RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 MAPKAPK5-AS1Q8N8E1 139 aa9.89□□□□□ -0.83
SF3B5-201ENST00000367569 PGLYRP4Q96LB8 373 aa9.89□□□□□ -0.83
SF3B5-201ENST00000367569 FOXA3P55318 350 aaPredicted RBP9.88□□□□□ -0.83
SF3B5-201ENST00000367569 LINC01556Q5JQF7 62 aa9.88□□□□□ -0.83
SF3B5-201ENST00000367569 TRBV7-3A0A075B6L6 115 aa9.87□□□□□ -0.83
SF3B5-201ENST00000367569 TRAV9-2A0A087WT02 112 aa9.87□□□□□ -0.83
SF3B5-201ENST00000367569 TRAV26-2A0A0B4J265 109 aa9.87□□□□□ -0.83
SF3B5-201ENST00000367569 TRBV10-1A0A0K0K1A3 114 aa9.87□□□□□ -0.83
SF3B5-201ENST00000367569 KRTAP10-2P60368 255 aa9.87□□□□□ -0.83
SF3B5-201ENST00000367569 FAM231DQ6ZW35 169 aa9.87□□□□□ -0.83
SF3B5-201ENST00000367569 DAZ4Q86SG3 579 aaKnown RBP9.87□□□□□ -0.83
SF3B5-201ENST00000367569 DAZ3Q9NR90 486 aaKnown RBP9.87□□□□□ -0.83
SF3B5-201ENST00000367569 F2Z2F3 143 aa9.86□□□□□ -0.83
SF3B5-201ENST00000367569 TRGC1P0CF51 173 aa9.86□□□□□ -0.83
SF3B5-201ENST00000367569 RPL23P62829 140 aaKnown RBP9.86□□□□□ -0.83
SF3B5-201ENST00000367569 OR10G8Q8NGN5 311 aa9.86□□□□□ -0.83
SF3B5-201ENST00000367569 DNAJC30Q96LL9 226 aa9.86□□□□□ -0.83
SF3B5-201ENST00000367569 DPH3P1Q9H4G8 78 aa9.86□□□□□ -0.83
SF3B5-201ENST00000367569 PEA15Q15121 130 aa9.85□□□□□ -0.83
SF3B5-201ENST00000367569 ISOC2Q96AB3 205 aa9.85□□□□□ -0.83
SF3B5-201ENST00000367569 A8MWL6 223 aa9.84□□□□□ -0.83
SF3B5-201ENST00000367569 M0QY20 66 aa9.84□□□□□ -0.83
SF3B5-201ENST00000367569 BTF3P20290 206 aaKnown RBP9.84□□□□□ -0.83
SF3B5-201ENST00000367569 TMEM241Q24JQ0 296 aa9.84□□□□□ -0.83
SF3B5-201ENST00000367569 C10orf126Q8N4M7 172 aa9.84□□□□□ -0.83
SF3B5-201ENST00000367569 V9GYV3 84 aa9.84□□□□□ -0.83
SF3B5-201ENST00000367569 A0A087WWC5 75 aa9.83□□□□□ -0.84
SF3B5-201ENST00000367569 HIGD1CA8MV81 97 aa9.83□□□□□ -0.84
SF3B5-201ENST00000367569 NIT1Q86X76 327 aa9.83□□□□□ -0.84
SF3B5-201ENST00000367569 Q8N1X5 172 aa9.83□□□□□ -0.84
SF3B5-201ENST00000367569 RPL39LQ96EH5 51 aaKnown RBP9.83□□□□□ -0.84
SF3B5-201ENST00000367569 CNFNQ9BYD5 112 aa9.83□□□□□ -0.84
SF3B5-201ENST00000367569 NAT8Q9UHE5 227 aa9.83□□□□□ -0.84
SF3B5-201ENST00000367569 IBA57-AS1B1ANH7 110 aa9.82□□□□□ -0.84
SF3B5-201ENST00000367569 PSCAO43653 123 aa9.82□□□□□ -0.84
SF3B5-201ENST00000367569 NDUFS6O75380 124 aaKnown RBP9.82□□□□□ -0.84
SF3B5-201ENST00000367569 CT83Q5H943 113 aa9.82□□□□□ -0.84
SF3B5-201ENST00000367569 RASL11AQ6T310 242 aa9.82□□□□□ -0.84
SF3B5-201ENST00000367569 NTM-AS1Q6ZSK4 140 aa9.82□□□□□ -0.84
SF3B5-201ENST00000367569 C15orf54Q8N8G6 183 aa9.82□□□□□ -0.84
SF3B5-201ENST00000367569 TSKUQ8WUA8 353 aa9.82□□□□□ -0.84
SF3B5-201ENST00000367569 OSTCQ9NRP0 149 aa9.82□□□□□ -0.84
SF3B5-201ENST00000367569 URGCP-MRPS24S4R325 110 aa9.82□□□□□ -0.84
SF3B5-201ENST00000367569 TRBV6-8A0A0A6YYG3 113 aa9.81□□□□□ -0.84
SF3B5-201ENST00000367569 RAB14P61106 215 aa9.81□□□□□ -0.84
SF3B5-201ENST00000367569 IFITM2Q01629 132 aa9.81□□□□□ -0.84
SF3B5-201ENST00000367569 FAM74A3Q4VXF1 159 aa9.81□□□□□ -0.84
SF3B5-201ENST00000367569 MPV17L2Q567V2 206 aa9.81□□□□□ -0.84
SF3B5-201ENST00000367569 NFE4Q86UQ8 179 aa9.81□□□□□ -0.84
SF3B5-201ENST00000367569 GATD1Q8NB37 220 aa9.81□□□□□ -0.84
SF3B5-201ENST00000367569 CHCHD5Q9BSY4 110 aa9.81□□□□□ -0.84
SF3B5-201ENST00000367569 KLK12Q9UKR0 248 aa9.81□□□□□ -0.84
SF3B5-201ENST00000367569 TMEM262E9PQX1 116 aa9.8□□□□□ -0.84
SF3B5-201ENST00000367569 H7C1H1 209 aa9.8□□□□□ -0.84
SF3B5-201ENST00000367569 GAS8-AS1O95177 125 aa9.8□□□□□ -0.84
SF3B5-201ENST00000367569 GAGE6Q13070 117 aa9.8□□□□□ -0.84
SF3B5-201ENST00000367569 CLPSL2Q6UWE3 100 aa9.8□□□□□ -0.84
SF3B5-201ENST00000367569 BORCS7Q96B45 105 aa9.8□□□□□ -0.84
SF3B5-201ENST00000367569 FAT1Q14517 4588 aa9.79□□□□□ -0.84
SF3B5-201ENST00000367569 A0A087WTM6 91 aa9.79□□□□□ -0.84
SF3B5-201ENST00000367569 A0A087WX48 190 aa9.79□□□□□ -0.84
SF3B5-201ENST00000367569 LECT2O14960 151 aa9.79□□□□□ -0.84
SF3B5-201ENST00000367569 WDR73Q6P4I2 378 aa9.79□□□□□ -0.84
SF3B5-201ENST00000367569 SMIM15Q7Z3B0 74 aa9.79□□□□□ -0.84
SF3B5-201ENST00000367569 Q8N976 141 aa9.79□□□□□ -0.84
SF3B5-201ENST00000367569 A0A1B0GUT8 65 aa9.78□□□□□ -0.84
SF3B5-201ENST00000367569 K7EP13 123 aa9.78□□□□□ -0.84
SF3B5-201ENST00000367569 NCR2O95944 276 aa9.78□□□□□ -0.84
SF3B5-201ENST00000367569 WFDC2Q14508 124 aa9.78□□□□□ -0.84
SF3B5-201ENST00000367569 NUP35Q8NFH5 326 aa9.78□□□□□ -0.84
SF3B5-201ENST00000367569 UBE2WQ96B02 151 aa9.78□□□□□ -0.84
SF3B5-201ENST00000367569 SMKR1H3BMG3 65 aa9.77□□□□□ -0.85
SF3B5-201ENST00000367569 LAGE3Q14657 143 aa9.77□□□□□ -0.85
SF3B5-201ENST00000367569 KCNIP4Q6PIL6 250 aa9.77□□□□□ -0.85
SF3B5-201ENST00000367569 AMN1Q8IY45 258 aa9.77□□□□□ -0.85
SF3B5-201ENST00000367569 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.77□□□□□ -0.85
SF3B5-201ENST00000367569 GFRA4Q9GZZ7 299 aa9.77□□□□□ -0.85
SF3B5-201ENST00000367569 NIT2Q9NQR4 276 aa9.77□□□□□ -0.85
SF3B5-201ENST00000367569 TRBV25-1A0A075B6N4 114 aa9.76□□□□□ -0.85
SF3B5-201ENST00000367569 IGKV2D-24A0A075B6R9 120 aa9.76□□□□□ -0.85
SF3B5-201ENST00000367569 CLLU1Q5K131 121 aa9.76□□□□□ -0.85
SF3B5-201ENST00000367569 IGHV1-24A0A0C4DH33 117 aa9.75□□□□□ -0.85
SF3B5-201ENST00000367569 EREGO14944 169 aa9.75□□□□□ -0.85
SF3B5-201ENST00000367569 ANGP03950 147 aaKnown RBP9.75□□□□□ -0.85
SF3B5-201ENST00000367569 MRPL54Q6P161 138 aaKnown RBP9.75□□□□□ -0.85
SF3B5-201ENST00000367569 ATRAIDQ6UW56 229 aa9.75□□□□□ -0.85
SF3B5-201ENST00000367569 RNF185Q96GF1 192 aa9.75□□□□□ -0.85
SF3B5-201ENST00000367569 SMDT1Q9H4I9 107 aa9.75□□□□□ -0.85
SF3B5-201ENST00000367569 NAT8BQ9UHF3 227 aa9.75□□□□□ -0.85
SF3B5-201ENST00000367569 HERC1Q15751 4861 aa9.75□□□□□ -0.85
SF3B5-201ENST00000367569 LRCOL1A6NCL2 159 aa9.74□□□□□ -0.85
SF3B5-201ENST00000367569 RPS10P46783 165 aaKnown RBP9.74□□□□□ -0.85
SF3B5-201ENST00000367569 AMTP48728 403 aa9.74□□□□□ -0.85
SF3B5-201ENST00000367569 CAMPP49913 170 aa9.74□□□□□ -0.85
SF3B5-201ENST00000367569 TRAV8-3A0A0A6YYJ7 113 aa9.73□□□□□ -0.85
SF3B5-201ENST00000367569 SMIM27A0A1W2PRY6 76 aa9.73□□□□□ -0.85
SF3B5-201ENST00000367569 CRPP02741 224 aa9.73□□□□□ -0.85
SF3B5-201ENST00000367569 RBX1P62877 108 aa9.73□□□□□ -0.85
SF3B5-201ENST00000367569 RIGQ13278 110 aa9.73□□□□□ -0.85
SF3B5-201ENST00000367569 COTL1Q14019 142 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms