RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 IL20Q9NYY1 176 aa-2.71□□□□□ -2.84
RNU6-238P-201ENST00000363313 TRPC5OSA6NMA1 111 aa-2.72□□□□□ -2.84
RNU6-238P-201ENST00000363313 SYS1-DBNDD2H3BUS1 97 aa-2.72□□□□□ -2.84
RNU6-238P-201ENST00000363313 K7EP34 96 aa-2.72□□□□□ -2.84
RNU6-238P-201ENST00000363313 CALB1P05937 261 aa-2.72□□□□□ -2.84
RNU6-238P-201ENST00000363313 COX8AP10176 69 aa-2.72□□□□□ -2.84
RNU6-238P-201ENST00000363313 SLC25A6P12236 298 aa-2.72□□□□□ -2.84
RNU6-238P-201ENST00000363313 BLCAPP62952 87 aa-2.72□□□□□ -2.84
RNU6-238P-201ENST00000363313 LAMTOR3Q9UHA4 124 aa-2.72□□□□□ -2.84
RNU6-238P-201ENST00000363313 NDUFAF1Q9Y375 327 aa-2.72□□□□□ -2.84
RNU6-238P-201ENST00000363313 PRELID3BQ9Y3B1 194 aa-2.72□□□□□ -2.84
RNU6-238P-201ENST00000363313 MRC1P22897 1456 aa-2.72□□□□□ -2.85
RNU6-238P-201ENST00000363313 TCOF1Q13428 1488 aaKnown RBP-2.72□□□□□ -2.85
RNU6-238P-201ENST00000363313 CPSF4LA6NMK7 179 aaKnown RBP-2.73□□□□□ -2.85
RNU6-238P-201ENST00000363313 PITX3O75364 302 aa-2.73□□□□□ -2.85
RNU6-238P-201ENST00000363313 S100A9P06702 114 aaKnown RBP-2.73□□□□□ -2.85
RNU6-238P-201ENST00000363313 OGNP20774 298 aaKnown RBP-2.73□□□□□ -2.85
RNU6-238P-201ENST00000363313 SPCS2Q15005 226 aa-2.73□□□□□ -2.85
RNU6-238P-201ENST00000363313 KRTAP19-5Q3LI72 72 aa-2.73□□□□□ -2.85
RNU6-238P-201ENST00000363313 OTOSQ8NHW6 89 aa-2.73□□□□□ -2.85
RNU6-238P-201ENST00000363313 NEK7Q8TDX7 302 aa-2.73□□□□□ -2.85
RNU6-238P-201ENST00000363313 PTH2Q96A98 100 aa-2.73□□□□□ -2.85
RNU6-238P-201ENST00000363313 NAA60Q9H7X0 242 aa-2.73□□□□□ -2.85
RNU6-238P-201ENST00000363313 ADGBQ8N7X0 1667 aa-2.73□□□□□ -2.85
RNU6-238P-201ENST00000363313 HMGXB3Q12766 1538 aa-2.73□□□□□ -2.85
RNU6-238P-201ENST00000363313 ANKRD50Q9ULJ7 1429 aa-2.74□□□□□ -2.85
RNU6-238P-201ENST00000363313 ZNF236Q9UL36 1845 aa-2.74□□□□□ -2.85
RNU6-238P-201ENST00000363313 TRAV12-3A0A0B4J271 114 aa-2.74□□□□□ -2.85
RNU6-238P-201ENST00000363313 FAM92AA1XBS5 289 aa-2.74□□□□□ -2.85
RNU6-238P-201ENST00000363313 CLPSL1A2RUU4 121 aa-2.74□□□□□ -2.85
RNU6-238P-201ENST00000363313 SMIM6P0DI80 62 aa-2.74□□□□□ -2.85
RNU6-238P-201ENST00000363313 CKS2P33552 79 aa-2.74□□□□□ -2.85
RNU6-238P-201ENST00000363313 SKP1P63208 163 aa-2.74□□□□□ -2.85
RNU6-238P-201ENST00000363313 ERG28Q9UKR5 140 aa-2.74□□□□□ -2.85
RNU6-238P-201ENST00000363313 UHRF1BP1Q6BDS2 1440 aa-2.75□□□□□ -2.85
RNU6-238P-201ENST00000363313 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-2.75□□□□□ -2.85
RNU6-238P-201ENST00000363313 TRAV2A0A0B4J234 112 aa-2.75□□□□□ -2.85
RNU6-238P-201ENST00000363313 HMGB3O15347 200 aaKnown RBP-2.75□□□□□ -2.85
RNU6-238P-201ENST00000363313 YKT6O15498 198 aa-2.75□□□□□ -2.85
RNU6-238P-201ENST00000363313 Q6JHZ5 121 aa-2.75□□□□□ -2.85
RNU6-238P-201ENST00000363313 SLC25A26Q70HW3 274 aa-2.75□□□□□ -2.85
RNU6-238P-201ENST00000363313 OR51A4Q8NGJ6 313 aa-2.75□□□□□ -2.85
RNU6-238P-201ENST00000363313 AMELXQ99217 191 aa-2.75□□□□□ -2.85
RNU6-238P-201ENST00000363313 PYCARDQ9ULZ3 195 aa-2.75□□□□□ -2.85
RNU6-238P-201ENST00000363313 TRAPPC8Q9Y2L5 1435 aa-2.76□□□□□ -2.85
RNU6-238P-201ENST00000363313 CENPEQ02224 2701 aa-2.76□□□□□ -2.85
RNU6-238P-201ENST00000363313 TULP4Q9NRJ4 1543 aa-2.76□□□□□ -2.85
RNU6-238P-201ENST00000363313 SBF2Q86WG5 1849 aa-2.76□□□□□ -2.85
RNU6-238P-201ENST00000363313 TRAV16A0A0A6YYK6 109 aaPredicted RBP-2.76□□□□□ -2.85
RNU6-238P-201ENST00000363313 IQCF5A8MTL0 148 aa-2.76□□□□□ -2.85
RNU6-238P-201ENST00000363313 IFNA16P05015 189 aa-2.76□□□□□ -2.85
RNU6-238P-201ENST00000363313 RPL19P84098 196 aaKnown RBP-2.76□□□□□ -2.85
RNU6-238P-201ENST00000363313 STX19Q8N4C7 294 aa-2.76□□□□□ -2.85
RNU6-238P-201ENST00000363313 TAS2R8Q9NYW2 309 aa-2.76□□□□□ -2.85
RNU6-238P-201ENST00000363313 CEP290O15078 2479 aa-2.76□□□□□ -2.85
RNU6-238P-201ENST00000363313 MUC22E2RYF6 1773 aaPredicted RBP-2.77□□□□□ -2.85
RNU6-238P-201ENST00000363313 MAP1LC3B2A6NCE7 125 aa-2.77□□□□□ -2.85
RNU6-238P-201ENST00000363313 DEXIO95424 95 aa-2.77□□□□□ -2.85
RNU6-238P-201ENST00000363313 NCALDP61601 193 aa-2.77□□□□□ -2.85
RNU6-238P-201ENST00000363313 RTL8BQ17RB0 113 aa-2.77□□□□□ -2.85
RNU6-238P-201ENST00000363313 SCGB2B2Q4G0G5 96 aa-2.77□□□□□ -2.85
RNU6-238P-201ENST00000363313 RTL8AQ9BWD3 113 aa-2.77□□□□□ -2.85
RNU6-238P-201ENST00000363313 OTORQ9NRC9 128 aa-2.77□□□□□ -2.85
RNU6-238P-201ENST00000363313 CCDC171Q6TFL3 1326 aa-2.77□□□□□ -2.85
RNU6-238P-201ENST00000363313 LRBAP50851 2863 aa-2.77□□□□□ -2.85
RNU6-238P-201ENST00000363313 NUP210Q8TEM1 1887 aaPredicted RBP-2.77□□□□□ -2.85
RNU6-238P-201ENST00000363313 MAGI1Q96QZ7 1491 aaPredicted RBP-2.77□□□□□ -2.85
RNU6-238P-201ENST00000363313 FABP2P12104 132 aa-2.78□□□□□ -2.85
RNU6-238P-201ENST00000363313 MRPS15P82914 257 aaKnown RBP-2.78□□□□□ -2.85
RNU6-238P-201ENST00000363313 SMIM4Q8WVI0 70 aa-2.78□□□□□ -2.85
RNU6-238P-201ENST00000363313 LRTM1Q9HBL6 345 aa-2.78□□□□□ -2.85
RNU6-238P-201ENST00000363313 GUCA1BQ9UMX6 200 aa-2.78□□□□□ -2.85
RNU6-238P-201ENST00000363313 LRRC37A3O60309 1634 aa-2.79□□□□□ -2.86
RNU6-238P-201ENST00000363313 TRBV27A0A0K0K1C4 114 aa-2.79□□□□□ -2.86
RNU6-238P-201ENST00000363313 H3BQV1 296 aa-2.79□□□□□ -2.86
RNU6-238P-201ENST00000363313 PGRMC1O00264 195 aaKnown RBP-2.79□□□□□ -2.86
RNU6-238P-201ENST00000363313 TMEM97Q5BJF2 176 aa-2.79□□□□□ -2.86
RNU6-238P-201ENST00000363313 CCDC122Q5T0U0 273 aa-2.79□□□□□ -2.86
RNU6-238P-201ENST00000363313 CCDC144AA2RUR9 1427 aa-2.79□□□□□ -2.86
RNU6-238P-201ENST00000363313 POLA1P09884 1462 aaPredicted RBP-2.79□□□□□ -2.86
RNU6-238P-201ENST00000363313 PRDM2Q13029 1718 aa-2.79□□□□□ -2.86
RNU6-238P-201ENST00000363313 KNDC1Q76NI1 1749 aa-2.79□□□□□ -2.86
RNU6-238P-201ENST00000363313 RIIAD1A6NNX1 92 aa-2.8□□□□□ -2.86
RNU6-238P-201ENST00000363313 NDUFC2O95298 119 aa-2.8□□□□□ -2.86
RNU6-238P-201ENST00000363313 CCL18P55774 89 aa-2.8□□□□□ -2.86
RNU6-238P-201ENST00000363313 C9orf116Q5BN46 136 aaPredicted RBP-2.8□□□□□ -2.86
RNU6-238P-201ENST00000363313 USMG5Q96IX5 58 aa-2.8□□□□□ -2.86
RNU6-238P-201ENST00000363313 CARD19Q96LW7 228 aa-2.8□□□□□ -2.86
RNU6-238P-201ENST00000363313 CHMP4BQ9H444 224 aaKnown RBP-2.8□□□□□ -2.86
RNU6-238P-201ENST00000363313 USE1Q9NZ43 259 aa-2.8□□□□□ -2.86
RNU6-238P-201ENST00000363313 PATJQ8NI35 1801 aa-2.8□□□□□ -2.86
RNU6-238P-201ENST00000363313 MYH8P13535 1937 aa-2.8□□□□□ -2.86
RNU6-238P-201ENST00000363313 TRBV7-4A0A0J9YYF1 115 aa-2.81□□□□□ -2.86
RNU6-238P-201ENST00000363313 AIPO00170 330 aa-2.81□□□□□ -2.86
RNU6-238P-201ENST00000363313 UBE2D1P51668 147 aa-2.81□□□□□ -2.86
RNU6-238P-201ENST00000363313 UBE2D3P61077 147 aa-2.81□□□□□ -2.86
RNU6-238P-201ENST00000363313 UBE2D2P62837 147 aa-2.81□□□□□ -2.86
RNU6-238P-201ENST00000363313 DYNLRB2Q8TF09 96 aa-2.81□□□□□ -2.86
RNU6-238P-201ENST00000363313 PAIP2Q9BPZ3 127 aaKnown RBP-2.81□□□□□ -2.86
RNU6-238P-201ENST00000363313 SPTBN5Q9NRC6 3674 aaKnown RBP-2.81□□□□□ -2.86
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms