RNA–Protein interactions for RNA: ENST00000357482.5

USP6-202, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 1 (best)

Gene USP6, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-202ENST00000357482 H7C423 109 aa11.17□□□□□ -0.62
USP6-202ENST00000357482 MSMBP08118 114 aa11.17□□□□□ -0.62
USP6-202ENST00000357482 ELANEP08246 267 aa11.17□□□□□ -0.62
USP6-202ENST00000357482 SPATA3Q8NHX4 192 aa11.17□□□□□ -0.62
USP6-202ENST00000357482 SHANK2-AS3Q9BTD1 123 aa11.17□□□□□ -0.62
USP6-202ENST00000357482 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.17□□□□□ -0.62
USP6-202ENST00000357482 DYSFO75923 2080 aa11.17□□□□□ -0.62
USP6-202ENST00000357482 PSMB8P28062 276 aa11.17□□□□□ -0.62
USP6-202ENST00000357482 SIGLEC15Q6ZMC9 328 aa11.17□□□□□ -0.62
USP6-202ENST00000357482 CD177Q8N6Q3 437 aa11.17□□□□□ -0.62
USP6-202ENST00000357482 TOMM6Q96B49 74 aa11.17□□□□□ -0.62
USP6-202ENST00000357482 SCGB3A1Q96QR1 104 aa11.17□□□□□ -0.62
USP6-202ENST00000357482 LHBP01229 141 aa11.16□□□□□ -0.62
USP6-202ENST00000357482 LMO4P61968 165 aa11.16□□□□□ -0.62
USP6-202ENST00000357482 TRBV19A0A075B6N1 114 aa11.15□□□□□ -0.62
USP6-202ENST00000357482 IGKV1D-17A0A075B6S4 117 aa11.15□□□□□ -0.62
USP6-202ENST00000357482 TMEM30BQ3MIR4 351 aa11.15□□□□□ -0.62
USP6-202ENST00000357482 SERP2Q8N6R1 65 aa11.15□□□□□ -0.62
USP6-202ENST00000357482 PEMTQ9UBM1 199 aa11.15□□□□□ -0.62
USP6-202ENST00000357482 COL6A5A8TX70 2615 aa11.15□□□□□ -0.62
USP6-202ENST00000357482 PFN2P35080 140 aa11.15□□□□□ -0.62
USP6-202ENST00000357482 ANK3Q12955 4377 aaKnown RBP11.15□□□□□ -0.62
USP6-202ENST00000357482 Q1RN00 199 aa11.15□□□□□ -0.62
USP6-202ENST00000357482 PVRIGQ6DKI7 326 aa11.15□□□□□ -0.62
USP6-202ENST00000357482 EXOC3-AS1Q8N2X6 119 aa11.15□□□□□ -0.62
USP6-202ENST00000357482 TMEM86BQ8N661 226 aa11.15□□□□□ -0.62
USP6-202ENST00000357482 FAM19A4Q96LR4 140 aa11.15□□□□□ -0.62
USP6-202ENST00000357482 RNF7Q9UBF6 113 aa11.15□□□□□ -0.62
USP6-202ENST00000357482 FBN1P35555 2871 aaKnown RBP11.14□□□□□ -0.63
USP6-202ENST00000357482 FAM201AQ5SY85 155 aa11.14□□□□□ -0.63
USP6-202ENST00000357482 C9orf85Q96MD7 179 aa11.14□□□□□ -0.63
USP6-202ENST00000357482 KRTAP24-1Q3LI83 254 aa11.13□□□□□ -0.63
USP6-202ENST00000357482 MXRA5Q9NR99 2828 aa11.13□□□□□ -0.63
USP6-202ENST00000357482 J3QQQ9 107 aa11.13□□□□□ -0.63
USP6-202ENST00000357482 NDUFC2O95298 119 aa11.13□□□□□ -0.63
USP6-202ENST00000357482 OXTP01178 125 aa11.13□□□□□ -0.63
USP6-202ENST00000357482 SAA2P0DJI9 122 aaPredicted RBP11.13□□□□□ -0.63
USP6-202ENST00000357482 RPL18AQ02543 176 aaKnown RBP11.13□□□□□ -0.63
USP6-202ENST00000357482 ZNF22P17026 224 aaPredicted RBP11.12□□□□□ -0.63
USP6-202ENST00000357482 RPL35AP18077 110 aaKnown RBP11.12□□□□□ -0.63
USP6-202ENST00000357482 ERCC8Q13216 396 aa11.12□□□□□ -0.63
USP6-202ENST00000357482 PDE6HQ13956 83 aa11.12□□□□□ -0.63
USP6-202ENST00000357482 UPK3BQ9BT76 320 aa11.12□□□□□ -0.63
USP6-202ENST00000357482 DPH3P1Q9H4G8 78 aa11.12□□□□□ -0.63
USP6-202ENST00000357482 LY6LH3BQJ8 138 aa11.11□□□□□ -0.63
USP6-202ENST00000357482 NRACQ8N912 160 aa11.11□□□□□ -0.63
USP6-202ENST00000357482 DSCAML1Q8TD84 2053 aa11.11□□□□□ -0.63
USP6-202ENST00000357482 CUBNO60494 3623 aa11.1□□□□□ -0.63
USP6-202ENST00000357482 EPM2AB3EWF7 344 aa11.1□□□□□ -0.63
USP6-202ENST00000357482 SAA1P0DJI8 122 aaPredicted RBP11.1□□□□□ -0.63
USP6-202ENST00000357482 TMEM167AQ8TBQ9 72 aa11.1□□□□□ -0.63
USP6-202ENST00000357482 C8orf49Q96NF6 230 aa11.1□□□□□ -0.63
USP6-202ENST00000357482 TMEM223A0PJW6 202 aa11.09□□□□□ -0.63
USP6-202ENST00000357482 C11orf86A6NJI1 115 aa11.09□□□□□ -0.63
USP6-202ENST00000357482 H3BTX0 84 aa11.09□□□□□ -0.63
USP6-202ENST00000357482 LST1O00453 97 aa11.09□□□□□ -0.63
USP6-202ENST00000357482 ZNRF1Q8ND25 227 aa11.09□□□□□ -0.63
USP6-202ENST00000357482 DEFB108BQ8NET1 73 aa11.09□□□□□ -0.63
USP6-202ENST00000357482 DSCR8Q96T75 97 aa11.09□□□□□ -0.63
USP6-202ENST00000357482 EGR2P11161 476 aaPredicted RBP11.09□□□□□ -0.63
USP6-202ENST00000357482 DAND5Q8N907 189 aa11.09□□□□□ -0.63
USP6-202ENST00000357482 KLHL30-AS1Q8NEE0 82 aa11.09□□□□□ -0.63
USP6-202ENST00000357482 GAFA1Q96PS6 74 aa11.09□□□□□ -0.63
USP6-202ENST00000357482 DCTN5Q9BTE1 182 aa11.09□□□□□ -0.63
USP6-202ENST00000357482 SMIM2Q9BVW6 85 aa11.09□□□□□ -0.63
USP6-202ENST00000357482 TRAV12-2A0A075B6T6 113 aa11.08□□□□□ -0.64
USP6-202ENST00000357482 TRIAP1O43715 76 aa11.08□□□□□ -0.64
USP6-202ENST00000357482 C1orf229Q6ZS94 237 aaPredicted RBP11.08□□□□□ -0.64
USP6-202ENST00000357482 LINC00336Q6ZUF6 198 aa11.08□□□□□ -0.64
USP6-202ENST00000357482 FAM216BQ8N7L0 139 aa11.08□□□□□ -0.64
USP6-202ENST00000357482 C20orf173Q96LM9 149 aa11.08□□□□□ -0.64
USP6-202ENST00000357482 RPUSD1Q9UJJ7 312 aaKnown RBP11.08□□□□□ -0.64
USP6-202ENST00000357482 TMEM178BH3BS89 294 aa11.07□□□□□ -0.64
USP6-202ENST00000357482 AVPP01185 164 aa11.07□□□□□ -0.64
USP6-202ENST00000357482 CGB3P0DN86 165 aa11.07□□□□□ -0.64
USP6-202ENST00000357482 CGB7P0DN87 165 aa11.07□□□□□ -0.64
USP6-202ENST00000357482 NPC2P61916 151 aa11.07□□□□□ -0.64
USP6-202ENST00000357482 C1orf195Q5TG92 126 aa11.07□□□□□ -0.64
USP6-202ENST00000357482 CCL13Q99616 98 aa11.07□□□□□ -0.64
USP6-202ENST00000357482 IGHV1-69DA0A0B4J2H0 117 aa11.07□□□□□ -0.64
USP6-202ENST00000357482 A0A0J9YX75 114 aa11.07□□□□□ -0.64
USP6-202ENST00000357482 LGALS3P17931 250 aaKnown RBP11.07□□□□□ -0.64
USP6-202ENST00000357482 WT1-ASQ06250 92 aa11.07□□□□□ -0.64
USP6-202ENST00000357482 TMEM200BQ69YZ2 307 aa11.07□□□□□ -0.64
USP6-202ENST00000357482 Q6ZS46 218 aa11.07□□□□□ -0.64
USP6-202ENST00000357482 DCANP1Q8TF63 244 aa11.07□□□□□ -0.64
USP6-202ENST00000357482 ICOSQ9Y6W8 199 aa11.07□□□□□ -0.64
USP6-202ENST00000357482 SERP1Q9Y6X1 66 aa11.07□□□□□ -0.64
USP6-202ENST00000357482 SVEP1Q4LDE5 3571 aa11.06□□□□□ -0.64
USP6-202ENST00000357482 TRAV41A0A0B4J266 112 aa11.06□□□□□ -0.64
USP6-202ENST00000357482 GAS8-AS1O95177 125 aa11.06□□□□□ -0.64
USP6-202ENST00000357482 ZFP36P26651 326 aaKnown RBP11.06□□□□□ -0.64
USP6-202ENST00000357482 MRPL36Q9P0J6 103 aaKnown RBP11.06□□□□□ -0.64
USP6-202ENST00000357482 STAB1Q9NY15 2570 aa11.06□□□□□ -0.64
USP6-202ENST00000357482 TRBV7-1A0A0A6YYK4 115 aa11.05□□□□□ -0.64
USP6-202ENST00000357482 COPS9Q8WXC6 57 aa11.05□□□□□ -0.64
USP6-202ENST00000357482 RNF125Q96EQ8 232 aa11.05□□□□□ -0.64
USP6-202ENST00000357482 SDHAF1A6NFY7 115 aa11.05□□□□□ -0.64
USP6-202ENST00000357482 GATA1P15976 413 aaPredicted RBP11.05□□□□□ -0.64
USP6-202ENST00000357482 MSRB1Q9NZV6 116 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms