RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 C14orf178Q8N769 122 aaPredicted RBP7.07□□□□□ -1.28
SMARCAL1-202ENST00000358207 EEF1AKMT3Q96AZ1 226 aa7.07□□□□□ -1.28
SMARCAL1-202ENST00000358207 C17orf77Q96MU5 243 aa7.07□□□□□ -1.28
SMARCAL1-202ENST00000358207 SPANXCQ9NY87 97 aa7.07□□□□□ -1.28
SMARCAL1-202ENST00000358207 APELAP0DMC3 54 aa7.07□□□□□ -1.28
SMARCAL1-202ENST00000358207 LOXL3P58215 753 aa7.07□□□□□ -1.28
SMARCAL1-202ENST00000358207 C10orf105Q8TEF2 133 aa7.07□□□□□ -1.28
SMARCAL1-202ENST00000358207 TPSG1Q9NRR2 321 aa7.07□□□□□ -1.28
SMARCAL1-202ENST00000358207 TRAV12-1A0A0B4J245 112 aa7.07□□□□□ -1.28
SMARCAL1-202ENST00000358207 SPRY2O43597 315 aa7.07□□□□□ -1.28
SMARCAL1-202ENST00000358207 C17orf58Q2M2W7 97 aa7.07□□□□□ -1.28
SMARCAL1-202ENST00000358207 TMEM170BQ5T4T1 132 aa7.07□□□□□ -1.28
SMARCAL1-202ENST00000358207 TMEM200BQ69YZ2 307 aa7.07□□□□□ -1.28
SMARCAL1-202ENST00000358207 THAP8Q8NA92 274 aa7.07□□□□□ -1.28
SMARCAL1-202ENST00000358207 LY6LH3BQJ8 138 aa7.06□□□□□ -1.28
SMARCAL1-202ENST00000358207 SH2D1AO60880 128 aa7.06□□□□□ -1.28
SMARCAL1-202ENST00000358207 NDUFB3O43676 98 aa7.06□□□□□ -1.28
SMARCAL1-202ENST00000358207 IGKV1-16P04430 117 aa7.06□□□□□ -1.28
SMARCAL1-202ENST00000358207 PFN2P35080 140 aa7.06□□□□□ -1.28
SMARCAL1-202ENST00000358207 LAGE3Q14657 143 aa7.06□□□□□ -1.28
SMARCAL1-202ENST00000358207 UPK3BQ9BT76 320 aa7.06□□□□□ -1.28
SMARCAL1-202ENST00000358207 J3QQQ9 107 aa7.05□□□□□ -1.28
SMARCAL1-202ENST00000358207 C5orf38Q86SI9 138 aa7.05□□□□□ -1.28
SMARCAL1-202ENST00000358207 SLC25A29Q8N8R3 303 aa7.05□□□□□ -1.28
SMARCAL1-202ENST00000358207 TMEM75Q8N9X5 138 aa7.05□□□□□ -1.28
SMARCAL1-202ENST00000358207 NEXN-AS1Q8NBZ9 246 aa7.05□□□□□ -1.28
SMARCAL1-202ENST00000358207 WFDC11Q8NEX6 87 aa7.05□□□□□ -1.28
SMARCAL1-202ENST00000358207 CCL19Q99731 98 aa7.05□□□□□ -1.28
SMARCAL1-202ENST00000358207 ATP5G1P05496 136 aa7.05□□□□□ -1.28
SMARCAL1-202ENST00000358207 EGR2P11161 476 aaPredicted RBP7.05□□□□□ -1.28
SMARCAL1-202ENST00000358207 TSPEAR-AS2P59090 65 aa7.05□□□□□ -1.28
SMARCAL1-202ENST00000358207 MAPK1IP1LQ8NDC0 245 aa7.05□□□□□ -1.28
SMARCAL1-202ENST00000358207 KLK15Q9H2R5 256 aa7.05□□□□□ -1.28
SMARCAL1-202ENST00000358207 ANK2Q01484 3957 aa7.05□□□□□ -1.28
SMARCAL1-202ENST00000358207 TRAV13-1A0A0B4J241 112 aa7.04□□□□□ -1.28
SMARCAL1-202ENST00000358207 FAM236DA0A1B0GTK5 79 aa7.04□□□□□ -1.28
SMARCAL1-202ENST00000358207 TRIAP1O43715 76 aa7.04□□□□□ -1.28
SMARCAL1-202ENST00000358207 SAA2P0DJI9 122 aaPredicted RBP7.04□□□□□ -1.28
SMARCAL1-202ENST00000358207 FAM236CP0DP71 79 aa7.04□□□□□ -1.28
SMARCAL1-202ENST00000358207 SHANK2-AS3Q9BTD1 123 aa7.04□□□□□ -1.28
SMARCAL1-202ENST00000358207 DPH3P1Q9H4G8 78 aa7.04□□□□□ -1.28
SMARCAL1-202ENST00000358207 M0R3E3 92 aa7.04□□□□□ -1.28
SMARCAL1-202ENST00000358207 LY6G6DO95868 133 aa7.04□□□□□ -1.28
SMARCAL1-202ENST00000358207 AVPP01185 164 aa7.04□□□□□ -1.28
SMARCAL1-202ENST00000358207 HIST1H4AP62805 103 aaKnown RBP7.04□□□□□ -1.28
SMARCAL1-202ENST00000358207 IL17RELQ6ZVW7 336 aa7.04□□□□□ -1.28
SMARCAL1-202ENST00000358207 IGHV3OR16-10A0A075B7F0 116 aa7.04□□□□□ -1.28
SMARCAL1-202ENST00000358207 WT1-ASQ06250 92 aa7.04□□□□□ -1.28
SMARCAL1-202ENST00000358207 C8orf31Q8N9H6 132 aa7.04□□□□□ -1.28
SMARCAL1-202ENST00000358207 V9GYY9 64 aa7.04□□□□□ -1.28
SMARCAL1-202ENST00000358207 NDUFA4L2Q9NRX3 87 aa7.03□□□□□ -1.28
SMARCAL1-202ENST00000358207 TRAV26-2A0A0B4J265 109 aa7.03□□□□□ -1.28
SMARCAL1-202ENST00000358207 CGB1A6NKQ9 187 aa7.03□□□□□ -1.28
SMARCAL1-202ENST00000358207 C10orf55Q5SWW7 151 aa7.03□□□□□ -1.28
SMARCAL1-202ENST00000358207 LINC00643Q86TS7 51 aa7.03□□□□□ -1.28
SMARCAL1-202ENST00000358207 LINC00311Q8N616 119 aa7.03□□□□□ -1.28
SMARCAL1-202ENST00000358207 NRACQ8N912 160 aa7.03□□□□□ -1.28
SMARCAL1-202ENST00000358207 JMJD1CQ15652 2540 aa7.03□□□□□ -1.28
SMARCAL1-202ENST00000358207 SAA1P0DJI8 122 aaPredicted RBP7.02□□□□□ -1.29
SMARCAL1-202ENST00000358207 ZNF80P51504 273 aaPredicted RBP7.02□□□□□ -1.29
SMARCAL1-202ENST00000358207 ZNF415Q09FC8 603 aa7.02□□□□□ -1.29
SMARCAL1-202ENST00000358207 AMELXQ99217 191 aa7.02□□□□□ -1.29
SMARCAL1-202ENST00000358207 AGPAT4-IT1Q9H0P7 198 aa7.02□□□□□ -1.29
SMARCAL1-202ENST00000358207 H3BT86 120 aa7.02□□□□□ -1.29
SMARCAL1-202ENST00000358207 Q1RN00 199 aa7.02□□□□□ -1.29
SMARCAL1-202ENST00000358207 BPESC1Q9GZL8 116 aa7.02□□□□□ -1.29
SMARCAL1-202ENST00000358207 TRBV7-1A0A0A6YYK4 115 aa7.02□□□□□ -1.29
SMARCAL1-202ENST00000358207 IGHV3-21A0A0B4J1V1 117 aa7.02□□□□□ -1.29
SMARCAL1-202ENST00000358207 ERHP84090 104 aaKnown RBP7.01□□□□□ -1.29
SMARCAL1-202ENST00000358207 SDIM1Q6ZPB5 146 aa7.01□□□□□ -1.29
SMARCAL1-202ENST00000358207 PRIMA1Q86XR5 153 aa7.01□□□□□ -1.29
SMARCAL1-202ENST00000358207 C9orf85Q96MD7 179 aa7.01□□□□□ -1.29
SMARCAL1-202ENST00000358207 SCGB3A1Q96QR1 104 aa7.01□□□□□ -1.29
SMARCAL1-202ENST00000358207 A0A0B4J2C4 111 aa7.01□□□□□ -1.29
SMARCAL1-202ENST00000358207 TRBV30A0A0K0K1B3 111 aa7.01□□□□□ -1.29
SMARCAL1-202ENST00000358207 TRGV3P03979 118 aa7.01□□□□□ -1.29
SMARCAL1-202ENST00000358207 CLEC2BQ92478 149 aa7.01□□□□□ -1.29
SMARCAL1-202ENST00000358207 Q96MF0 132 aa7.01□□□□□ -1.29
SMARCAL1-202ENST00000358207 SPANXDQ9BXN6 97 aa7.01□□□□□ -1.29
SMARCAL1-202ENST00000358207 TMEM223A0PJW6 202 aa7□□□□□ -1.29
SMARCAL1-202ENST00000358207 C11orf86A6NJI1 115 aa7□□□□□ -1.29
SMARCAL1-202ENST00000358207 CGB3P0DN86 165 aa7□□□□□ -1.29
SMARCAL1-202ENST00000358207 CGB7P0DN87 165 aa7□□□□□ -1.29
SMARCAL1-202ENST00000358207 RHOHQ15669 191 aa7□□□□□ -1.29
SMARCAL1-202ENST00000358207 TRBV19A0A075B6N1 114 aa7□□□□□ -1.29
SMARCAL1-202ENST00000358207 MUSTN1Q8IVN3 82 aa7□□□□□ -1.29
SMARCAL1-202ENST00000358207 NOTCH3Q9UM47 2321 aa7□□□□□ -1.29
SMARCAL1-202ENST00000358207 F8P00451 2351 aa7□□□□□ -1.29
SMARCAL1-202ENST00000358207 ATOX1O00244 68 aa6.99□□□□□ -1.29
SMARCAL1-202ENST00000358207 ZFP36P26651 326 aaKnown RBP6.99□□□□□ -1.29
SMARCAL1-202ENST00000358207 CNFNQ9BYD5 112 aa6.99□□□□□ -1.29
SMARCAL1-202ENST00000358207 WNK1Q9H4A3 2382 aa6.99□□□□□ -1.29
SMARCAL1-202ENST00000358207 CXCL5P42830 114 aa6.99□□□□□ -1.29
SMARCAL1-202ENST00000358207 TMEM14CQ9P0S9 112 aa6.99□□□□□ -1.29
SMARCAL1-202ENST00000358207 TEP1Q99973 2627 aaKnown RBP6.99□□□□□ -1.29
SMARCAL1-202ENST00000358207 ERCC8Q13216 396 aa6.99□□□□□ -1.29
SMARCAL1-202ENST00000358207 IGLV4-69A0A075B6H9 119 aa6.98□□□□□ -1.29
SMARCAL1-202ENST00000358207 ACYP1P07311 99 aa6.98□□□□□ -1.29
SMARCAL1-202ENST00000358207 LYZP61626 148 aa6.98□□□□□ -1.29
SMARCAL1-202ENST00000358207 LINC01561Q8N1V8 128 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms