RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 FAM229AH3BQW9 127 aa4.41□□□□□ -1.7
BRCA1-203ENST00000357654 C19orf84I3L1E1 186 aa4.41□□□□□ -1.7
BRCA1-203ENST00000357654 LINC00114Q6XXX2 140 aa4.41□□□□□ -1.7
BRCA1-203ENST00000357654 TMEM190Q8WZ59 177 aa4.41□□□□□ -1.7
BRCA1-203ENST00000357654 KMT2EQ8IZD2 1858 aa4.41□□□□□ -1.7
BRCA1-203ENST00000357654 IGLC1P0CG04 106 aa4.41□□□□□ -1.7
BRCA1-203ENST00000357654 C18orf32Q8TCD1 76 aa4.41□□□□□ -1.7
BRCA1-203ENST00000357654 CCKP06307 115 aa4.41□□□□□ -1.7
BRCA1-203ENST00000357654 SDIM1Q6ZPB5 146 aa4.41□□□□□ -1.7
BRCA1-203ENST00000357654 SNURFQ9Y675 71 aa4.41□□□□□ -1.7
BRCA1-203ENST00000357654 MIFP14174 115 aa4.41□□□□□ -1.7
BRCA1-203ENST00000357654 RPL28P46779 137 aaKnown RBP4.41□□□□□ -1.7
BRCA1-203ENST00000357654 ZNF503-AS2A6NEH8 195 aa4.4□□□□□ -1.7
BRCA1-203ENST00000357654 LGALS9BQ3B8N2 356 aa4.4□□□□□ -1.7
BRCA1-203ENST00000357654 PCOTHQ58A44 107 aa4.4□□□□□ -1.7
BRCA1-203ENST00000357654 LGALS9CQ6DKI2 356 aa4.4□□□□□ -1.7
BRCA1-203ENST00000357654 ALPK2Q86TB3 2170 aa4.4□□□□□ -1.7
BRCA1-203ENST00000357654 M0QXV9 152 aa4.4□□□□□ -1.7
BRCA1-203ENST00000357654 ATOX1O00244 68 aa4.4□□□□□ -1.7
BRCA1-203ENST00000357654 Q8N976 141 aa4.4□□□□□ -1.7
BRCA1-203ENST00000357654 MAP1BP46821 2468 aaKnown RBP4.4□□□□□ -1.7
BRCA1-203ENST00000357654 LYRM9A8MSI8 78 aa4.4□□□□□ -1.7
BRCA1-203ENST00000357654 FHL2Q14192 279 aa4.4□□□□□ -1.7
BRCA1-203ENST00000357654 CSDC2Q9Y534 153 aaKnown RBP4.4□□□□□ -1.7
BRCA1-203ENST00000357654 EP300Q09472 2414 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-203ENST00000357654 Q6ZVH6 145 aa4.4□□□□□ -1.71
BRCA1-203ENST00000357654 FLVCR1-AS1Q8TAF5 88 aa4.4□□□□□ -1.71
BRCA1-203ENST00000357654 POLEQ07864 2286 aa4.4□□□□□ -1.71
BRCA1-203ENST00000357654 MPDZO75970 2070 aa4.4□□□□□ -1.71
BRCA1-203ENST00000357654 TMEM223A0PJW6 202 aa4.4□□□□□ -1.71
BRCA1-203ENST00000357654 PRAC2D3DTV9 90 aa4.4□□□□□ -1.71
BRCA1-203ENST00000357654 QRFPP83859 136 aa4.4□□□□□ -1.71
BRCA1-203ENST00000357654 PIK3CD-AS1Q5SR53 167 aa4.4□□□□□ -1.71
BRCA1-203ENST00000357654 FXYD5Q96DB9 178 aa4.4□□□□□ -1.71
BRCA1-203ENST00000357654 SBSPONQ8IVN8 264 aa4.4□□□□□ -1.71
BRCA1-203ENST00000357654 MSRB1Q9NZV6 116 aa4.4□□□□□ -1.71
BRCA1-203ENST00000357654 TMEM14CQ9P0S9 112 aa4.4□□□□□ -1.71
BRCA1-203ENST00000357654 IGKV2D-30A0A075B6S6 120 aa4.39□□□□□ -1.71
BRCA1-203ENST00000357654 TRBV7-6A0A0J9YX20 115 aa4.39□□□□□ -1.71
BRCA1-203ENST00000357654 IGKV2-30P06310 120 aa4.39□□□□□ -1.71
BRCA1-203ENST00000357654 LINC00474Q9P2X8 69 aa4.39□□□□□ -1.71
BRCA1-203ENST00000357654 UNQ9165/PRO28630Q6UXU0 137 aa4.39□□□□□ -1.71
BRCA1-203ENST00000357654 PIP4P1Q86T03 277 aa4.39□□□□□ -1.71
BRCA1-203ENST00000357654 SPACA4Q8TDM5 124 aa4.39□□□□□ -1.71
BRCA1-203ENST00000357654 CABIN1Q9Y6J0 2220 aa4.39□□□□□ -1.71
BRCA1-203ENST00000357654 C7orf65Q6ZTY9 151 aa4.39□□□□□ -1.71
BRCA1-203ENST00000357654 IL15RAQ13261 267 aa4.39□□□□□ -1.71
BRCA1-203ENST00000357654 MYO5AQ9Y4I1 1855 aaKnown RBP4.38□□□□□ -1.71
BRCA1-203ENST00000357654 C2orf48Q96LS8 159 aa4.38□□□□□ -1.71
BRCA1-203ENST00000357654 COX8AP10176 69 aa4.38□□□□□ -1.71
BRCA1-203ENST00000357654 DEFB116Q30KQ4 102 aa4.38□□□□□ -1.71
BRCA1-203ENST00000357654 Q6ZSR3 168 aa4.38□□□□□ -1.71
BRCA1-203ENST00000357654 FOXL2NBQ6ZUU3 175 aa4.38□□□□□ -1.71
BRCA1-203ENST00000357654 C20orf197Q8N268 126 aa4.38□□□□□ -1.71
BRCA1-203ENST00000357654 SMIM20Q8N5G0 67 aa4.38□□□□□ -1.71
BRCA1-203ENST00000357654 V9GYV3 84 aa4.38□□□□□ -1.71
BRCA1-203ENST00000357654 LRRK1Q38SD2 2015 aa4.38□□□□□ -1.71
BRCA1-203ENST00000357654 SCN4AP35499 1836 aa4.38□□□□□ -1.71
BRCA1-203ENST00000357654 PLA2G2CQ5R387 149 aa4.38□□□□□ -1.71
BRCA1-203ENST00000357654 KIAA2026Q5HYC2 2103 aa4.38□□□□□ -1.71
BRCA1-203ENST00000357654 K7EP13 123 aa4.38□□□□□ -1.71
BRCA1-203ENST00000357654 LST1O00453 97 aa4.38□□□□□ -1.71
BRCA1-203ENST00000357654 PATE2Q6UY27 113 aa4.38□□□□□ -1.71
BRCA1-203ENST00000357654 KIF26BQ2KJY2 2108 aa4.37□□□□□ -1.71
BRCA1-203ENST00000357654 A0A0G2JMZ2 1700 aa4.37□□□□□ -1.71
BRCA1-203ENST00000357654 ACYP2P14621 99 aa4.37□□□□□ -1.71
BRCA1-203ENST00000357654 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.37□□□□□ -1.713e-7■■■■■ 41.1
BRCA1-203ENST00000357654 COL4A4P53420 1690 aaPredicted RBP4.37□□□□□ -1.71
BRCA1-203ENST00000357654 COL11A1P12107 1806 aaPredicted RBP4.37□□□□□ -1.71
BRCA1-203ENST00000357654 K7EMT4 169 aa4.37□□□□□ -1.71
BRCA1-203ENST00000357654 PRORYQ9H606 182 aa4.37□□□□□ -1.71
BRCA1-203ENST00000357654 POLR3KQ9Y2Y1 108 aaPredicted RBP4.37□□□□□ -1.71
BRCA1-203ENST00000357654 FNDC10F2Z333 226 aa4.37□□□□□ -1.71
BRCA1-203ENST00000357654 CELA1Q9UNI1 258 aa4.37□□□□□ -1.71
BRCA1-203ENST00000357654 ZNF407Q9C0G0 2248 aa4.37□□□□□ -1.71
BRCA1-203ENST00000357654 UTRNP46939 3433 aa4.37□□□□□ -1.71
BRCA1-203ENST00000357654 FAM240AA0A1B0GVK7 77 aa4.37□□□□□ -1.71
BRCA1-203ENST00000357654 NDUFV3P56181 108 aaKnown RBP4.37□□□□□ -1.71
BRCA1-203ENST00000357654 C18orf65Q6ZTR6 163 aa4.37□□□□□ -1.71
BRCA1-203ENST00000357654 TRBV27A0A0K0K1C4 114 aa4.36□□□□□ -1.71
BRCA1-203ENST00000357654 G3V4G9 280 aa4.36□□□□□ -1.71
BRCA1-203ENST00000357654 PROK1P58294 105 aa4.36□□□□□ -1.71
BRCA1-203ENST00000357654 Q6YL49 198 aa4.36□□□□□ -1.71
BRCA1-203ENST00000357654 LINC00467Q9BRT7 94 aa4.36□□□□□ -1.71
BRCA1-203ENST00000357654 GBF1Q92538 1859 aa4.36□□□□□ -1.71
BRCA1-203ENST00000357654 J3KT08 172 aa4.36□□□□□ -1.71
BRCA1-203ENST00000357654 LINC00311Q8N616 119 aa4.36□□□□□ -1.71
BRCA1-203ENST00000357654 SPANXDQ9BXN6 97 aa4.36□□□□□ -1.71
BRCA1-203ENST00000357654 COL4A6Q14031 1691 aa4.36□□□□□ -1.71
BRCA1-203ENST00000357654 TRPM7Q96QT4 1865 aa4.36□□□□□ -1.71
BRCA1-203ENST00000357654 PLXNA1Q9UIW2 1896 aa4.36□□□□□ -1.71
BRCA1-203ENST00000357654 COL4A5P29400 1685 aa4.36□□□□□ -1.71
BRCA1-203ENST00000357654 IGLV4-69A0A075B6H9 119 aa4.36□□□□□ -1.71
BRCA1-203ENST00000357654 C10orf99Q6UWK7 81 aa4.36□□□□□ -1.71
BRCA1-203ENST00000357654 SPTBN2O15020 2390 aa4.36□□□□□ -1.71
BRCA1-203ENST00000357654 CRIP2P52943 208 aaPredicted RBP4.36□□□□□ -1.71
BRCA1-203ENST00000357654 C6orf223Q8N319 242 aa4.36□□□□□ -1.71
BRCA1-203ENST00000357654 C16orf90A8MZG2 172 aa4.36□□□□□ -1.71
BRCA1-203ENST00000357654 BEAN1Q3B7T3 259 aa4.36□□□□□ -1.71
BRCA1-203ENST00000357654 CEP250Q9BV73 2442 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms