RNA–Protein interactions for RNA: ENST00000366746.7

MRPL55-217, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-217ENST00000366746 CLPSL2Q6UWE3 100 aa10.71□□□□□ -0.69
MRPL55-217ENST00000366746 NTM-AS1Q6ZSK4 140 aa10.71□□□□□ -0.69
MRPL55-217ENST00000366746 OR10AG1Q8NH19 301 aa10.71□□□□□ -0.69
MRPL55-217ENST00000366746 MAP1LC3B2A6NCE7 125 aa10.7□□□□□ -0.7
MRPL55-217ENST00000366746 AKR1C3P42330 323 aa10.7□□□□□ -0.7
MRPL55-217ENST00000366746 FHITP49789 147 aa10.7□□□□□ -0.7
MRPL55-217ENST00000366746 GAGE6Q13070 117 aa10.7□□□□□ -0.7
MRPL55-217ENST00000366746 SPANXN1Q5VSR9 72 aa10.7□□□□□ -0.7
MRPL55-217ENST00000366746 STOML3Q8TAV4 291 aa10.7□□□□□ -0.7
MRPL55-217ENST00000366746 DERL1Q9BUN8 251 aa10.7□□□□□ -0.7
MRPL55-217ENST00000366746 MAP1LC3BQ9GZQ8 125 aa10.7□□□□□ -0.7
MRPL55-217ENST00000366746 TRBV25-1A0A075B6N4 114 aa10.69□□□□□ -0.7
MRPL55-217ENST00000366746 FXYD6-FXYD2A0A087WZ82 144 aa10.69□□□□□ -0.7
MRPL55-217ENST00000366746 KRTAP26-1Q6PEX3 210 aa10.69□□□□□ -0.7
MRPL55-217ENST00000366746 VAX2Q9UIW0 290 aa10.69□□□□□ -0.7
MRPL55-217ENST00000366746 MUC21A0A0G2JKD1 596 aa10.68□□□□□ -0.7
MRPL55-217ENST00000366746 MUC21A0A140T8X8 626 aa10.68□□□□□ -0.7
MRPL55-217ENST00000366746 CXCL1P09341 107 aa10.68□□□□□ -0.7
MRPL55-217ENST00000366746 SMIM17P0DL12 118 aa10.68□□□□□ -0.7
MRPL55-217ENST00000366746 SSTP61278 116 aa10.68□□□□□ -0.7
MRPL55-217ENST00000366746 hDV102S1A0JD36 115 aa10.67□□□□□ -0.7
MRPL55-217ENST00000366746 S100A9P06702 114 aaKnown RBP10.67□□□□□ -0.7
MRPL55-217ENST00000366746 GIPP09681 153 aaPredicted RBP10.67□□□□□ -0.7
MRPL55-217ENST00000366746 CNBPP62633 177 aaKnown RBP10.67□□□□□ -0.7
MRPL55-217ENST00000366746 SSBP4Q9BWG4 385 aaPredicted RBP10.67□□□□□ -0.7
MRPL55-217ENST00000366746 IGLV10-54A0A075B6I4 117 aa10.66□□□□□ -0.7
MRPL55-217ENST00000366746 IGHV3-64A0A075B6Q5 118 aa10.66□□□□□ -0.7
MRPL55-217ENST00000366746 SNAI2O43623 268 aa10.66□□□□□ -0.7
MRPL55-217ENST00000366746 OR5AL1P0C617 328 aa10.66□□□□□ -0.7
MRPL55-217ENST00000366746 REG3AQ06141 175 aa10.66□□□□□ -0.7
MRPL55-217ENST00000366746 CIRBPQ14011 172 aaKnown RBP10.66□□□□□ -0.7
MRPL55-217ENST00000366746 AP5S1Q9NUS5 200 aa10.66□□□□□ -0.7
MRPL55-217ENST00000366746 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.65□□□□□ -0.7
MRPL55-217ENST00000366746 TRAV8-4A0A0B4J246 113 aa10.65□□□□□ -0.7
MRPL55-217ENST00000366746 IGHV1-24A0A0C4DH33 117 aa10.65□□□□□ -0.7
MRPL55-217ENST00000366746 PAGE4O60829 102 aa10.65□□□□□ -0.7
MRPL55-217ENST00000366746 P01737 135 aa10.65□□□□□ -0.7
MRPL55-217ENST00000366746 IQCJQ1A5X6 159 aa10.65□□□□□ -0.7
MRPL55-217ENST00000366746 BAGE2Q86Y30 109 aa10.65□□□□□ -0.7
MRPL55-217ENST00000366746 RNF185Q96GF1 192 aa10.65□□□□□ -0.7
MRPL55-217ENST00000366746 DPH3P1Q9H4G8 78 aa10.65□□□□□ -0.7
MRPL55-217ENST00000366746 AP1S3Q96PC3 154 aa10.64□□□□□ -0.71
MRPL55-217ENST00000366746 A0A087WYN8 130 aa10.63□□□□□ -0.71
MRPL55-217ENST00000366746 KIF25-AS1Q9Y6Z4 181 aa10.63□□□□□ -0.71
MRPL55-217ENST00000366746 RAB5CP51148 216 aa10.62□□□□□ -0.71
MRPL55-217ENST00000366746 MLST8Q9BVC4 326 aa10.62□□□□□ -0.71
MRPL55-217ENST00000366746 PKHD1L1Q86WI1 4243 aa10.62□□□□□ -0.71
MRPL55-217ENST00000366746 H7C1H1 209 aa10.61□□□□□ -0.71
MRPL55-217ENST00000366746 PFDN1O60925 122 aa10.61□□□□□ -0.71
MRPL55-217ENST00000366746 CHTF8P0CG12 524 aa10.61□□□□□ -0.71
MRPL55-217ENST00000366746 GZMBP10144 247 aa10.61□□□□□ -0.71
MRPL55-217ENST00000366746 C20orf203Q8NBC4 194 aa10.61□□□□□ -0.71
MRPL55-217ENST00000366746 SPACA4Q8TDM5 124 aa10.61□□□□□ -0.71
MRPL55-217ENST00000366746 SFT2D1Q8WV19 159 aa10.61□□□□□ -0.71
MRPL55-217ENST00000366746 A0A1B0GUV1 79 aa10.6□□□□□ -0.71
MRPL55-217ENST00000366746 SCO2A0A1W2PP80 73 aa10.6□□□□□ -0.71
MRPL55-217ENST00000366746 M0QY20 66 aa10.6□□□□□ -0.71
MRPL55-217ENST00000366746 SLPIP03973 132 aa10.6□□□□□ -0.71
MRPL55-217ENST00000366746 MGPP08493 103 aa10.6□□□□□ -0.71
MRPL55-217ENST00000366746 C7orf33Q8WU49 177 aa10.6□□□□□ -0.71
MRPL55-217ENST00000366746 TMEM243Q9BU79 118 aa10.6□□□□□ -0.71
MRPL55-217ENST00000366746 TMUB2Q71RG4 321 aa10.59□□□□□ -0.71
MRPL55-217ENST00000366746 CYTL1Q9NRR1 136 aa10.59□□□□□ -0.71
MRPL55-217ENST00000366746 IGLV4-60A0A075B6I1 120 aa10.58□□□□□ -0.72
MRPL55-217ENST00000366746 A0A1B0GV50 99 aa10.58□□□□□ -0.72
MRPL55-217ENST00000366746 PHOX2AO14813 284 aa10.58□□□□□ -0.72
MRPL55-217ENST00000366746 ARPC5O15511 151 aa10.58□□□□□ -0.72
MRPL55-217ENST00000366746 NKX2-5P52952 324 aaPredicted RBP10.58□□□□□ -0.72
MRPL55-217ENST00000366746 WDR73Q6P4I2 378 aa10.58□□□□□ -0.72
MRPL55-217ENST00000366746 TPPP3Q9BW30 176 aa10.58□□□□□ -0.72
MRPL55-217ENST00000366746 PLAC8Q9NZF1 115 aa10.58□□□□□ -0.72
MRPL55-217ENST00000366746 SULT1A2P50226 295 aa10.57□□□□□ -0.72
MRPL55-217ENST00000366746 SUMO4Q6EEV6 95 aa10.57□□□□□ -0.72
MRPL55-217ENST00000366746 CFAP161Q6P656 301 aa10.57□□□□□ -0.72
MRPL55-217ENST00000366746 FAM213BQ8TBF2 198 aa10.57□□□□□ -0.72
MRPL55-217ENST00000366746 MBD3L1Q8WWY6 194 aa10.57□□□□□ -0.72
MRPL55-217ENST00000366746 UBE2L6O14933 153 aa10.56□□□□□ -0.72
MRPL55-217ENST00000366746 GTSF1Q8WW33 167 aa10.56□□□□□ -0.72
MRPL55-217ENST00000366746 GFRA4Q9GZZ7 299 aa10.56□□□□□ -0.72
MRPL55-217ENST00000366746 UMAD1C9J7I0 102 aa10.55□□□□□ -0.72
MRPL55-217ENST00000366746 COX6A2Q02221 97 aa10.55□□□□□ -0.72
MRPL55-217ENST00000366746 RASL11AQ6T310 242 aa10.55□□□□□ -0.72
MRPL55-217ENST00000366746 FER1L6-AS1Q8NA97 138 aa10.55□□□□□ -0.72
MRPL55-217ENST00000366746 RPL35P42766 123 aaKnown RBP10.54□□□□□ -0.72
MRPL55-217ENST00000366746 RPS10P46783 165 aaKnown RBP10.54□□□□□ -0.72
MRPL55-217ENST00000366746 RPS20P60866 119 aaKnown RBP10.54□□□□□ -0.72
MRPL55-217ENST00000366746 CACNG7P62955 275 aa10.54□□□□□ -0.72
MRPL55-217ENST00000366746 MAJINQ3KP22 176 aa10.54□□□□□ -0.72
MRPL55-217ENST00000366746 KCNRGQ8N5I3 272 aa10.54□□□□□ -0.72
MRPL55-217ENST00000366746 PGLYRP4Q96LB8 373 aa10.54□□□□□ -0.72
MRPL55-217ENST00000366746 LINC01600Q96MT4 127 aa10.54□□□□□ -0.72
MRPL55-217ENST00000366746 GAGE12HA6NDE8 117 aa10.53□□□□□ -0.72
MRPL55-217ENST00000366746 G3V3Q6 166 aa10.53□□□□□ -0.72
MRPL55-217ENST00000366746 AMTP48728 403 aa10.53□□□□□ -0.72
MRPL55-217ENST00000366746 OR2D3Q8NGH3 330 aa10.53□□□□□ -0.72
MRPL55-217ENST00000366746 NIT2Q9NQR4 276 aa10.53□□□□□ -0.72
MRPL55-217ENST00000366746 RNF213Q63HN8 5207 aa10.52□□□□□ -0.72
MRPL55-217ENST00000366746 NDUFS6O75380 124 aaKnown RBP10.52□□□□□ -0.73
MRPL55-217ENST00000366746 IGLC6P0CF74 106 aa10.52□□□□□ -0.73
MRPL55-217ENST00000366746 COTL1Q14019 142 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms