RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 TMEM258P61165 79 aa13.67□□□□□ -0.22
SNX27-203ENST00000368843 C14orf177Q52M58 125 aa13.67□□□□□ -0.22
SNX27-203ENST00000368843 A0A1B0GX51 115 aa13.67□□□□□ -0.22
SNX27-203ENST00000368843 P0DMU3 169 aa13.67□□□□□ -0.22
SNX27-203ENST00000368843 FAM231AP0DMU4 169 aa13.67□□□□□ -0.22
SNX27-203ENST00000368843 FAM231CP0DMU5 169 aa13.67□□□□□ -0.22
SNX27-203ENST00000368843 MP68P56378 58 aa13.67□□□□□ -0.22
SNX27-203ENST00000368843 LRRC75A-AS1Q8N1F1 130 aa13.67□□□□□ -0.22
SNX27-203ENST00000368843 A0A0J9YX75 114 aa13.67□□□□□ -0.22
SNX27-203ENST00000368843 H3BQ85 93 aa13.66□□□□□ -0.22
SNX27-203ENST00000368843 FAM167A-AS1Q96KT0 104 aa13.66□□□□□ -0.22
SNX27-203ENST00000368843 SPTAN1Q13813 2472 aaKnown RBP13.66□□□□□ -0.22
SNX27-203ENST00000368843 FBXL19-AS1Q494R0 122 aa13.66□□□□□ -0.22
SNX27-203ENST00000368843 TNFRSF13BO14836 293 aaPredicted RBP13.65□□□□□ -0.22
SNX27-203ENST00000368843 CRYGDP07320 174 aa13.65□□□□□ -0.22
SNX27-203ENST00000368843 IL15RAQ13261 267 aa13.65□□□□□ -0.22
SNX27-203ENST00000368843 Q6YL49 198 aa13.65□□□□□ -0.22
SNX27-203ENST00000368843 TP53TG3Q9ULZ0 132 aa13.65□□□□□ -0.22
SNX27-203ENST00000368843 MIR7-3HGQ8N6C7 128 aa13.65□□□□□ -0.22
SNX27-203ENST00000368843 SVIPQ8NHG7 77 aa13.65□□□□□ -0.22
SNX27-203ENST00000368843 MED14OSP0DP75 135 aa13.65□□□□□ -0.23
SNX27-203ENST00000368843 LINC00269Q8N2A0 174 aa13.64□□□□□ -0.23
SNX27-203ENST00000368843 MSMPQ1L6U9 139 aa13.64□□□□□ -0.23
SNX27-203ENST00000368843 TRBV6-1A0A0K0K1D8 114 aa13.64□□□□□ -0.23
SNX27-203ENST00000368843 ANKRD39Q53RE8 183 aa13.64□□□□□ -0.23
SNX27-203ENST00000368843 LINC01548A6NM66 108 aa13.64□□□□□ -0.23
SNX27-203ENST00000368843 LECT2O14960 151 aa13.64□□□□□ -0.23
SNX27-203ENST00000368843 PSMB8P28062 276 aa13.64□□□□□ -0.23
SNX27-203ENST00000368843 NOTCH3Q9UM47 2321 aa13.63□□□□□ -0.23
SNX27-203ENST00000368843 SPRY4Q9C004 299 aa13.63□□□□□ -0.23
SNX27-203ENST00000368843 GPR179Q6PRD1 2367 aa13.63□□□□□ -0.23
SNX27-203ENST00000368843 DEFB131BA0A096LNP1 70 aa13.63□□□□□ -0.23
SNX27-203ENST00000368843 ZNF843Q8N446 348 aa13.63□□□□□ -0.23
SNX27-203ENST00000368843 FAM236AA0A1B0GUQ0 79 aa13.63□□□□□ -0.23
SNX27-203ENST00000368843 FAM236BA0A1B0GV22 79 aa13.63□□□□□ -0.23
SNX27-203ENST00000368843 IGKV2D-26A0A0A0MRZ7 120 aa13.62□□□□□ -0.23
SNX27-203ENST00000368843 IGLV2-14P01704 120 aa13.62□□□□□ -0.23
SNX27-203ENST00000368843 FAM222AQ5U5X8 452 aa13.62□□□□□ -0.23
SNX27-203ENST00000368843 NBASA2RRP1 2371 aa13.62□□□□□ -0.23
SNX27-203ENST00000368843 A0A0B4J2C4 111 aa13.62□□□□□ -0.23
SNX27-203ENST00000368843 CCDC140Q96MF4 163 aa13.62□□□□□ -0.23
SNX27-203ENST00000368843 Q6ZUT4 128 aa13.61□□□□□ -0.23
SNX27-203ENST00000368843 Q6ZTI0 123 aa13.61□□□□□ -0.23
SNX27-203ENST00000368843 LGALS9O00182 355 aa13.6□□□□□ -0.23
SNX27-203ENST00000368843 Q6ZSR3 168 aa13.6□□□□□ -0.23
SNX27-203ENST00000368843 LMO4P61968 165 aa13.6□□□□□ -0.23
SNX27-203ENST00000368843 REG3AQ06141 175 aa13.6□□□□□ -0.23
SNX27-203ENST00000368843 COX7BP24311 80 aa13.6□□□□□ -0.23
SNX27-203ENST00000368843 FXYD2P54710 66 aa13.6□□□□□ -0.23
SNX27-203ENST00000368843 LYPD6BQ8NI32 183 aa13.6□□□□□ -0.23
SNX27-203ENST00000368843 HIGD2AQ9BW72 106 aa13.59□□□□□ -0.23
SNX27-203ENST00000368843 FRMD6-AS1P0C7T7 363 aa13.59□□□□□ -0.23
SNX27-203ENST00000368843 CTRLP40313 264 aa13.59□□□□□ -0.23
SNX27-203ENST00000368843 C11orf86A6NJI1 115 aa13.59□□□□□ -0.23
SNX27-203ENST00000368843 IGKV4-1P06312 121 aa13.59□□□□□ -0.23
SNX27-203ENST00000368843 WFDC2Q14508 124 aa13.59□□□□□ -0.23
SNX27-203ENST00000368843 LINC00482Q8N8I6 264 aa13.59□□□□□ -0.23
SNX27-203ENST00000368843 NFE4Q86UQ8 179 aa13.59□□□□□ -0.23
SNX27-203ENST00000368843 ARHGAP21Q5T5U3 1957 aa13.59□□□□□ -0.23
SNX27-203ENST00000368843 COL4A4P53420 1690 aaPredicted RBP13.59□□□□□ -0.23
SNX27-203ENST00000368843 LY6G6DO95868 133 aa13.58□□□□□ -0.23
SNX27-203ENST00000368843 COL4A3Q01955 1670 aa13.58□□□□□ -0.24
SNX27-203ENST00000368843 A0A087WZ39 114 aa13.58□□□□□ -0.24
SNX27-203ENST00000368843 A0A0J9YWU9 116 aa13.58□□□□□ -0.24
SNX27-203ENST00000368843 CEP192Q8TEP8 1941 aa13.58□□□□□ -0.24
SNX27-203ENST00000368843 IGHV1-58A0A0C4DH39 117 aa13.58□□□□□ -0.24
SNX27-203ENST00000368843 SCXQ7RTU7 201 aa13.57□□□□□ -0.24
SNX27-203ENST00000368843 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.57□□□□□ -0.24
SNX27-203ENST00000368843 ODF3BA8MYP8 253 aa13.57□□□□□ -0.24
SNX27-203ENST00000368843 ZFAND2AQ8N6M9 145 aa13.57□□□□□ -0.24
SNX27-203ENST00000368843 SHISA2Q6UWI4 295 aa13.56□□□□□ -0.24
SNX27-203ENST00000368843 SHANK1Q9Y566 2161 aa13.56□□□□□ -0.24
SNX27-203ENST00000368843 LYRM9A8MSI8 78 aa13.56□□□□□ -0.24
SNX27-203ENST00000368843 SEC61GP60059 68 aa13.56□□□□□ -0.24
SNX27-203ENST00000368843 E9PLD3 99 aa13.55□□□□□ -0.24
SNX27-203ENST00000368843 FAM19A1Q7Z5A9 133 aa13.55□□□□□ -0.24
SNX27-203ENST00000368843 LTBP2Q14767 1821 aa13.55□□□□□ -0.24
SNX27-203ENST00000368843 TMEM256-PLSCR3K7ERE1 68 aa13.55□□□□□ -0.24
SNX27-203ENST00000368843 PLCE1Q9P212 2302 aa13.55□□□□□ -0.24
SNX27-203ENST00000368843 NCOA6Q14686 2063 aaPredicted RBP13.55□□□□□ -0.24
SNX27-203ENST00000368843 TRBV10-1A0A0K0K1A3 114 aa13.55□□□□□ -0.24
SNX27-203ENST00000368843 SMIM20Q8N5G0 67 aa13.55□□□□□ -0.24
SNX27-203ENST00000368843 DEFB114Q30KQ6 69 aa13.55□□□□□ -0.24
SNX27-203ENST00000368843 PTH2Q96A98 100 aa13.54□□□□□ -0.24
SNX27-203ENST00000368843 JMJD7-PLA2G4BH0Y9G9 81 aa13.54□□□□□ -0.24
SNX27-203ENST00000368843 MPLKIPQ8TAP9 179 aa13.54□□□□□ -0.24
SNX27-203ENST00000368843 LINC01620Q4KN68 170 aa13.54□□□□□ -0.24
SNX27-203ENST00000368843 MLST8Q9BVC4 326 aa13.53□□□□□ -0.24
SNX27-203ENST00000368843 M0R2N4 97 aa13.53□□□□□ -0.24
SNX27-203ENST00000368843 CHCHD10Q8WYQ3 142 aaPredicted RBP13.53□□□□□ -0.24
SNX27-203ENST00000368843 HRCT1Q6UXD1 115 aa13.53□□□□□ -0.24
SNX27-203ENST00000368843 PLA2G2EQ9NZK7 142 aa13.53□□□□□ -0.24
SNX27-203ENST00000368843 NUP210LQ5VU65 1888 aa13.53□□□□□ -0.24
SNX27-203ENST00000368843 IGLV2-18A0A075B6J9 118 aa13.53□□□□□ -0.24
SNX27-203ENST00000368843 SMIM9A6NGZ8 99 aa13.52□□□□□ -0.24
SNX27-203ENST00000368843 C20orf203Q8NBC4 194 aa13.52□□□□□ -0.24
SNX27-203ENST00000368843 TRAV23DV6A0A075B6W5 121 aa13.52□□□□□ -0.25
SNX27-203ENST00000368843 SLPIP03973 132 aa13.52□□□□□ -0.25
SNX27-203ENST00000368843 CRYGBP07316 175 aa13.52□□□□□ -0.25
SNX27-203ENST00000368843 FAM19A5Q7Z5A7 132 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 330.2 ms