-202ENST00000369984 IGLV3-1P01715 115 aa9.65□□□□□ -0.86
HCFC1-202ENST00000369984 Q8N1Y9 231 aa9.65□□□□□ -0.86
HCFC1-202ENST00000369984 C10orf105Q8TEF2 133 aa9.65□□□□□ -0.87
HCFC1-202ENST00000369984 GTSF1Q8WW33 167 aa9.65□□□□□ -0.87
HCFC1-202ENST00000369984 F8W735 103 aaPredicted RBP9.65□□□□□ -0.87
HCFC1-202ENST00000369984 MYO18BQ8IUG5 2567 aa9.64□□□□□ -0.87
HCFC1-202ENST00000369984 BPY2O14599 106 aa9.64□□□□□ -0.87
HCFC1-202ENST00000369984 NUPR1O60356 82 aa9.64□□□□□ -0.87
HCFC1-202ENST00000369984 ESM1Q9NQ30 184 aa9.64□□□□□ -0.87
HCFC1-202ENST00000369984 GPR179Q6PRD1 2367 aa9.64□□□□□ -0.87
HCFC1-202ENST00000369984 ZNF524Q96C55 264 aa9.64□□□□□ -0.87
HCFC1-202ENST00000369984 E9PLD3 99 aa9.64□□□□□ -0.87
HCFC1-202ENST00000369984 HIST2H2BDQ6DRA6 164 aa9.64□□□□□ -0.87
HCFC1-202ENST00000369984 PRSS33Q8NF86 280 aa9.64□□□□□ -0.87
HCFC1-202ENST00000369984 MSRB1Q9NZV6 116 aa9.64□□□□□ -0.87
HCFC1-202ENST00000369984 I3L2K1 104 aa9.64□□□□□ -0.87
HCFC1-202ENST00000369984 WFDC10BQ8IUB3 73 aa9.63□□□□□ -0.87
HCFC1-202ENST00000369984 FGF23Q9GZV9 251 aaPredicted RBP9.63□□□□□ -0.87
HCFC1-202ENST00000369984 C16orf54Q6UWD8 224 aa9.63□□□□□ -0.87
HCFC1-202ENST00000369984 C11orf86A6NJI1 115 aa9.63□□□□□ -0.87
HCFC1-202ENST00000369984 PTH2Q96A98 100 aa9.63□□□□□ -0.87
HCFC1-202ENST00000369984 IGLC6P0CF74 106 aa9.62□□□□□ -0.87
HCFC1-202ENST00000369984 CENPVL3A0A0U1RRI6 287 aa9.62□□□□□ -0.87
HCFC1-202ENST00000369984 K7EIM0 57 aa9.62□□□□□ -0.87
HCFC1-202ENST00000369984 IGHV7-81A0A0B4J1V7 117 aa9.62□□□□□ -0.87
HCFC1-202ENST00000369984 TIMM17BO60830 172 aa9.62□□□□□ -0.87
HCFC1-202ENST00000369984 AJUBAQ96IF1 538 aa9.62□□□□□ -0.87
HCFC1-202ENST00000369984 LRP4O75096 1905 aa9.62□□□□□ -0.87
HCFC1-202ENST00000369984 MT-ATP8P03928 68 aa9.62□□□□□ -0.87
HCFC1-202ENST00000369984 IGLV11-55A0A075B6I3 123 aa9.62□□□□□ -0.87
HCFC1-202ENST00000369984 COA6Q5JTJ3 125 aaKnown RBP9.62□□□□□ -0.87
HCFC1-202ENST00000369984 IGHV4-30-2A0A087WSY4 118 aa9.61□□□□□ -0.87
HCFC1-202ENST00000369984 CTSZQ9UBR2 303 aa9.61□□□□□ -0.87
HCFC1-202ENST00000369984 IGHV4-38-2P0DP08 117 aa9.61□□□□□ -0.87
HCFC1-202ENST00000369984 SPRNQ5BIV9 151 aa9.61□□□□□ -0.87
HCFC1-202ENST00000369984 LINC00643Q86TS7 51 aa9.61□□□□□ -0.87
HCFC1-202ENST00000369984 MIR7-3HGQ8N6C7 128 aa9.61□□□□□ -0.87
HCFC1-202ENST00000369984 FAM215AQ9Y5M1 114 aa9.61□□□□□ -0.87
HCFC1-202ENST00000369984 PMAIP1Q13794 54 aa9.61□□□□□ -0.87
HCFC1-202ENST00000369984 SNURFQ9Y675 71 aa9.61□□□□□ -0.87
HCFC1-202ENST00000369984 NDUFC1O43677 76 aa9.6□□□□□ -0.87
HCFC1-202ENST00000369984 SCXQ7RTU7 201 aa9.6□□□□□ -0.87
HCFC1-202ENST00000369984 LY6G6EA0A0G2JKS1 128 aa9.6□□□□□ -0.87
HCFC1-202ENST00000369984 U3KQA8 63 aa9.6□□□□□ -0.87
HCFC1-202ENST00000369984 ODF1Q14990 250 aa9.6□□□□□ -0.87
HCFC1-202ENST00000369984 C5orf56Q8N8D9 126 aa9.6□□□□□ -0.87
HCFC1-202ENST00000369984 C11orf53Q8IXP5 236 aa9.6□□□□□ -0.87
HCFC1-202ENST00000369984 H3BT86 120 aa9.6□□□□□ -0.87
HCFC1-202ENST00000369984 PIK3CD-AS1Q5SR53 167 aa9.6□□□□□ -0.87
HCFC1-202ENST00000369984 IGHV1-58A0A0C4DH39 117 aa9.59□□□□□ -0.87
HCFC1-202ENST00000369984 SPAG11BQ08648 103 aa9.59□□□□□ -0.87
HCFC1-202ENST00000369984 TEX49A0A1B0GTD5 131 aa9.59□□□□□ -0.87
HCFC1-202ENST00000369984 ENHOQ6UWT2 76 aa9.59□□□□□ -0.87
HCFC1-202ENST00000369984 CTSGP08311 255 aa9.59□□□□□ -0.87
HCFC1-202ENST00000369984 CTRLP40313 264 aa9.59□□□□□ -0.87
HCFC1-202ENST00000369984 C2orf70A6NJV1 201 aa9.58□□□□□ -0.88
HCFC1-202ENST00000369984 BLCAPP62952 87 aa9.58□□□□□ -0.88
HCFC1-202ENST00000369984 TCL1BO95988 128 aa9.58□□□□□ -0.88
HCFC1-202ENST00000369984 HIVEP2P31629 2446 aa9.58□□□□□ -0.88
HCFC1-202ENST00000369984 COX7BP24311 80 aa9.58□□□□□ -0.88
HCFC1-202ENST00000369984 NDUFA11Q86Y39 141 aa9.58□□□□□ -0.88
HCFC1-202ENST00000369984 RNF138Q8WVD3 245 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms