RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 TTTY13Q9BZ97 58 aa8.16□□□□□ -1.1
FXR1-202ENST00000357559 H0YGX0 51 aa8.16□□□□□ -1.1
FXR1-202ENST00000357559 COX7BP24311 80 aa8.16□□□□□ -1.1
FXR1-202ENST00000357559 DCANP1Q8TF63 244 aa8.15□□□□□ -1.1
FXR1-202ENST00000357559 SMAD5-AS1Q9Y6J3 95 aa8.15□□□□□ -1.1
FXR1-202ENST00000357559 NOTCH4Q99466 2003 aa8.15□□□□□ -1.1
FXR1-202ENST00000357559 SLPIP03973 132 aa8.15□□□□□ -1.1
FXR1-202ENST00000357559 UBE2D1P51668 147 aa8.15□□□□□ -1.1
FXR1-202ENST00000357559 LINC00269Q8N2A0 174 aa8.15□□□□□ -1.1
FXR1-202ENST00000357559 CENPVL3A0A0U1RRI6 287 aa8.15□□□□□ -1.1
FXR1-202ENST00000357559 Q8N9W7 124 aa8.15□□□□□ -1.1
FXR1-202ENST00000357559 IGLV2-18A0A075B6J9 118 aa8.15□□□□□ -1.11
FXR1-202ENST00000357559 C11orf45Q8TAV5 145 aa8.15□□□□□ -1.11
FXR1-202ENST00000357559 BPY2O14599 106 aa8.14□□□□□ -1.11
FXR1-202ENST00000357559 IGHV2-70P01814 119 aa8.14□□□□□ -1.11
FXR1-202ENST00000357559 CTSZQ9UBR2 303 aa8.14□□□□□ -1.11
FXR1-202ENST00000357559 C2orf70A6NJV1 201 aa8.14□□□□□ -1.11
FXR1-202ENST00000357559 NFE4Q86UQ8 179 aa8.14□□□□□ -1.11
FXR1-202ENST00000357559 PPDPFQ9H3Y8 114 aa8.14□□□□□ -1.11
FXR1-202ENST00000357559 FXYD2P54710 66 aa8.14□□□□□ -1.11
FXR1-202ENST00000357559 CRYGDP07320 174 aa8.14□□□□□ -1.11
FXR1-202ENST00000357559 MDFICQ9P1T7 246 aa8.14□□□□□ -1.11
FXR1-202ENST00000357559 TDRG1Q3Y452 100 aa8.14□□□□□ -1.11
FXR1-202ENST00000357559 PRAC2D3DTV9 90 aa8.13□□□□□ -1.11
FXR1-202ENST00000357559 TAX1BP3O14907 124 aa8.13□□□□□ -1.11
FXR1-202ENST00000357559 PCNX3Q9H6A9 2034 aa8.13□□□□□ -1.11
FXR1-202ENST00000357559 C3orf84H3BNL1 204 aa8.13□□□□□ -1.11
FXR1-202ENST00000357559 TANC1Q9C0D5 1861 aa8.13□□□□□ -1.11
FXR1-202ENST00000357559 PTH2Q96A98 100 aa8.13□□□□□ -1.11
FXR1-202ENST00000357559 MRPL55Q7Z7F7 128 aaKnown RBP8.12□□□□□ -1.11
FXR1-202ENST00000357559 PRRC2AP48634 2157 aaKnown RBP8.12□□□□□ -1.11
FXR1-202ENST00000357559 H3BUA1 57 aa8.12□□□□□ -1.11
FXR1-202ENST00000357559 IGHV7-81A0A0B4J1V7 117 aa8.12□□□□□ -1.11
FXR1-202ENST00000357559 PRR4Q16378 134 aa8.12□□□□□ -1.11
FXR1-202ENST00000357559 NUP210LQ5VU65 1888 aa8.12□□□□□ -1.11
FXR1-202ENST00000357559 UBE2D3P61077 147 aa8.12□□□□□ -1.11
FXR1-202ENST00000357559 SORL1Q92673 2214 aa8.12□□□□□ -1.11
FXR1-202ENST00000357559 LINC00311Q8N616 119 aa8.11□□□□□ -1.11
FXR1-202ENST00000357559 FAM215AQ9Y5M1 114 aa8.11□□□□□ -1.11
FXR1-202ENST00000357559 X6R8D5 127 aa8.11□□□□□ -1.11
FXR1-202ENST00000357559 LOXL1Q08397 574 aaPredicted RBP8.11□□□□□ -1.11
FXR1-202ENST00000357559 Q6ZUT4 128 aa8.11□□□□□ -1.11
FXR1-202ENST00000357559 TEN1Q86WV5 123 aa8.11□□□□□ -1.11
FXR1-202ENST00000357559 C5orf56Q8N8D9 126 aa8.11□□□□□ -1.11
FXR1-202ENST00000357559 PROK2Q9HC23 129 aa8.11□□□□□ -1.11
FXR1-202ENST00000357559 RNF152Q8N8N0 203 aa8.11□□□□□ -1.11
FXR1-202ENST00000357559 TP53TG3Q9ULZ0 132 aa8.11□□□□□ -1.11
FXR1-202ENST00000357559 JMJD7-PLA2G4BH0Y9G9 81 aa8.1□□□□□ -1.11
FXR1-202ENST00000357559 ENHOQ6UWT2 76 aa8.1□□□□□ -1.11
FXR1-202ENST00000357559 PRR15LQ9BU68 103 aa8.1□□□□□ -1.11
FXR1-202ENST00000357559 IGLV9-49A0A0B4J1Y8 123 aa8.1□□□□□ -1.11
FXR1-202ENST00000357559 LY6G6EA0A0G2JKS1 128 aa8.1□□□□□ -1.11
FXR1-202ENST00000357559 NDUFV3P56181 108 aaKnown RBP8.1□□□□□ -1.11
FXR1-202ENST00000357559 RETNLBQ9BQ08 111 aa8.1□□□□□ -1.11
FXR1-202ENST00000357559 H3BQ85 93 aa8.1□□□□□ -1.11
FXR1-202ENST00000357559 C4orf3Q8WVX3 66 aa8.1□□□□□ -1.11
FXR1-202ENST00000357559 TOMM6Q96B49 74 aa8.1□□□□□ -1.11
FXR1-202ENST00000357559 PIK3CD-AS1Q5SR53 167 aa8.1□□□□□ -1.11
FXR1-202ENST00000357559 FOXL2NBQ6ZUU3 175 aa8.1□□□□□ -1.11
FXR1-202ENST00000357559 C16orf54Q6UWD8 224 aa8.1□□□□□ -1.11
FXR1-202ENST00000357559 C1orf158Q8N1D5 194 aa8.1□□□□□ -1.11
FXR1-202ENST00000357559 IGKV2-28A0A075B6P5 120 aa8.09□□□□□ -1.11
FXR1-202ENST00000357559 IGKV2D-28P01615 120 aa8.09□□□□□ -1.11
FXR1-202ENST00000357559 SNURFQ9Y675 71 aa8.09□□□□□ -1.11
FXR1-202ENST00000357559 C17orf82Q86X59 251 aaPredicted RBP8.09□□□□□ -1.11
FXR1-202ENST00000357559 RAI1Q7Z5J4 1906 aaPredicted RBP8.09□□□□□ -1.11
FXR1-202ENST00000357559 CACNA1HO95180 2353 aa8.08□□□□□ -1.12
FXR1-202ENST00000357559 NUPR1O60356 82 aa8.08□□□□□ -1.12
FXR1-202ENST00000357559 C20orf197Q8N268 126 aa8.08□□□□□ -1.12
FXR1-202ENST00000357559 A6NED7 52 aa8.08□□□□□ -1.12
FXR1-202ENST00000357559 SPANXCQ9NY87 97 aa8.08□□□□□ -1.12
FXR1-202ENST00000357559 C11orf86A6NJI1 115 aa8.08□□□□□ -1.12
FXR1-202ENST00000357559 ZNF524Q96C55 264 aa8.08□□□□□ -1.12
FXR1-202ENST00000357559 IGLV1-44P01699 117 aa8.08□□□□□ -1.12
FXR1-202ENST00000357559 C9orf85Q96MD7 179 aa8.08□□□□□ -1.12
FXR1-202ENST00000357559 REG3AQ06141 175 aa8.07□□□□□ -1.12
FXR1-202ENST00000357559 LTBP1Q14766 1721 aa8.07□□□□□ -1.12
FXR1-202ENST00000357559 Q8NFD4 153 aa8.07□□□□□ -1.12
FXR1-202ENST00000357559 I3L2K1 104 aa8.07□□□□□ -1.12
FXR1-202ENST00000357559 RIF1Q5UIP0 2472 aaKnown RBP8.07□□□□□ -1.12
FXR1-202ENST00000357559 G3V4G9 280 aa8.06□□□□□ -1.12
FXR1-202ENST00000357559 K7EIM0 57 aa8.06□□□□□ -1.12
FXR1-202ENST00000357559 FHL1Q13642 323 aa8.06□□□□□ -1.12
FXR1-202ENST00000357559 IGF2-ASQ6U949 168 aa8.06□□□□□ -1.12
FXR1-202ENST00000357559 TCL1BO95988 128 aa8.06□□□□□ -1.12
FXR1-202ENST00000357559 POM121L12Q8N7R1 296 aa8.06□□□□□ -1.12
FXR1-202ENST00000357559 SERP1Q9Y6X1 66 aa8.06□□□□□ -1.12
FXR1-202ENST00000357559 FAM30AQ9NZY2 134 aa8.06□□□□□ -1.12
FXR1-202ENST00000357559 LY6G6CO95867 125 aa8.06□□□□□ -1.12
FXR1-202ENST00000357559 IGFL3Q6UXB1 125 aa8.06□□□□□ -1.12
FXR1-202ENST00000357559 WT1P19544 449 aaPredicted RBP8.06□□□□□ -1.12
FXR1-202ENST00000357559 CXCL5P42830 114 aa8.06□□□□□ -1.12
FXR1-202ENST00000357559 LINC01545Q5VT33 79 aa8.06□□□□□ -1.12
FXR1-202ENST00000357559 XAGE1AQ9HD64 81 aa8.06□□□□□ -1.12
FXR1-202ENST00000357559 DNAJC9-AS1A6NH13 148 aa8.05□□□□□ -1.12
FXR1-202ENST00000357559 C14orf177Q52M58 125 aa8.05□□□□□ -1.12
FXR1-202ENST00000357559 UNQ9165/PRO28630Q6UXU0 137 aa8.05□□□□□ -1.12
FXR1-202ENST00000357559 ZFAND3Q9H8U3 227 aa8.05□□□□□ -1.12
FXR1-202ENST00000357559 KIR2DL5BA0A0G2JN68 375 aa8.05□□□□□ -1.12
FXR1-202ENST00000357559 KIR2DL5BA0A0G2JPC4 375 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms