RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 CYSLTR1Q9Y271 337 aa8.64□□□□□ -1.03
USF1-201ENST00000368019 TRBV20-1A0A075B6N2 111 aa8.63□□□□□ -1.03
USF1-201ENST00000368019 C5orf56Q8N8D9 126 aa8.63□□□□□ -1.03
USF1-201ENST00000368019 TIMM17AQ99595 171 aa8.63□□□□□ -1.03
USF1-201ENST00000368019 VPREB3Q9UKI3 123 aa8.63□□□□□ -1.03
USF1-201ENST00000368019 TRAV26-2A0A0B4J265 109 aa8.62□□□□□ -1.03
USF1-201ENST00000368019 TRBV6-5A0A0K0K1A5 114 aa8.62□□□□□ -1.03
USF1-201ENST00000368019 C11orf86A6NJI1 115 aa8.62□□□□□ -1.03
USF1-201ENST00000368019 ETDBQ3ZM63 59 aa8.62□□□□□ -1.03
USF1-201ENST00000368019 MOB4Q9Y3A3 225 aa8.62□□□□□ -1.03
USF1-201ENST00000368019 PHLDA3Q9Y5J5 127 aa8.62□□□□□ -1.03
USF1-201ENST00000368019 PRSS29PA6NIE9 313 aa8.61□□□□□ -1.03
USF1-201ENST00000368019 ZNF815PA8K554 130 aa8.61□□□□□ -1.03
USF1-201ENST00000368019 NPFFO15130 113 aa8.61□□□□□ -1.03
USF1-201ENST00000368019 CD7P09564 240 aa8.61□□□□□ -1.03
USF1-201ENST00000368019 S100A4P26447 101 aaKnown RBP8.61□□□□□ -1.03
USF1-201ENST00000368019 FOXI1Q12951 378 aa8.61□□□□□ -1.03
USF1-201ENST00000368019 PRR9Q5T870 116 aa8.61□□□□□ -1.03
USF1-201ENST00000368019 USMG5Q96IX5 58 aa8.61□□□□□ -1.03
USF1-201ENST00000368019 LINC01600Q96MT4 127 aa8.61□□□□□ -1.03
USF1-201ENST00000368019 GTSF1LQ9H1H1 148 aa8.61□□□□□ -1.03
USF1-201ENST00000368019 PGPEP1Q9NXJ5 209 aa8.61□□□□□ -1.03
USF1-201ENST00000368019 TRAV41A0A0B4J266 112 aa8.6□□□□□ -1.03
USF1-201ENST00000368019 APOMO95445 188 aa8.6□□□□□ -1.03
USF1-201ENST00000368019 POLR2KP53803 58 aaKnown RBP8.6□□□□□ -1.03
USF1-201ENST00000368019 PMVKQ15126 192 aa8.6□□□□□ -1.03
USF1-201ENST00000368019 BEAN1Q3B7T3 259 aa8.6□□□□□ -1.03
USF1-201ENST00000368019 KPRPQ5T749 579 aaPredicted RBP8.6□□□□□ -1.03
USF1-201ENST00000368019 PPDPFLQ8WWR9 84 aa8.6□□□□□ -1.03
USF1-201ENST00000368019 ODF3Q96PU9 254 aa8.6□□□□□ -1.03
USF1-201ENST00000368019 MRPL16Q9NX20 251 aaKnown RBP8.6□□□□□ -1.03
USF1-201ENST00000368019 KIF25-AS1Q9Y6Z4 181 aa8.6□□□□□ -1.03
USF1-201ENST00000368019 IGLV4-69A0A075B6H9 119 aa8.59□□□□□ -1.03
USF1-201ENST00000368019 IGHV3-35A0A0C4DH35 117 aa8.59□□□□□ -1.03
USF1-201ENST00000368019 A0A0J9YY99 117 aa8.59□□□□□ -1.03
USF1-201ENST00000368019 IGIPA6NJ69 53 aa8.59□□□□□ -1.03
USF1-201ENST00000368019 SAA4P35542 130 aa8.59□□□□□ -1.03
USF1-201ENST00000368019 ARL3P36405 182 aa8.59□□□□□ -1.03
USF1-201ENST00000368019 SMAGPQ0VAQ4 97 aa8.59□□□□□ -1.03
USF1-201ENST00000368019 ANXA2RQ3ZCQ2 193 aa8.59□□□□□ -1.03
USF1-201ENST00000368019 TEN1Q86WV5 123 aa8.59□□□□□ -1.03
USF1-201ENST00000368019 GPHB5Q86YW7 130 aa8.59□□□□□ -1.03
USF1-201ENST00000368019 C20orf173Q96LM9 149 aa8.59□□□□□ -1.03
USF1-201ENST00000368019 ZNF580Q9UK33 172 aa8.59□□□□□ -1.03
USF1-201ENST00000368019 IGHV3OR16-8A0A075B7F1 116 aa8.58□□□□□ -1.04
USF1-201ENST00000368019 KLLNB2CW77 178 aa8.58□□□□□ -1.04
USF1-201ENST00000368019 VCYO14598 125 aa8.58□□□□□ -1.04
USF1-201ENST00000368019 TSPAN13O95857 204 aa8.58□□□□□ -1.04
USF1-201ENST00000368019 IGF1P05019 195 aa8.58□□□□□ -1.04
USF1-201ENST00000368019 CRYGDP07320 174 aa8.58□□□□□ -1.04
USF1-201ENST00000368019 RNASE3P12724 160 aaKnown RBP8.58□□□□□ -1.04
USF1-201ENST00000368019 LINC00315P59091 139 aa8.58□□□□□ -1.04
USF1-201ENST00000368019 SRSF9Q13242 221 aaKnown RBP eCLIP8.58□□□□□ -1.04
USF1-201ENST00000368019 RHOHQ15669 191 aa8.58□□□□□ -1.04
USF1-201ENST00000368019 SCGB1D4Q6XE38 83 aa8.58□□□□□ -1.04
USF1-201ENST00000368019 SH2D6Q7Z4S9 175 aa8.58□□□□□ -1.04
USF1-201ENST00000368019 NFE4Q86UQ8 179 aa8.58□□□□□ -1.04
USF1-201ENST00000368019 NDUFA11Q86Y39 141 aa8.58□□□□□ -1.04
USF1-201ENST00000368019 RPL39LQ96EH5 51 aaKnown RBP8.58□□□□□ -1.04
USF1-201ENST00000368019 IGHV3-66A0A0C4DH42 116 aa8.57□□□□□ -1.04
USF1-201ENST00000368019 TMEM262E9PQX1 116 aa8.57□□□□□ -1.04
USF1-201ENST00000368019 G3V318 75 aa8.57□□□□□ -1.04
USF1-201ENST00000368019 LGALS9O00182 355 aa8.57□□□□□ -1.04
USF1-201ENST00000368019 SMCPP49901 116 aaPredicted RBP8.57□□□□□ -1.04
USF1-201ENST00000368019 CRYBA4P53673 196 aa8.57□□□□□ -1.04
USF1-201ENST00000368019 AMTNQ6UX39 209 aa8.57□□□□□ -1.04
USF1-201ENST00000368019 ZFP2Q6ZN57 461 aa8.57□□□□□ -1.04
USF1-201ENST00000368019 C10orf126Q8N4M7 172 aa8.57□□□□□ -1.04
USF1-201ENST00000368019 C14orf178Q8N769 122 aaPredicted RBP8.57□□□□□ -1.04
USF1-201ENST00000368019 SLC25A29Q8N8R3 303 aa8.57□□□□□ -1.04
USF1-201ENST00000368019 KIR2DL4Q99706 377 aa8.57□□□□□ -1.04
USF1-201ENST00000368019 SELENOKQ9Y6D0 94 aa8.57□□□□□ -1.04
USF1-201ENST00000368019 AGRNO00468 2067 aa8.57□□□□□ -1.04
USF1-201ENST00000368019 COL7A1Q02388 2944 aa8.57□□□□□ -1.04
USF1-201ENST00000368019 A0A0J9YX75 114 aa8.56□□□□□ -1.04
USF1-201ENST00000368019 TRBV27A0A0K0K1C4 114 aa8.56□□□□□ -1.04
USF1-201ENST00000368019 H3BUX3 64 aa8.56□□□□□ -1.04
USF1-201ENST00000368019 K7EMT4 169 aa8.56□□□□□ -1.04
USF1-201ENST00000368019 IGHV3-30P01768 117 aa8.56□□□□□ -1.04
USF1-201ENST00000368019 MGPP08493 103 aa8.56□□□□□ -1.04
USF1-201ENST00000368019 IGHV3-30-5P0DP03 117 aa8.56□□□□□ -1.04
USF1-201ENST00000368019 NSUN5P1Q3KNT7 163 aa8.56□□□□□ -1.04
USF1-201ENST00000368019 ZNF876PQ49A33 203 aa8.56□□□□□ -1.04
USF1-201ENST00000368019 NBEAL2Q6ZNJ1 2754 aa8.56□□□□□ -1.04
USF1-201ENST00000368019 DNAH3Q8TD57 4116 aa8.56□□□□□ -1.04
USF1-201ENST00000368019 A0A0B4J2C4 111 aa8.55□□□□□ -1.04
USF1-201ENST00000368019 DUSP14O95147 198 aaKnown RBP8.55□□□□□ -1.04
USF1-201ENST00000368019 TSHBP01222 138 aa8.55□□□□□ -1.04
USF1-201ENST00000368019 P0DMU3 169 aa8.55□□□□□ -1.04
USF1-201ENST00000368019 FAM231AP0DMU4 169 aa8.55□□□□□ -1.04
USF1-201ENST00000368019 FAM231CP0DMU5 169 aa8.55□□□□□ -1.04
USF1-201ENST00000368019 HIST2H2BDQ6DRA6 164 aa8.55□□□□□ -1.04
USF1-201ENST00000368019 PLEKHB2Q96CS7 222 aa8.55□□□□□ -1.04
USF1-201ENST00000368019 KLK15Q9H2R5 256 aa8.55□□□□□ -1.04
USF1-201ENST00000368019 CDIP1Q9H305 208 aa8.55□□□□□ -1.04
USF1-201ENST00000368019 EDA2RQ9HAV5 297 aa8.55□□□□□ -1.04
USF1-201ENST00000368019 IGHV3OR16-13A0A075B7E8 117 aa8.54□□□□□ -1.04
USF1-201ENST00000368019 IGHV3-74A0A0B4J1X5 117 aa8.54□□□□□ -1.04
USF1-201ENST00000368019 A8MWV9 139 aa8.54□□□□□ -1.04
USF1-201ENST00000368019 ID1P41134 155 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms