RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 PQLC2Q6ZP29 291 aa8.02□□□□□ -1.13
RTN3-204ENST00000354497 TRPT1Q86TN4 253 aaKnown RBP8.02□□□□□ -1.13
RTN3-204ENST00000354497 ZNRF2Q8NHG8 242 aa8.02□□□□□ -1.13
RTN3-204ENST00000354497 KRTAP4-6Q9BYQ5 205 aa8.02□□□□□ -1.13
RTN3-204ENST00000354497 F11RQ9Y624 299 aaKnown RBP8.02□□□□□ -1.13
RTN3-204ENST00000354497 TEX50A0A1B0GTY4 177 aa8.01□□□□□ -1.13
RTN3-204ENST00000354497 K7EIM0 57 aa8.01□□□□□ -1.13
RTN3-204ENST00000354497 K7EN84 100 aa8.01□□□□□ -1.13
RTN3-204ENST00000354497 SCGB2A1O75556 95 aa8.01□□□□□ -1.13
RTN3-204ENST00000354497 CTSGP08311 255 aa8.01□□□□□ -1.13
RTN3-204ENST00000354497 IFITM1P13164 125 aa8.01□□□□□ -1.13
RTN3-204ENST00000354497 HTN3P15516 51 aa8.01□□□□□ -1.13
RTN3-204ENST00000354497 EMP1P54849 157 aa8.01□□□□□ -1.13
RTN3-204ENST00000354497 ARL16Q0P5N6 197 aa8.01□□□□□ -1.13
RTN3-204ENST00000354497 EIF4EBP1Q13541 118 aaPredicted RBP8.01□□□□□ -1.13
RTN3-204ENST00000354497 TBC1D26Q86UD7 250 aa8.01□□□□□ -1.13
RTN3-204ENST00000354497 OR13C6PQ8NH95 151 aa8.01□□□□□ -1.13
RTN3-204ENST00000354497 LINC01600Q96MT4 127 aa8.01□□□□□ -1.13
RTN3-204ENST00000354497 PPDPFQ9H3Y8 114 aa8.01□□□□□ -1.13
RTN3-204ENST00000354497 SLC25A22Q9H936 323 aa8.01□□□□□ -1.13
RTN3-204ENST00000354497 A0A1B0GWB2 263 aa8□□□□□ -1.13
RTN3-204ENST00000354497 APOMO95445 188 aa8□□□□□ -1.13
RTN3-204ENST00000354497 APOHP02749 345 aaPredicted RBP8□□□□□ -1.13
RTN3-204ENST00000354497 URB1-AS1Q96HZ7 61 aa8□□□□□ -1.13
RTN3-204ENST00000354497 ZNF414Q96IQ9 312 aa8□□□□□ -1.13
RTN3-204ENST00000354497 C20orf78Q9BR46 151 aa8□□□□□ -1.13
RTN3-204ENST00000354497 CCL28Q9NRJ3 127 aa8□□□□□ -1.13
RTN3-204ENST00000354497 IGHV3-48P01763 117 aa7.99□□□□□ -1.13
RTN3-204ENST00000354497 SLC25A5P05141 298 aaKnown RBP7.99□□□□□ -1.13
RTN3-204ENST00000354497 ZNF688P0C7X2 276 aa7.99□□□□□ -1.13
RTN3-204ENST00000354497 GCSHP23434 173 aa7.99□□□□□ -1.13
RTN3-204ENST00000354497 ATP5G3P48201 142 aa7.99□□□□□ -1.13
RTN3-204ENST00000354497 MFAP4P55083 255 aa7.99□□□□□ -1.13
RTN3-204ENST00000354497 GAGE2BQ13066 116 aa7.99□□□□□ -1.13
RTN3-204ENST00000354497 TIGITQ495A1 244 aa7.99□□□□□ -1.13
RTN3-204ENST00000354497 GAGE2EQ4V326 116 aa7.99□□□□□ -1.13
RTN3-204ENST00000354497 OR1L8Q8NGR8 309 aa7.99□□□□□ -1.13
RTN3-204ENST00000354497 OR51H1Q8NH63 302 aa7.99□□□□□ -1.13
RTN3-204ENST00000354497 PRELID3AQ96N28 172 aa7.99□□□□□ -1.13
RTN3-204ENST00000354497 GAGE2DQ9UEU5 116 aa7.99□□□□□ -1.13
RTN3-204ENST00000354497 A0A1B0GXF2 115 aa7.98□□□□□ -1.13
RTN3-204ENST00000354497 J3KT08 172 aa7.98□□□□□ -1.13
RTN3-204ENST00000354497 ERVK-16P61578 105 aa7.98□□□□□ -1.13
RTN3-204ENST00000354497 OR10J6PQ8NGY7 276 aa7.98□□□□□ -1.13
RTN3-204ENST00000354497 NPCDR1Q9BY65 106 aa7.98□□□□□ -1.13
RTN3-204ENST00000354497 TRAV2A0A0B4J234 112 aa7.97□□□□□ -1.13
RTN3-204ENST00000354497 PMS2P5A8MQ11 134 aa7.97□□□□□ -1.13
RTN3-204ENST00000354497 SPART-AS1P0CW21 52 aa7.97□□□□□ -1.13
RTN3-204ENST00000354497 TTC32Q5I0X7 151 aa7.97□□□□□ -1.13
RTN3-204ENST00000354497 LYRM7Q5U5X0 104 aa7.97□□□□□ -1.13
RTN3-204ENST00000354497 CFAP126Q5VTH2 177 aa7.97□□□□□ -1.13
RTN3-204ENST00000354497 RNASEKQ6P5S7 137 aaKnown RBP7.97□□□□□ -1.13
RTN3-204ENST00000354497 CSNK1G2-AS1Q8NCQ2 148 aa7.97□□□□□ -1.13
RTN3-204ENST00000354497 NUP35Q8NFH5 326 aa7.97□□□□□ -1.13
RTN3-204ENST00000354497 XCL2Q9UBD3 114 aa7.97□□□□□ -1.13
RTN3-204ENST00000354497 WDR83OSQ9Y284 106 aa7.97□□□□□ -1.13
RTN3-204ENST00000354497 GGTLC3B5MD39 225 aa7.96□□□□□ -1.13
RTN3-204ENST00000354497 INAFM2P0DMQ5 153 aa7.96□□□□□ -1.13
RTN3-204ENST00000354497 FXYD4P59646 89 aa7.96□□□□□ -1.13
RTN3-204ENST00000354497 TEN1Q86WV5 123 aa7.96□□□□□ -1.13
RTN3-204ENST00000354497 C6orf223Q8N319 242 aa7.96□□□□□ -1.13
RTN3-204ENST00000354497 NDUFA4L2Q9NRX3 87 aa7.96□□□□□ -1.13
RTN3-204ENST00000354497 IGHV3OR16-12A0A075B7B8 117 aa7.95□□□□□ -1.14
RTN3-204ENST00000354497 UBE2L5PA0A1B0GUS4 154 aa7.95□□□□□ -1.14
RTN3-204ENST00000354497 EPM2AB3EWF7 344 aa7.95□□□□□ -1.14
RTN3-204ENST00000354497 K7EQG2 157 aa7.95□□□□□ -1.14
RTN3-204ENST00000354497 CSN1S1P47710 185 aa7.95□□□□□ -1.14
RTN3-204ENST00000354497 CT83Q5H943 113 aa7.95□□□□□ -1.14
RTN3-204ENST00000354497 SH2D6Q7Z4S9 175 aa7.95□□□□□ -1.14
RTN3-204ENST00000354497 Q8N3U1 123 aa7.95□□□□□ -1.14
RTN3-204ENST00000354497 GATD1Q8NB37 220 aa7.95□□□□□ -1.14
RTN3-204ENST00000354497 HEYLQ9NQ87 328 aaPredicted RBP7.95□□□□□ -1.14
RTN3-204ENST00000354497 SCO2A0A1W2PP80 73 aa7.95□□□□□ -1.14
RTN3-204ENST00000354497 CCDC179H3BU77 68 aa7.95□□□□□ -1.14
RTN3-204ENST00000354497 PGLYRP1O75594 196 aaPredicted RBP7.95□□□□□ -1.14
RTN3-204ENST00000354497 RRN3P1Q2M238 152 aa7.95□□□□□ -1.14
RTN3-204ENST00000354497 IBA57Q5T440 356 aaKnown RBP7.95□□□□□ -1.14
RTN3-204ENST00000354497 RASL10AQ92737 203 aa7.95□□□□□ -1.14
RTN3-204ENST00000354497 ZC2HC1AQ96GY0 325 aa7.95□□□□□ -1.14
RTN3-204ENST00000354497 LINC00479Q96M42 142 aa7.95□□□□□ -1.14
RTN3-204ENST00000354497 I3L2K1 104 aa7.94□□□□□ -1.14
RTN3-204ENST00000354497 ORM2P19652 201 aa7.94□□□□□ -1.14
RTN3-204ENST00000354497 TMEM167BQ9NRX6 74 aa7.94□□□□□ -1.14
RTN3-204ENST00000354497 NBDYA0A0U1RRE5 68 aa7.93□□□□□ -1.14
RTN3-204ENST00000354497 ORM1P02763 201 aa7.93□□□□□ -1.14
RTN3-204ENST00000354497 ATP5G1P05496 136 aa7.93□□□□□ -1.14
RTN3-204ENST00000354497 FXYD7P58549 80 aa7.93□□□□□ -1.14
RTN3-204ENST00000354497 MEIG1Q5JSS6 88 aa7.93□□□□□ -1.14
RTN3-204ENST00000354497 FAM222AQ5U5X8 452 aa7.93□□□□□ -1.14
RTN3-204ENST00000354497 ZNF818PQ6ZRF7 136 aa7.93□□□□□ -1.14
RTN3-204ENST00000354497 RAB37Q96AX2 223 aa7.93□□□□□ -1.14
RTN3-204ENST00000354497 LINC01587Q99440 93 aa7.93□□□□□ -1.14
RTN3-204ENST00000354497 GFRA4Q9GZZ7 299 aa7.93□□□□□ -1.14
RTN3-204ENST00000354497 PRNDQ9UKY0 176 aa7.93□□□□□ -1.14
RTN3-204ENST00000354497 GCHFRP30047 84 aa7.92□□□□□ -1.14
RTN3-204ENST00000354497 AMTNQ6UX39 209 aa7.92□□□□□ -1.14
RTN3-204ENST00000354497 CEND1Q8N111 149 aa7.92□□□□□ -1.14
RTN3-204ENST00000354497 METTL26Q96S19 204 aa7.92□□□□□ -1.14
RTN3-204ENST00000354497 SLC25A2Q9BXI2 301 aa7.92□□□□□ -1.14
RTN3-204ENST00000354497 IMUPQ9GZP8 106 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms