RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 A0A0J9YY99 117 aa10.48□□□□□ -0.73
VCP-201ENST00000358901 PRSS47A8MTI9 375 aa10.48□□□□□ -0.73
VCP-201ENST00000358901 OPRPNQ99935 248 aaPredicted RBP10.48□□□□□ -0.73
VCP-201ENST00000358901 IGLC6P0CF74 106 aa10.47□□□□□ -0.73
VCP-201ENST00000358901 GPHB5Q86YW7 130 aa10.47□□□□□ -0.73
VCP-201ENST00000358901 LINC01620Q4KN68 170 aa10.47□□□□□ -0.73
VCP-201ENST00000358901 CHD8Q9HCK8 2581 aa10.47□□□□□ -0.73
VCP-201ENST00000358901 PRRC2CQ9Y520 2896 aaKnown RBP10.47□□□□□ -0.73
VCP-201ENST00000358901 B5MCH6 92 aa10.47□□□□□ -0.73
VCP-201ENST00000358901 MED14OSP0DP75 135 aa10.46□□□□□ -0.73
VCP-201ENST00000358901 UBE2DNLQ8IWF7 75 aa10.46□□□□□ -0.73
VCP-201ENST00000358901 F8WEM9 126 aa10.46□□□□□ -0.74
VCP-201ENST00000358901 IGHG4P01861 327 aa10.46□□□□□ -0.74
VCP-201ENST00000358901 CRIP1P50238 77 aa10.46□□□□□ -0.74
VCP-201ENST00000358901 LMO4P61968 165 aa10.46□□□□□ -0.74
VCP-201ENST00000358901 C3orf56Q8N813 242 aa10.46□□□□□ -0.74
VCP-201ENST00000358901 PTH2Q96A98 100 aa10.46□□□□□ -0.74
VCP-201ENST00000358901 C10orf142B7Z368 130 aa10.45□□□□□ -0.74
VCP-201ENST00000358901 PSCAO43653 123 aa10.45□□□□□ -0.74
VCP-201ENST00000358901 SPTBN4Q9H254 2564 aa10.45□□□□□ -0.74
VCP-201ENST00000358901 ODF3BA8MYP8 253 aa10.45□□□□□ -0.74
VCP-201ENST00000358901 Q6ZQT7 251 aa10.45□□□□□ -0.74
VCP-201ENST00000358901 C20orf203Q8NBC4 194 aa10.45□□□□□ -0.74
VCP-201ENST00000358901 HERV-K104P63124 156 aa10.44□□□□□ -0.74
VCP-201ENST00000358901 TMEM61Q8N0U2 210 aa10.44□□□□□ -0.74
VCP-201ENST00000358901 ICOSQ9Y6W8 199 aa10.44□□□□□ -0.74
VCP-201ENST00000358901 TRAV25A0A0B4J276 109 aa10.44□□□□□ -0.74
VCP-201ENST00000358901 A0A0J9YX75 114 aa10.44□□□□□ -0.74
VCP-201ENST00000358901 CRYGBP07316 175 aa10.44□□□□□ -0.74
VCP-201ENST00000358901 SND1-IT1Q9HBX3 110 aa10.44□□□□□ -0.74
VCP-201ENST00000358901 NUP210LQ5VU65 1888 aa10.44□□□□□ -0.74
VCP-201ENST00000358901 TRAV4A0A0B4J268 109 aa10.44□□□□□ -0.74
VCP-201ENST00000358901 APOC4P55056 127 aa10.44□□□□□ -0.74
VCP-201ENST00000358901 IGF1P05019 195 aa10.44□□□□□ -0.74
VCP-201ENST00000358901 MYCNOSP40205 109 aa10.44□□□□□ -0.74
VCP-201ENST00000358901 FOXI1Q12951 378 aa10.44□□□□□ -0.74
VCP-201ENST00000358901 RNF152Q8N8N0 203 aa10.43□□□□□ -0.74
VCP-201ENST00000358901 NKAPP1Q8N9T2 125 aa10.43□□□□□ -0.74
VCP-201ENST00000358901 IGLV10-54A0A075B6I4 117 aa10.42□□□□□ -0.74
VCP-201ENST00000358901 PRB1P04280 392 aa10.42□□□□□ -0.74
VCP-201ENST00000358901 CEMP1Q6PRD7 247 aaPredicted RBP10.42□□□□□ -0.74
VCP-201ENST00000358901 TRBV7-3A0A075B6L6 115 aa10.42□□□□□ -0.74
VCP-201ENST00000358901 K7EQD1 137 aa10.42□□□□□ -0.74
VCP-201ENST00000358901 G3V4G9 280 aa10.42□□□□□ -0.74
VCP-201ENST00000358901 IGKV2D-26A0A0A0MRZ7 120 aa10.41□□□□□ -0.74
VCP-201ENST00000358901 GYPEP15421 78 aa10.41□□□□□ -0.74
VCP-201ENST00000358901 DEFB113Q30KQ7 82 aa10.41□□□□□ -0.74
VCP-201ENST00000358901 DSCR8Q96T75 97 aa10.41□□□□□ -0.74
VCP-201ENST00000358901 DAZ2Q13117 558 aaKnown RBP10.41□□□□□ -0.74
VCP-201ENST00000358901 DAZ4Q86SG3 579 aaKnown RBP10.41□□□□□ -0.74
VCP-201ENST00000358901 DAZ3Q9NR90 486 aaKnown RBP10.41□□□□□ -0.74
VCP-201ENST00000358901 IGHV3-30-3P0DP02 117 aa10.41□□□□□ -0.74
VCP-201ENST00000358901 RPL32P62910 135 aaKnown RBP10.41□□□□□ -0.74
VCP-201ENST00000358901 HIST2H2BCQ6DN03 193 aa10.41□□□□□ -0.74
VCP-201ENST00000358901 VSIG2Q96IQ7 327 aa10.41□□□□□ -0.74
VCP-201ENST00000358901 A6NDX4 124 aa10.4□□□□□ -0.74
VCP-201ENST00000358901 MUC22E2RYF6 1773 aaPredicted RBP10.4□□□□□ -0.74
VCP-201ENST00000358901 ATP6V0E2Q8NHE4 81 aa10.4□□□□□ -0.74
VCP-201ENST00000358901 ESM1Q9NQ30 184 aa10.4□□□□□ -0.74
VCP-201ENST00000358901 IGLV2-11P01706 119 aa10.39□□□□□ -0.75
VCP-201ENST00000358901 NDUFA11Q86Y39 141 aa10.39□□□□□ -0.75
VCP-201ENST00000358901 ORMDL1Q9P0S3 153 aa10.39□□□□□ -0.75
VCP-201ENST00000358901 CLEC2BQ92478 149 aa10.39□□□□□ -0.75
VCP-201ENST00000358901 BPTFQ12830 3046 aa10.39□□□□□ -0.75
VCP-201ENST00000358901 IGHV1-58A0A0C4DH39 117 aa10.38□□□□□ -0.75
VCP-201ENST00000358901 LY6LH3BQJ8 138 aa10.38□□□□□ -0.75
VCP-201ENST00000358901 P0DMU3 169 aa10.38□□□□□ -0.75
VCP-201ENST00000358901 FAM231AP0DMU4 169 aa10.38□□□□□ -0.75
VCP-201ENST00000358901 FAM231CP0DMU5 169 aa10.38□□□□□ -0.75
VCP-201ENST00000358901 TMEM126AQ9H061 195 aa10.38□□□□□ -0.75
VCP-201ENST00000358901 C16orf74Q96GX8 76 aa10.38□□□□□ -0.75
VCP-201ENST00000358901 MTORP42345 2549 aa10.38□□□□□ -0.75
VCP-201ENST00000358901 ZFAND3Q9H8U3 227 aa10.38□□□□□ -0.75
VCP-201ENST00000358901 SMAD5-AS1Q9Y6J3 95 aa10.38□□□□□ -0.75
VCP-201ENST00000358901 SPANXDQ9BXN6 97 aa10.37□□□□□ -0.75
VCP-201ENST00000358901 COX7B2Q8TF08 81 aa10.37□□□□□ -0.75
VCP-201ENST00000358901 SS18L2Q9UHA2 77 aa10.37□□□□□ -0.75
VCP-201ENST00000358901 H0YGX0 51 aa10.37□□□□□ -0.75
VCP-201ENST00000358901 ACYP1P07311 99 aa10.37□□□□□ -0.75
VCP-201ENST00000358901 LINC00310P59036 64 aa10.37□□□□□ -0.75
VCP-201ENST00000358901 MAPKAPK5-AS1Q8N8E1 139 aa10.37□□□□□ -0.75
VCP-201ENST00000358901 J3QKU1 62 aa10.36□□□□□ -0.75
VCP-201ENST00000358901 PIFOQ8TCI5 191 aa10.36□□□□□ -0.75
VCP-201ENST00000358901 C20orf173Q96LM9 149 aa10.36□□□□□ -0.75
VCP-201ENST00000358901 PRO3102Q9H379 93 aa10.36□□□□□ -0.75
VCP-201ENST00000358901 TRBV10-2A0A0K0K1G8 114 aa10.36□□□□□ -0.75
VCP-201ENST00000358901 EBI3Q14213 229 aa10.36□□□□□ -0.75
VCP-201ENST00000358901 Q6ZUT4 128 aa10.36□□□□□ -0.75
VCP-201ENST00000358901 TM2D2Q9BX73 214 aa10.36□□□□□ -0.75
VCP-201ENST00000358901 LRRK2Q5S007 2527 aa10.36□□□□□ -0.75
VCP-201ENST00000358901 LGALS9O00182 355 aa10.36□□□□□ -0.75
VCP-201ENST00000358901 ZFAND2AQ8N6M9 145 aa10.36□□□□□ -0.75
VCP-201ENST00000358901 TMEM89A2RUT3 159 aa10.35□□□□□ -0.75
VCP-201ENST00000358901 RNF185Q96GF1 192 aa10.35□□□□□ -0.75
VCP-201ENST00000358901 TCL1BO95988 128 aa10.35□□□□□ -0.75
VCP-201ENST00000358901 TRACP01848 142 aa10.35□□□□□ -0.75
VCP-201ENST00000358901 NEXN-AS1Q8NBZ9 246 aa10.35□□□□□ -0.75
VCP-201ENST00000358901 TNFRSF13BO14836 293 aaPredicted RBP10.35□□□□□ -0.75
VCP-201ENST00000358901 PRRC2AP48634 2157 aaKnown RBP10.34□□□□□ -0.75
VCP-201ENST00000358901 IGKV3D-7A0A0C4DH55 119 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms