RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 FAM222AQ5U5X8 452 aa8.56□□□□□ -1.04
SLC6A20-201ENST00000353278 LINC01548A6NM66 108 aa8.56□□□□□ -1.04
SLC6A20-201ENST00000353278 TLN1Q9Y490 2541 aaKnown RBP8.55□□□□□ -1.04
SLC6A20-201ENST00000353278 CHD3Q12873 2000 aaKnown RBP8.55□□□□□ -1.04
SLC6A20-201ENST00000353278 TRAV26-1A0A087WT03 109 aa8.55□□□□□ -1.04
SLC6A20-201ENST00000353278 ZNF747Q9BV97 191 aa8.55□□□□□ -1.04
SLC6A20-201ENST00000353278 PROP1O75360 226 aa8.55□□□□□ -1.04
SLC6A20-201ENST00000353278 SND1-IT1Q9HBX3 110 aa8.55□□□□□ -1.04
SLC6A20-201ENST00000353278 PRRC2AP48634 2157 aaKnown RBP8.55□□□□□ -1.04
SLC6A20-201ENST00000353278 UBE2V1Q13404 147 aa8.54□□□□□ -1.04
SLC6A20-201ENST00000353278 IGLC2P0DOY2 106 aa8.54□□□□□ -1.04
SLC6A20-201ENST00000353278 ORMDL1Q9P0S3 153 aa8.54□□□□□ -1.04
SLC6A20-201ENST00000353278 CARD19Q96LW7 228 aa8.54□□□□□ -1.04
SLC6A20-201ENST00000353278 MDFICQ9P1T7 246 aa8.54□□□□□ -1.04
SLC6A20-201ENST00000353278 K7EQG2 157 aa8.54□□□□□ -1.04
SLC6A20-201ENST00000353278 MIFP14174 115 aa8.54□□□□□ -1.04
SLC6A20-201ENST00000353278 CCL25O15444 150 aa8.53□□□□□ -1.04
SLC6A20-201ENST00000353278 NDUFB1O75438 58 aa8.53□□□□□ -1.04
SLC6A20-201ENST00000353278 CEND1Q8N111 149 aa8.53□□□□□ -1.04
SLC6A20-201ENST00000353278 ODF3Q96PU9 254 aa8.53□□□□□ -1.04
SLC6A20-201ENST00000353278 TINCRA0A1B0GVN0 87 aa8.53□□□□□ -1.04
SLC6A20-201ENST00000353278 EBI3Q14213 229 aa8.53□□□□□ -1.04
SLC6A20-201ENST00000353278 LINC01006Q8NI28 216 aa8.53□□□□□ -1.04
SLC6A20-201ENST00000353278 OPRPNQ99935 248 aaPredicted RBP8.53□□□□□ -1.04
SLC6A20-201ENST00000353278 IGLC3P0DOY3 106 aa8.52□□□□□ -1.04
SLC6A20-201ENST00000353278 LYPD6BQ8NI32 183 aa8.52□□□□□ -1.04
SLC6A20-201ENST00000353278 LINC01545Q5VT33 79 aa8.52□□□□□ -1.05
SLC6A20-201ENST00000353278 H0YGX0 51 aa8.52□□□□□ -1.05
SLC6A20-201ENST00000353278 TRAV12-1A0A0B4J245 112 aa8.51□□□□□ -1.05
SLC6A20-201ENST00000353278 CFC1BP0CG36 223 aa8.51□□□□□ -1.05
SLC6A20-201ENST00000353278 CFC1P0CG37 223 aa8.51□□□□□ -1.05
SLC6A20-201ENST00000353278 Q6ZTI0 123 aa8.51□□□□□ -1.05
SLC6A20-201ENST00000353278 FAM110AQ9BQ89 295 aa8.51□□□□□ -1.05
SLC6A20-201ENST00000353278 C2CD3Q4AC94 2353 aa8.51□□□□□ -1.05
SLC6A20-201ENST00000353278 SIVA1O15304 175 aa8.51□□□□□ -1.05
SLC6A20-201ENST00000353278 PSMG3-AS1Q96PY0 264 aa8.51□□□□□ -1.05
SLC6A20-201ENST00000353278 NCOA6Q14686 2063 aaPredicted RBP8.51□□□□□ -1.05
SLC6A20-201ENST00000353278 PLXNB3Q9ULL4 1909 aa8.51□□□□□ -1.05
SLC6A20-201ENST00000353278 IGKV2-24A0A0C4DH68 120 aa8.51□□□□□ -1.05
SLC6A20-201ENST00000353278 IGLV2-14P01704 120 aa8.51□□□□□ -1.05
SLC6A20-201ENST00000353278 Q6ZVH6 145 aa8.51□□□□□ -1.05
SLC6A20-201ENST00000353278 KMT2EQ8IZD2 1858 aa8.51□□□□□ -1.05
SLC6A20-201ENST00000353278 CTRLP40313 264 aa8.51□□□□□ -1.05
SLC6A20-201ENST00000353278 LINC00482Q8N8I6 264 aa8.51□□□□□ -1.05
SLC6A20-201ENST00000353278 PPDPFLQ8WWR9 84 aa8.51□□□□□ -1.05
SLC6A20-201ENST00000353278 TRAV10A0A0B4J240 114 aa8.5□□□□□ -1.05
SLC6A20-201ENST00000353278 TRBV6-1A0A0K0K1D8 114 aa8.5□□□□□ -1.05
SLC6A20-201ENST00000353278 GAGE12HA6NDE8 117 aa8.5□□□□□ -1.05
SLC6A20-201ENST00000353278 CRYGDP07320 174 aa8.5□□□□□ -1.05
SLC6A20-201ENST00000353278 C9orf118A6NHY6 69 aa8.5□□□□□ -1.05
SLC6A20-201ENST00000353278 RPL39P62891 51 aaKnown RBP8.5□□□□□ -1.05
SLC6A20-201ENST00000353278 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.5□□□□□ -1.05
SLC6A20-201ENST00000353278 ZNF462Q96JM2 2506 aa8.49□□□□□ -1.05
SLC6A20-201ENST00000353278 MED12LQ86YW9 2145 aa8.49□□□□□ -1.05
SLC6A20-201ENST00000353278 H3BQ85 93 aa8.49□□□□□ -1.05
SLC6A20-201ENST00000353278 B9D2Q9BPU9 175 aa8.49□□□□□ -1.05
SLC6A20-201ENST00000353278 GTSF1LQ9H1H1 148 aa8.49□□□□□ -1.05
SLC6A20-201ENST00000353278 BAALC-AS2P0C853 105 aa8.48□□□□□ -1.05
SLC6A20-201ENST00000353278 ZNF702PQ9H963 129 aa8.48□□□□□ -1.05
SLC6A20-201ENST00000353278 COL4A4P53420 1690 aaPredicted RBP8.48□□□□□ -1.05
SLC6A20-201ENST00000353278 C20orf203Q8NBC4 194 aa8.48□□□□□ -1.05
SLC6A20-201ENST00000353278 PLA2G2EQ9NZK7 142 aa8.48□□□□□ -1.05
SLC6A20-201ENST00000353278 COL4A3Q01955 1670 aa8.48□□□□□ -1.05
SLC6A20-201ENST00000353278 DIRC1Q969H9 104 aa8.47□□□□□ -1.05
SLC6A20-201ENST00000353278 PCDH15Q96QU1 1955 aa8.47□□□□□ -1.05
SLC6A20-201ENST00000353278 LRRK2Q5S007 2527 aa8.47□□□□□ -1.05
SLC6A20-201ENST00000353278 IGKV1D-37A0A075B6S9 117 aa8.47□□□□□ -1.05
SLC6A20-201ENST00000353278 REG3AQ06141 175 aa8.47□□□□□ -1.05
SLC6A20-201ENST00000353278 CITED1Q99966 193 aa8.47□□□□□ -1.05
SLC6A20-201ENST00000353278 HIGD2BQ4VC39 106 aa8.47□□□□□ -1.05
SLC6A20-201ENST00000353278 LY6LH3BQJ8 138 aa8.47□□□□□ -1.05
SLC6A20-201ENST00000353278 C12orf74Q32Q52 190 aa8.47□□□□□ -1.05
SLC6A20-201ENST00000353278 NCR3O14931 201 aa8.46□□□□□ -1.05
SLC6A20-201ENST00000353278 ETDBQ3ZM63 59 aa8.46□□□□□ -1.05
SLC6A20-201ENST00000353278 C9orf153Q5TBE3 101 aa8.46□□□□□ -1.05
SLC6A20-201ENST00000353278 GTSF1Q8WW33 167 aa8.46□□□□□ -1.05
SLC6A20-201ENST00000353278 MBD6Q96DN6 1003 aa8.46□□□□□ -1.06
SLC6A20-201ENST00000353278 F8W1H4 67 aa8.46□□□□□ -1.06
SLC6A20-201ENST00000353278 TRACP01848 142 aa8.46□□□□□ -1.06
SLC6A20-201ENST00000353278 LINC00269Q8N2A0 174 aa8.46□□□□□ -1.06
SLC6A20-201ENST00000353278 TOMM6Q96B49 74 aa8.46□□□□□ -1.06
SLC6A20-201ENST00000353278 DENND4AQ7Z401 1863 aa8.45□□□□□ -1.06
SLC6A20-201ENST00000353278 UFSP1Q6NVU6 142 aa8.45□□□□□ -1.06
SLC6A20-201ENST00000353278 C10orf99Q6UWK7 81 aa8.45□□□□□ -1.06
SLC6A20-201ENST00000353278 NFE4Q86UQ8 179 aa8.45□□□□□ -1.06
SLC6A20-201ENST00000353278 PSMB8P28062 276 aa8.45□□□□□ -1.06
SLC6A20-201ENST00000353278 SPANXDQ9BXN6 97 aa8.45□□□□□ -1.06
SLC6A20-201ENST00000353278 IGHV4-28A0A0C4DH34 117 aa8.44□□□□□ -1.06
SLC6A20-201ENST00000353278 P0C879 139 aa8.44□□□□□ -1.06
SLC6A20-201ENST00000353278 MAJINQ3KP22 176 aa8.44□□□□□ -1.06
SLC6A20-201ENST00000353278 CDPF1Q6NVV7 123 aa8.44□□□□□ -1.06
SLC6A20-201ENST00000353278 PCP2Q8IVA1 136 aa8.44□□□□□ -1.06
SLC6A20-201ENST00000353278 K7ERJ3 54 aa8.44□□□□□ -1.06
SLC6A20-201ENST00000353278 ABCA12Q86UK0 2595 aa8.44□□□□□ -1.06
SLC6A20-201ENST00000353278 MUSTN1Q8IVN3 82 aa8.44□□□□□ -1.06
SLC6A20-201ENST00000353278 KIR2DL5BQ8NHK3 375 aa8.44□□□□□ -1.06
SLC6A20-201ENST00000353278 BAALCQ8WXS3 180 aa8.44□□□□□ -1.06
SLC6A20-201ENST00000353278 KIR2DL5BA0A0G2JN68 375 aa8.44□□□□□ -1.06
SLC6A20-201ENST00000353278 KIR2DL5BA0A0G2JPC4 375 aa8.44□□□□□ -1.06
SLC6A20-201ENST00000353278 CRYGBP07316 175 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms