RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 C20orf173Q96LM9 149 aa14.81□□□□□ -0.04
TRIM58-201ENST00000366481 PSMG3-AS1Q96PY0 264 aa14.81□□□□□ -0.04
TRIM58-201ENST00000366481 TRAV21A0A0B4J279 112 aa14.81□□□□□ -0.04
TRIM58-201ENST00000366481 NPFFO15130 113 aa14.81□□□□□ -0.04
TRIM58-201ENST00000366481 NHLRC4P0CG21 123 aaPredicted RBP14.81□□□□□ -0.04
TRIM58-201ENST00000366481 LMO4P61968 165 aa14.81□□□□□ -0.04
TRIM58-201ENST00000366481 SLC25A29Q8N8R3 303 aa14.81□□□□□ -0.04
TRIM58-201ENST00000366481 ADARB2-AS1A8MUL3 147 aa14.8□□□□□ -0.04
TRIM58-201ENST00000366481 CRYGDP07320 174 aa14.8□□□□□ -0.04
TRIM58-201ENST00000366481 EEF1AKMT3Q96AZ1 226 aa14.8□□□□□ -0.04
TRIM58-201ENST00000366481 OPRPNQ99935 248 aaPredicted RBP14.8□□□□□ -0.04
TRIM58-201ENST00000366481 JPT2Q9H910 190 aa14.79□□□□□ -0.04
TRIM58-201ENST00000366481 NPC2P61916 151 aa14.79□□□□□ -0.04
TRIM58-201ENST00000366481 MUSTN1Q8IVN3 82 aa14.79□□□□□ -0.04
TRIM58-201ENST00000366481 EDN2P20800 178 aa14.78□□□□□ -0.04
TRIM58-201ENST00000366481 ATXN8Q156A1 80 aa14.78□□□□□ -0.04
TRIM58-201ENST00000366481 CITED1Q99966 193 aa14.78□□□□□ -0.04
TRIM58-201ENST00000366481 IGLV4-69A0A075B6H9 119 aa14.77□□□□□ -0.04
TRIM58-201ENST00000366481 C2orf82Q6UX34 121 aa14.77□□□□□ -0.04
TRIM58-201ENST00000366481 C9orf47Q6ZRZ4 202 aa14.77□□□□□ -0.04
TRIM58-201ENST00000366481 IGHV4-4A0A075B6R2 117 aa14.77□□□□□ -0.04
TRIM58-201ENST00000366481 OOSP1A8MZH6 123 aa14.77□□□□□ -0.04
TRIM58-201ENST00000366481 CFAP161Q6P656 301 aa14.77□□□□□ -0.04
TRIM58-201ENST00000366481 C5orf56Q8N8D9 126 aa14.77□□□□□ -0.04
TRIM58-201ENST00000366481 ZNF56Q15929 161 aa14.77□□□□□ -0.05
TRIM58-201ENST00000366481 LINC01620Q4KN68 170 aa14.77□□□□□ -0.05
TRIM58-201ENST00000366481 MEIG1Q5JSS6 88 aa14.77□□□□□ -0.05
TRIM58-201ENST00000366481 TRAV41A0A0B4J266 112 aa14.76□□□□□ -0.05
TRIM58-201ENST00000366481 PPP1R17O96001 155 aa14.76□□□□□ -0.05
TRIM58-201ENST00000366481 RPL32P62910 135 aaKnown RBP14.76□□□□□ -0.05
TRIM58-201ENST00000366481 MAPK1IP1LQ8NDC0 245 aa14.76□□□□□ -0.05
TRIM58-201ENST00000366481 IGHV3-33P01772 117 aa14.76□□□□□ -0.05
TRIM58-201ENST00000366481 ZNRF2Q8NHG8 242 aa14.76□□□□□ -0.05
TRIM58-201ENST00000366481 TSHBP01222 138 aa14.75□□□□□ -0.05
TRIM58-201ENST00000366481 ELANEP08246 267 aa14.75□□□□□ -0.05
TRIM58-201ENST00000366481 IGHV4-38-2P0DP08 117 aa14.75□□□□□ -0.05
TRIM58-201ENST00000366481 BLCAPP62952 87 aa14.75□□□□□ -0.05
TRIM58-201ENST00000366481 SDHAF1A6NFY7 115 aa14.75□□□□□ -0.05
TRIM58-201ENST00000366481 H3BMM0 161 aa14.75□□□□□ -0.05
TRIM58-201ENST00000366481 UBE2WQ96B02 151 aa14.75□□□□□ -0.05
TRIM58-201ENST00000366481 SBSPONQ8IVN8 264 aa14.74□□□□□ -0.05
TRIM58-201ENST00000366481 PF4V1P10720 104 aa14.74□□□□□ -0.05
TRIM58-201ENST00000366481 VCYO14598 125 aa14.73□□□□□ -0.05
TRIM58-201ENST00000366481 TMEM95Q3KNT9 176 aa14.73□□□□□ -0.05
TRIM58-201ENST00000366481 IGHV4-61A0A0C4DH41 118 aa14.72□□□□□ -0.05
TRIM58-201ENST00000366481 LINC00477Q96M19 166 aa14.72□□□□□ -0.05
TRIM58-201ENST00000366481 SPXQ9BT56 116 aa14.72□□□□□ -0.05
TRIM58-201ENST00000366481 IGKV3-20P01619 116 aa14.71□□□□□ -0.05
TRIM58-201ENST00000366481 DUX3Q96PT4 197 aa14.71□□□□□ -0.05
TRIM58-201ENST00000366481 GPHB5Q86YW7 130 aa14.71□□□□□ -0.06
TRIM58-201ENST00000366481 ZFAND2AQ8N6M9 145 aa14.71□□□□□ -0.06
TRIM58-201ENST00000366481 IGIPA6NJ69 53 aa14.7□□□□□ -0.06
TRIM58-201ENST00000366481 C9orf139Q6ZV77 190 aa14.7□□□□□ -0.06
TRIM58-201ENST00000366481 CHCHD5Q9BSY4 110 aa14.7□□□□□ -0.06
TRIM58-201ENST00000366481 TRBV7-1A0A0A6YYK4 115 aa14.7□□□□□ -0.06
TRIM58-201ENST00000366481 H3BUX3 64 aa14.7□□□□□ -0.06
TRIM58-201ENST00000366481 SUMO4Q6EEV6 95 aa14.7□□□□□ -0.06
TRIM58-201ENST00000366481 TMEM141Q96I45 108 aa14.7□□□□□ -0.06
TRIM58-201ENST00000366481 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.7□□□□□ -0.06
TRIM58-201ENST00000366481 COX6CP09669 75 aa14.7□□□□□ -0.06
TRIM58-201ENST00000366481 IGHV1-69DA0A0B4J2H0 117 aa14.69□□□□□ -0.06
TRIM58-201ENST00000366481 TMEM263Q8WUH6 116 aaKnown RBP14.69□□□□□ -0.06
TRIM58-201ENST00000366481 ITLN2Q8WWU7 325 aaPredicted RBP14.68□□□□□ -0.06
TRIM58-201ENST00000366481 ZNF580Q9UK33 172 aa14.68□□□□□ -0.06
TRIM58-201ENST00000366481 MOB4Q9Y3A3 225 aa14.68□□□□□ -0.06
TRIM58-201ENST00000366481 A0A0J9YXV3 536 aa14.68□□□□□ -0.06
TRIM58-201ENST00000366481 RNF223E7ERA6 249 aa14.68□□□□□ -0.06
TRIM58-201ENST00000366481 TRIAP1O43715 76 aa14.68□□□□□ -0.06
TRIM58-201ENST00000366481 MRPL53Q96EL3 112 aaKnown RBP14.68□□□□□ -0.06
TRIM58-201ENST00000366481 ODF3Q96PU9 254 aa14.67□□□□□ -0.06
TRIM58-201ENST00000366481 TRBV10-2A0A0K0K1G8 114 aa14.66□□□□□ -0.06
TRIM58-201ENST00000366481 RNASE3P12724 160 aaKnown RBP14.66□□□□□ -0.06
TRIM58-201ENST00000366481 C10orf99Q6UWK7 81 aa14.66□□□□□ -0.06
TRIM58-201ENST00000366481 CLEC2BQ92478 149 aa14.66□□□□□ -0.06
TRIM58-201ENST00000366481 FASNP49327 2511 aaKnown RBP14.66□□□□□ -0.06
TRIM58-201ENST00000366481 TRAV12-3A0A0B4J271 114 aa14.66□□□□□ -0.06
TRIM58-201ENST00000366481 M0R2P5 195 aa14.66□□□□□ -0.06
TRIM58-201ENST00000366481 ZNF876PQ49A33 203 aa14.66□□□□□ -0.06
TRIM58-201ENST00000366481 CHD6Q8TD26 2715 aa14.66□□□□□ -0.06
TRIM58-201ENST00000366481 TEX15Q9BXT5 2789 aa14.66□□□□□ -0.06
TRIM58-201ENST00000366481 OVOL1O14753 267 aa14.66□□□□□ -0.06
TRIM58-201ENST00000366481 TRAV8-3A0A0A6YYJ7 113 aa14.65□□□□□ -0.06
TRIM58-201ENST00000366481 IGHV1-69P01742 117 aa14.65□□□□□ -0.06
TRIM58-201ENST00000366481 PRRC2AP48634 2157 aaKnown RBP14.64□□□□□ -0.07
TRIM58-201ENST00000366481 LEPROTO15243 131 aa14.64□□□□□ -0.07
TRIM58-201ENST00000366481 EIF4EBP3O60516 100 aaPredicted RBP14.64□□□□□ -0.07
TRIM58-201ENST00000366481 RPL13AP40429 203 aaKnown RBP14.64□□□□□ -0.07
TRIM58-201ENST00000366481 Q6ZSV7 163 aa14.64□□□□□ -0.07
TRIM58-201ENST00000366481 TIMM17AQ99595 171 aa14.64□□□□□ -0.07
TRIM58-201ENST00000366481 ATP5J2P56134 94 aa14.64□□□□□ -0.07
TRIM58-201ENST00000366481 RNASE13Q5GAN3 156 aaKnown RBP14.64□□□□□ -0.07
TRIM58-201ENST00000366481 C2CD3Q4AC94 2353 aa14.64□□□□□ -0.07
TRIM58-201ENST00000366481 HTN1P15515 57 aa14.64□□□□□ -0.07
TRIM58-201ENST00000366481 RHPN1-AS1Q9BWJ2 59 aa14.64□□□□□ -0.07
TRIM58-201ENST00000366481 U3KQE9 123 aa14.64□□□□□ -0.07
TRIM58-201ENST00000366481 LENEPQ9Y5L5 61 aa14.63□□□□□ -0.07
TRIM58-201ENST00000366481 MXRA5Q9NR99 2828 aa14.63□□□□□ -0.07
TRIM58-201ENST00000366481 A0A0B4J2C4 111 aa14.63□□□□□ -0.07
TRIM58-201ENST00000366481 LGALS9O00182 355 aa14.63□□□□□ -0.07
TRIM58-201ENST00000366481 FAM110AQ9BQ89 295 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms