RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 GAGE12FP0CL80 117 aa8.91□□□□□ -0.98
USF1-203ENST00000368021 GAGE12GP0CL81 117 aa8.91□□□□□ -0.98
USF1-203ENST00000368021 GAGE12IP0CL82 117 aa8.91□□□□□ -0.98
USF1-203ENST00000368021 RNASE4P34096 147 aaKnown RBP8.91□□□□□ -0.98
USF1-203ENST00000368021 HBBP68871 147 aa8.91□□□□□ -0.98
USF1-203ENST00000368021 GAGE4Q13068 117 aa8.91□□□□□ -0.98
USF1-203ENST00000368021 BEAN1Q3B7T3 259 aa8.91□□□□□ -0.98
USF1-203ENST00000368021 GAGE13Q4V321 117 aa8.91□□□□□ -0.98
USF1-203ENST00000368021 OXLD1Q5BKU9 147 aa8.91□□□□□ -0.98
USF1-203ENST00000368021 PGLYRP4Q96LB8 373 aa8.91□□□□□ -0.98
USF1-203ENST00000368021 C11orf21Q9P2W6 132 aa8.91□□□□□ -0.98
USF1-203ENST00000368021 A0A1B0GUT8 65 aa8.91□□□□□ -0.98
USF1-203ENST00000368021 SPINK4O60575 86 aa8.91□□□□□ -0.98
USF1-203ENST00000368021 IGLC6P0CF74 106 aa8.91□□□□□ -0.98
USF1-203ENST00000368021 C9orf66Q5T8R8 295 aa8.91□□□□□ -0.98
USF1-203ENST00000368021 TMSB15BA0A087X1C1 80 aa8.9□□□□□ -0.98
USF1-203ENST00000368021 KNCNA6PVL3 124 aa8.9□□□□□ -0.98
USF1-203ENST00000368021 FGF6P10767 208 aa8.9□□□□□ -0.98
USF1-203ENST00000368021 WFDC9Q8NEX5 89 aa8.9□□□□□ -0.98
USF1-203ENST00000368021 SS18L2Q9UHA2 77 aa8.9□□□□□ -0.98
USF1-203ENST00000368021 E9PLD3 99 aa8.89□□□□□ -0.99
USF1-203ENST00000368021 FRMD6-AS1P0C7T7 363 aa8.89□□□□□ -0.99
USF1-203ENST00000368021 MCRIP2Q9BUT9 160 aaKnown RBP8.89□□□□□ -0.99
USF1-203ENST00000368021 CNFNQ9BYD5 112 aa8.89□□□□□ -0.99
USF1-203ENST00000368021 IGKV3-20P01619 116 aa8.89□□□□□ -0.99
USF1-203ENST00000368021 SPINK13Q1W4C9 94 aa8.89□□□□□ -0.99
USF1-203ENST00000368021 LYZL1Q6UWQ5 148 aa8.89□□□□□ -0.99
USF1-203ENST00000368021 Q6ZQT7 251 aa8.89□□□□□ -0.99
USF1-203ENST00000368021 ARMS2P0C7Q2 107 aa8.88□□□□□ -0.99
USF1-203ENST00000368021 ASIPP42127 132 aa8.88□□□□□ -0.99
USF1-203ENST00000368021 RIGQ13278 110 aa8.88□□□□□ -0.99
USF1-203ENST00000368021 Q6ZUT4 128 aa8.88□□□□□ -0.99
USF1-203ENST00000368021 RNF183Q96D59 192 aa8.88□□□□□ -0.99
USF1-203ENST00000368021 TM2D2Q9BX73 214 aa8.88□□□□□ -0.99
USF1-203ENST00000368021 MAP1LC3AQ9H492 121 aa8.88□□□□□ -0.99
USF1-203ENST00000368021 APOMO95445 188 aa8.87□□□□□ -0.99
USF1-203ENST00000368021 FOXI1Q12951 378 aa8.87□□□□□ -0.99
USF1-203ENST00000368021 STHQ8IWL8 128 aa8.87□□□□□ -0.99
USF1-203ENST00000368021 TPPP3Q9BW30 176 aa8.87□□□□□ -0.99
USF1-203ENST00000368021 C19orf73Q9NVV2 129 aa8.87□□□□□ -0.99
USF1-203ENST00000368021 TRAV12-3A0A0B4J271 114 aa8.87□□□□□ -0.99
USF1-203ENST00000368021 RBMY1BA6NDE4 496 aaKnown RBP8.87□□□□□ -0.99
USF1-203ENST00000368021 RBMY1EA6NEQ0 496 aaKnown RBP8.87□□□□□ -0.99
USF1-203ENST00000368021 SNAI2O43623 268 aa8.87□□□□□ -0.99
USF1-203ENST00000368021 PRB2P02812 416 aaPredicted RBP8.87□□□□□ -0.99
USF1-203ENST00000368021 RBMY1DP0C7P1 496 aaKnown RBP8.87□□□□□ -0.99
USF1-203ENST00000368021 MED14OSP0DP75 135 aa8.87□□□□□ -0.99
USF1-203ENST00000368021 CAMPP49913 170 aa8.87□□□□□ -0.99
USF1-203ENST00000368021 ANXA2RQ3ZCQ2 193 aa8.87□□□□□ -0.99
USF1-203ENST00000368021 FAM159AQ6UWV7 190 aa8.87□□□□□ -0.99
USF1-203ENST00000368021 GATD1Q8NB37 220 aa8.87□□□□□ -0.99
USF1-203ENST00000368021 TRAV12-2A0A075B6T6 113 aa8.86□□□□□ -0.99
USF1-203ENST00000368021 M0QXV9 152 aa8.86□□□□□ -0.99
USF1-203ENST00000368021 CD7P09564 240 aa8.86□□□□□ -0.99
USF1-203ENST00000368021 TRPT1Q86TN4 253 aaKnown RBP8.86□□□□□ -0.99
USF1-203ENST00000368021 PPDPFLQ8WWR9 84 aa8.86□□□□□ -0.99
USF1-203ENST00000368021 EVI2AP22794 236 aa8.85□□□□□ -0.99
USF1-203ENST00000368021 ZNF493Q6ZR52 646 aa8.85□□□□□ -0.99
USF1-203ENST00000368021 AP5S1Q9NUS5 200 aa8.85□□□□□ -0.99
USF1-203ENST00000368021 GCSHP23434 173 aa8.84□□□□□ -0.99
USF1-203ENST00000368021 PTH2Q96A98 100 aa8.84□□□□□ -0.99
USF1-203ENST00000368021 IGHV4-4A0A075B6R2 117 aa8.84□□□□□ -0.99
USF1-203ENST00000368021 S100A4P26447 101 aaKnown RBP8.84□□□□□ -0.99
USF1-203ENST00000368021 CACNG7P62955 275 aa8.84□□□□□ -0.99
USF1-203ENST00000368021 MRPL23Q16540 153 aaKnown RBP8.84□□□□□ -0.99
USF1-203ENST00000368021 GTSCR1Q86UQ5 136 aa8.84□□□□□ -0.99
USF1-203ENST00000368021 IGHV1OR15-1A0A075B7D0 117 aa8.83□□□□□ -1
USF1-203ENST00000368021 H3BVH4 76 aa8.83□□□□□ -1
USF1-203ENST00000368021 RHODO00212 210 aa8.83□□□□□ -1
USF1-203ENST00000368021 TWIST1Q15672 202 aa8.83□□□□□ -1
USF1-203ENST00000368021 SMIM20Q8N5G0 67 aa8.83□□□□□ -1
USF1-203ENST00000368021 SYT8Q8NBV8 401 aa8.83□□□□□ -1
USF1-203ENST00000368021 RAB37Q96AX2 223 aa8.83□□□□□ -1
USF1-203ENST00000368021 PRKDCP78527 4128 aaKnown RBP8.83□□□□□ -1
USF1-203ENST00000368021 B5MCH6 92 aa8.82□□□□□ -1
USF1-203ENST00000368021 GNRH2O43555 120 aa8.82□□□□□ -1
USF1-203ENST00000368021 INSP01308 110 aa8.82□□□□□ -1
USF1-203ENST00000368021 RNASE3P12724 160 aaKnown RBP8.82□□□□□ -1
USF1-203ENST00000368021 FXYD7P58549 80 aa8.82□□□□□ -1
USF1-203ENST00000368021 ETDBQ3ZM63 59 aa8.82□□□□□ -1
USF1-203ENST00000368021 URB1-AS1Q96HZ7 61 aa8.82□□□□□ -1
USF1-203ENST00000368021 LINC00467Q9BRT7 94 aa8.82□□□□□ -1
USF1-203ENST00000368021 DNAH3Q8TD57 4116 aa8.82□□□□□ -1
USF1-203ENST00000368021 A0A1B0GWB2 263 aa8.82□□□□□ -1
USF1-203ENST00000368021 RBMY1A1P0DJD3 496 aaKnown RBP8.82□□□□□ -1
USF1-203ENST00000368021 RBMY1CP0DJD4 496 aa8.82□□□□□ -1
USF1-203ENST00000368021 RBMY1FQ15415 496 aaKnown RBP8.82□□□□□ -1
USF1-203ENST00000368021 TTC32Q5I0X7 151 aa8.82□□□□□ -1
USF1-203ENST00000368021 CDIP1Q9H305 208 aa8.82□□□□□ -1
USF1-203ENST00000368021 IGLL5B9A064 214 aa8.81□□□□□ -1
USF1-203ENST00000368021 GAGE2BQ13066 116 aa8.81□□□□□ -1
USF1-203ENST00000368021 WFDC2Q14508 124 aa8.81□□□□□ -1
USF1-203ENST00000368021 GAGE2EQ4V326 116 aa8.81□□□□□ -1
USF1-203ENST00000368021 SPANXN1Q5VSR9 72 aa8.81□□□□□ -1
USF1-203ENST00000368021 CEND1Q8N111 149 aa8.81□□□□□ -1
USF1-203ENST00000368021 Q8N1Y9 231 aa8.81□□□□□ -1
USF1-203ENST00000368021 PHLDA1Q8WV24 401 aaPredicted RBP8.81□□□□□ -1
USF1-203ENST00000368021 WFDC10AQ9H1F0 79 aa8.81□□□□□ -1
USF1-203ENST00000368021 GAGE2DQ9UEU5 116 aa8.81□□□□□ -1
USF1-203ENST00000368021 PHLDA3Q9Y5J5 127 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms