RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 CXorf51AA0A1B0GTR3 108 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 HYPMO75409 117 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 ZNF324O75467 553 aaPredicted RBP2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 PROSCO94903 275 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 UBL3O95164 117 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 HLA-DQA1P01909 254 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 BSPH1Q075Z2 132 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 FOXF1Q12946 379 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 LYPD2Q6UXB3 125 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 TIFABQ6ZNK6 161 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 PCP2Q8IVA1 136 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 DEFB106AQ8N104 65 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 OR10G2Q8NGC3 310 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 CHCHD5Q9BSY4 110 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 NPCDR1Q9BY65 106 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 ST20Q9HBF5 79 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 EPDR1Q9UM22 224 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 APOBP04114 4563 aaKnown RBP2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 IGLV1-50A0A075B6I6 118 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 A0A087X002 238 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 IGHV3-35A0A0C4DH35 117 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 MDFIC2A0A1B0GVS7 189 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 CLPSL1A2RUU4 121 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 PRAC2D3DTV9 90 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 SLC25A14O95258 325 aaPredicted RBP2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 CFDP00746 253 aaPredicted RBP2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 SLC25A6P12236 298 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 POLR2JP52435 117 aaKnown RBP2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 CRIP2P52943 208 aaPredicted RBP2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 ATP5EP56381 51 aaPredicted RBP2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 RPL18Q07020 188 aaKnown RBP2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 DPPA3Q6W0C5 159 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 HEPN1Q6WQI6 88 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 CAMK2N1Q7Z7J9 78 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 DAND5Q8N907 189 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 CNEP1R1Q8N9A8 125 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 C15orf53Q8NAA6 179 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 VSTM2AQ8TAG5 236 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 C7orf33Q8WU49 177 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 S100A16Q96FQ6 103 aaKnown RBP2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 ZNF714Q96N38 554 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 OSTCQ9NRP0 149 aa2.47□□□□□ -2.01
ECHDC1-205ENST00000368295 NINQ8N4C6 2090 aa2.46□□□□□ -2.02
ECHDC1-205ENST00000368295 IGLV3-10A0A075B6K4 115 aa2.46□□□□□ -2.02
ECHDC1-205ENST00000368295 IGHV3-72A0A0B4J1Y9 119 aa2.46□□□□□ -2.02
ECHDC1-205ENST00000368295 IGKV1-12A0A0C4DH73 117 aa2.46□□□□□ -2.02
ECHDC1-205ENST00000368295 A8MWL6 223 aa2.46□□□□□ -2.02
ECHDC1-205ENST00000368295 H3BRM9 83 aa2.46□□□□□ -2.02
ECHDC1-205ENST00000368295 K7ERJ3 54 aa2.46□□□□□ -2.02
ECHDC1-205ENST00000368295 IGKV1-39P01597 117 aa2.46□□□□□ -2.02
ECHDC1-205ENST00000368295 IGKV1D-12P01611 117 aa2.46□□□□□ -2.02
ECHDC1-205ENST00000368295 CD3DP04234 171 aa2.46□□□□□ -2.02
ECHDC1-205ENST00000368295 IGKV1D-39P04432 117 aa2.46□□□□□ -2.02
ECHDC1-205ENST00000368295 RPL27AP46776 148 aaKnown RBP2.46□□□□□ -2.02
ECHDC1-205ENST00000368295 EFNA4P52798 201 aa2.46□□□□□ -2.02
ECHDC1-205ENST00000368295 NANOS2P60321 138 aaKnown RBP2.46□□□□□ -2.02
ECHDC1-205ENST00000368295 C12orf73Q69YU5 71 aa2.46□□□□□ -2.02
ECHDC1-205ENST00000368295 Q8N2B8 174 aa2.46□□□□□ -2.02
ECHDC1-205ENST00000368295 LSM10Q969L4 123 aaKnown RBP2.46□□□□□ -2.02
ECHDC1-205ENST00000368295 CHAC1Q9BUX1 264 aa2.46□□□□□ -2.02
ECHDC1-205ENST00000368295 CRCT1Q9UGL9 99 aa2.46□□□□□ -2.02
ECHDC1-205ENST00000368295 CACFD1Q9UGQ2 172 aa2.46□□□□□ -2.02
ECHDC1-205ENST00000368295 SNRNP200O75643 2136 aaKnown RBP2.46□□□□□ -2.02
ECHDC1-205ENST00000368295 DNAH2Q9P225 4427 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 IGLV3-12A0A075B6K2 115 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 IGKV1-6A0A0C4DH72 117 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 MUC21A0A0G2JKD1 596 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 SRRM5B3KS81 715 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 FAM72CH0Y354 149 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 OR1I1O60431 355 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 SERF1AO75920 110 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 IGHV3-23P01764 117 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 IGHV3-13P01766 116 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 IGLC2P0DOY2 106 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 IGLC3P0DOY3 106 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 NPPCP23582 126 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 UBE2AP49459 152 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 KRTAP27-1Q3LI81 207 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 FAM72DQ6L9T8 149 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 Q8N7P7 452 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 ITLN1Q8WWA0 313 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 SMDT1Q9H4I9 107 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 MED12LQ86YW9 2145 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 TET2Q6N021 2002 aaPredicted RBP2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 IGKV2D-30A0A075B6S6 120 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 IGHV3-43A0A0B4J1X8 118 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 A0A0J9YXY3 114 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 ASB16-AS1Q495Z4 193 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 MIR17HGQ75NE6 70 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 SBSPONQ8IVN8 264 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 OR5AS1Q8N127 324 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 FGF23Q9GZV9 251 aaPredicted RBP2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 SCRT2Q9NQ03 307 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 TAS2R4Q9NYW5 299 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 DHRS4-AS1Q9P1J3 65 aa2.45□□□□□ -2.02
ECHDC1-205ENST00000368295 SCN3AQ9NY46 2000 aa2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 IGHV7-4-1A0A0J9YVY3 117 aa2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 TRBV7-7A0A0K0K1E9 115 aa2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 A0A1B0GVY2 172 aa2.44□□□□□ -2.02
ECHDC1-205ENST00000368295 RBAKDNA6NC62 111 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms