RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 LINC00322Q6ZN03 302 aaPredicted RBP4.72□□□□□ -1.65
VPS13B-203ENST00000358544 FANCD2OSQ96PS1 177 aa4.72□□□□□ -1.65
VPS13B-203ENST00000358544 MDS2Q8NDY4 140 aa4.72□□□□□ -1.65
VPS13B-203ENST00000358544 PROK2Q9HC23 129 aa4.72□□□□□ -1.65
VPS13B-203ENST00000358544 SS18Q15532 418 aa4.72□□□□□ -1.65
VPS13B-203ENST00000358544 IGHV1-69P01742 117 aa4.72□□□□□ -1.65
VPS13B-203ENST00000358544 COX7A2LO14548 114 aa4.72□□□□□ -1.65
VPS13B-203ENST00000358544 FUSP35637 526 aaKnown RBP eCLIP4.72□□□□□ -1.65
VPS13B-203ENST00000358544 RPL39P62891 51 aaKnown RBP4.72□□□□□ -1.65
VPS13B-203ENST00000358544 LYPD2Q6UXB3 125 aa4.72□□□□□ -1.65
VPS13B-203ENST00000358544 COL5A1P20908 1838 aaPredicted RBP4.72□□□□□ -1.65
VPS13B-203ENST00000358544 K7EIM0 57 aa4.72□□□□□ -1.65
VPS13B-203ENST00000358544 C1orf195Q5TG92 126 aa4.72□□□□□ -1.65
VPS13B-203ENST00000358544 C11orf53Q8IXP5 236 aa4.72□□□□□ -1.65
VPS13B-203ENST00000358544 NEXN-AS1Q8NBZ9 246 aa4.72□□□□□ -1.65
VPS13B-203ENST00000358544 TRIAP1O43715 76 aa4.72□□□□□ -1.65
VPS13B-203ENST00000358544 CRYGCP07315 174 aa4.72□□□□□ -1.65
VPS13B-203ENST00000358544 C17orf82Q86X59 251 aaPredicted RBP4.72□□□□□ -1.65
VPS13B-203ENST00000358544 GNRH2O43555 120 aa4.71□□□□□ -1.65
VPS13B-203ENST00000358544 CDK2AP2O75956 126 aa4.71□□□□□ -1.65
VPS13B-203ENST00000358544 CXCL5P42830 114 aa4.71□□□□□ -1.65
VPS13B-203ENST00000358544 CRIP3Q6Q6R5 217 aa4.71□□□□□ -1.65
VPS13B-203ENST00000358544 TRBV30A0A0K0K1B3 111 aa4.71□□□□□ -1.65
VPS13B-203ENST00000358544 PF4P02776 101 aa4.71□□□□□ -1.65
VPS13B-203ENST00000358544 MP68P56378 58 aa4.71□□□□□ -1.65
VPS13B-203ENST00000358544 MRPS36P82909 103 aaKnown RBP4.71□□□□□ -1.66
VPS13B-203ENST00000358544 C20orf197Q8N268 126 aa4.71□□□□□ -1.66
VPS13B-203ENST00000358544 MAPKAPK5-AS1Q8N8E1 139 aa4.71□□□□□ -1.66
VPS13B-203ENST00000358544 C20orf173Q96LM9 149 aa4.71□□□□□ -1.66
VPS13B-203ENST00000358544 ZNF503-AS2A6NEH8 195 aa4.71□□□□□ -1.66
VPS13B-203ENST00000358544 OVOL3O00110 214 aa4.71□□□□□ -1.66
VPS13B-203ENST00000358544 LINC01619G3V211 115 aa4.71□□□□□ -1.66
VPS13B-203ENST00000358544 ATP6V0E1O15342 81 aa4.71□□□□□ -1.66
VPS13B-203ENST00000358544 IGHV3-30P01768 117 aa4.71□□□□□ -1.66
VPS13B-203ENST00000358544 IGHV3-30-5P0DP03 117 aa4.71□□□□□ -1.66
VPS13B-203ENST00000358544 SDIM1Q6ZPB5 146 aa4.71□□□□□ -1.66
VPS13B-203ENST00000358544 STHQ8IWL8 128 aa4.71□□□□□ -1.66
VPS13B-203ENST00000358544 I3L2K1 104 aa4.71□□□□□ -1.66
VPS13B-203ENST00000358544 OPRPNQ99935 248 aaPredicted RBP4.71□□□□□ -1.66
VPS13B-203ENST00000358544 Q9HAA7 133 aa4.71□□□□□ -1.66
VPS13B-203ENST00000358544 NDUFA4O00483 81 aa4.71□□□□□ -1.66
VPS13B-203ENST00000358544 IGHV3-38A0A0C4DH36 116 aa4.7□□□□□ -1.66
VPS13B-203ENST00000358544 SPRY2O43597 315 aa4.7□□□□□ -1.66
VPS13B-203ENST00000358544 COX7CP15954 63 aa4.7□□□□□ -1.66
VPS13B-203ENST00000358544 IGLV2-23P01705 113 aa4.7□□□□□ -1.66
VPS13B-203ENST00000358544 FLNCQ14315 2725 aa4.7□□□□□ -1.66
VPS13B-203ENST00000358544 WFDC9Q8NEX5 89 aa4.7□□□□□ -1.66
VPS13B-203ENST00000358544 SND1-IT1Q9HBX3 110 aa4.7□□□□□ -1.66
VPS13B-203ENST00000358544 LECT2O14960 151 aa4.7□□□□□ -1.66
VPS13B-203ENST00000358544 ZNF491Q8N8L2 437 aa4.7□□□□□ -1.66
VPS13B-203ENST00000358544 TRAV12-2A0A075B6T6 113 aa4.7□□□□□ -1.66
VPS13B-203ENST00000358544 USP17L23D6RBM5 183 aa4.7□□□□□ -1.66
VPS13B-203ENST00000358544 DAD1P61803 113 aa4.7□□□□□ -1.66
VPS13B-203ENST00000358544 COX7B2Q8TF08 81 aa4.7□□□□□ -1.66
VPS13B-203ENST00000358544 GATA3P23771 443 aa4.7□□□□□ -1.66
VPS13B-203ENST00000358544 JMJD7-PLA2G4BH0Y9G9 81 aa4.7□□□□□ -1.66
VPS13B-203ENST00000358544 A0A0J9YXY3 114 aa4.69□□□□□ -1.66
VPS13B-203ENST00000358544 UBE2E1P51965 193 aa4.69□□□□□ -1.66
VPS13B-203ENST00000358544 WFDC11Q8NEX6 87 aa4.69□□□□□ -1.66
VPS13B-203ENST00000358544 CDIP1Q9H305 208 aa4.69□□□□□ -1.66
VPS13B-203ENST00000358544 Q6JHZ5 121 aa4.69□□□□□ -1.66
VPS13B-203ENST00000358544 MRPL36Q9P0J6 103 aaKnown RBP4.69□□□□□ -1.66
VPS13B-203ENST00000358544 FDCSPQ8NFU4 85 aa4.69□□□□□ -1.66
VPS13B-203ENST00000358544 MED14OSP0DP75 135 aa4.69□□□□□ -1.66
VPS13B-203ENST00000358544 Q6ZPA2 131 aa4.69□□□□□ -1.66
VPS13B-203ENST00000358544 SPTSSBQ8NFR3 76 aa4.69□□□□□ -1.66
VPS13B-203ENST00000358544 MPLKIPQ8TAP9 179 aa4.69□□□□□ -1.66
VPS13B-203ENST00000358544 APCP25054 2843 aa4.69□□□□□ -1.66
VPS13B-203ENST00000358544 IGKV1D-37A0A075B6S9 117 aa4.69□□□□□ -1.66
VPS13B-203ENST00000358544 RPL18AQ02543 176 aaKnown RBP4.69□□□□□ -1.66
VPS13B-203ENST00000358544 G3V318 75 aa4.69□□□□□ -1.66
VPS13B-203ENST00000358544 TRAV25A0A0B4J276 109 aa4.69□□□□□ -1.66
VPS13B-203ENST00000358544 A0A0J9YY99 117 aa4.69□□□□□ -1.66
VPS13B-203ENST00000358544 PRB2P02812 416 aaPredicted RBP4.69□□□□□ -1.66
VPS13B-203ENST00000358544 IGHV3-30-3P0DP02 117 aa4.68□□□□□ -1.66
VPS13B-203ENST00000358544 ZNF22P17026 224 aaPredicted RBP4.68□□□□□ -1.66
VPS13B-203ENST00000358544 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.68□□□□□ -1.66
VPS13B-203ENST00000358544 TRAV23DV6A0A075B6W5 121 aa4.68□□□□□ -1.66
VPS13B-203ENST00000358544 IGKV2-29A2NJV5 120 aaPredicted RBP4.68□□□□□ -1.66
VPS13B-203ENST00000358544 ZNF672Q499Z4 452 aaPredicted RBP4.68□□□□□ -1.66
VPS13B-203ENST00000358544 ENHOQ6UWT2 76 aa4.68□□□□□ -1.66
VPS13B-203ENST00000358544 C7orf69Q9H7B7 122 aa4.68□□□□□ -1.66
VPS13B-203ENST00000358544 IGHV7-4-1A0A0J9YVY3 117 aa4.68□□□□□ -1.66
VPS13B-203ENST00000358544 SPINK13Q1W4C9 94 aa4.68□□□□□ -1.66
VPS13B-203ENST00000358544 TIMM17BO60830 172 aa4.68□□□□□ -1.66
VPS13B-203ENST00000358544 BRWD1-AS2P59051 145 aa4.68□□□□□ -1.66
VPS13B-203ENST00000358544 CCL19Q99731 98 aa4.68□□□□□ -1.66
VPS13B-203ENST00000358544 MLST8Q9BVC4 326 aa4.68□□□□□ -1.66
VPS13B-203ENST00000358544 IGHV3-33P01772 117 aa4.68□□□□□ -1.66
VPS13B-203ENST00000358544 PIP4P2Q8N4L2 257 aa4.68□□□□□ -1.66
VPS13B-203ENST00000358544 DAZ2Q13117 558 aaKnown RBP4.68□□□□□ -1.66
VPS13B-203ENST00000358544 DIAPH2-AS1Q14236 149 aa4.68□□□□□ -1.66
VPS13B-203ENST00000358544 DAZ4Q86SG3 579 aaKnown RBP4.68□□□□□ -1.66
VPS13B-203ENST00000358544 DEFB123Q8N688 67 aa4.68□□□□□ -1.66
VPS13B-203ENST00000358544 DAZ3Q9NR90 486 aaKnown RBP4.68□□□□□ -1.66
VPS13B-203ENST00000358544 Q6ZQT7 251 aa4.67□□□□□ -1.66
VPS13B-203ENST00000358544 NRGNQ92686 78 aa4.67□□□□□ -1.66
VPS13B-203ENST00000358544 PPDPFQ9H3Y8 114 aa4.67□□□□□ -1.66
VPS13B-203ENST00000358544 IGLV2-11P01706 119 aa4.67□□□□□ -1.66
VPS13B-203ENST00000358544 TMEM263Q8WUH6 116 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms