RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 TIMM17AQ99595 171 aa12.18□□□□□ -0.46
PTPN11-201ENST00000351677 HIGD1BQ9P298 99 aa12.18□□□□□ -0.46
PTPN11-201ENST00000351677 TP53TG3Q9ULZ0 132 aa12.18□□□□□ -0.46
PTPN11-201ENST00000351677 HIST2H2BCQ6DN03 193 aa12.18□□□□□ -0.46
PTPN11-201ENST00000351677 COX7B2Q8TF08 81 aa12.18□□□□□ -0.46
PTPN11-201ENST00000351677 PRO3102Q9H379 93 aa12.18□□□□□ -0.46
PTPN11-201ENST00000351677 WFDC2Q14508 124 aa12.18□□□□□ -0.46
PTPN11-201ENST00000351677 ATP5G1P05496 136 aa12.17□□□□□ -0.46
PTPN11-201ENST00000351677 ORMDL1Q9P0S3 153 aa12.17□□□□□ -0.46
PTPN11-201ENST00000351677 SPART-AS1P0CW21 52 aa12.17□□□□□ -0.46
PTPN11-201ENST00000351677 HHLA3Q9XRX5 114 aa12.17□□□□□ -0.46
PTPN11-201ENST00000351677 TMEM89A2RUT3 159 aa12.17□□□□□ -0.46
PTPN11-201ENST00000351677 MRPL23Q16540 153 aaKnown RBP12.17□□□□□ -0.46
PTPN11-201ENST00000351677 MLST8Q9BVC4 326 aa12.17□□□□□ -0.46
PTPN11-201ENST00000351677 COX7A2LO14548 114 aa12.17□□□□□ -0.46
PTPN11-201ENST00000351677 CEMP1Q6PRD7 247 aaPredicted RBP12.17□□□□□ -0.46
PTPN11-201ENST00000351677 C1orf43Q9BWL3 253 aa12.16□□□□□ -0.46
PTPN11-201ENST00000351677 KIAA1549Q9HCM3 1950 aa12.16□□□□□ -0.46
PTPN11-201ENST00000351677 ZMAT4Q9H898 229 aa12.16□□□□□ -0.46
PTPN11-201ENST00000351677 CRYGBP07316 175 aa12.16□□□□□ -0.46
PTPN11-201ENST00000351677 CSPG4Q6UVK1 2322 aa12.16□□□□□ -0.46
PTPN11-201ENST00000351677 P0DMU3 169 aa12.15□□□□□ -0.46
PTPN11-201ENST00000351677 FAM231AP0DMU4 169 aa12.15□□□□□ -0.46
PTPN11-201ENST00000351677 FAM231CP0DMU5 169 aa12.15□□□□□ -0.46
PTPN11-201ENST00000351677 CEP192Q8TEP8 1941 aa12.15□□□□□ -0.46
PTPN11-201ENST00000351677 DEFB135Q30KP9 77 aa12.15□□□□□ -0.47
PTPN11-201ENST00000351677 TNFRSF13BO14836 293 aaPredicted RBP12.14□□□□□ -0.47
PTPN11-201ENST00000351677 IGF1P05019 195 aa12.14□□□□□ -0.47
PTPN11-201ENST00000351677 CAMK2N2Q96S95 79 aa12.14□□□□□ -0.47
PTPN11-201ENST00000351677 RNASE8Q8TDE3 154 aaKnown RBP12.14□□□□□ -0.47
PTPN11-201ENST00000351677 RPL18AQ02543 176 aaKnown RBP12.14□□□□□ -0.47
PTPN11-201ENST00000351677 TANC2Q9HCD6 1990 aa12.14□□□□□ -0.47
PTPN11-201ENST00000351677 MAP6D1Q9H9H5 199 aa12.14□□□□□ -0.47
PTPN11-201ENST00000351677 VSIG2Q96IQ7 327 aa12.13□□□□□ -0.47
PTPN11-201ENST00000351677 C20orf203Q8NBC4 194 aa12.13□□□□□ -0.47
PTPN11-201ENST00000351677 C20orf173Q96LM9 149 aa12.13□□□□□ -0.47
PTPN11-201ENST00000351677 IGLC6P0CF74 106 aa12.13□□□□□ -0.47
PTPN11-201ENST00000351677 LINC01620Q4KN68 170 aa12.12□□□□□ -0.47
PTPN11-201ENST00000351677 DNAJC9-AS1A6NH13 148 aa12.12□□□□□ -0.47
PTPN11-201ENST00000351677 LY6LH3BQJ8 138 aa12.12□□□□□ -0.47
PTPN11-201ENST00000351677 TP73-AS1Q9UF72 201 aa12.12□□□□□ -0.47
PTPN11-201ENST00000351677 OTOGLQ3ZCN5 2332 aa12.12□□□□□ -0.47
PTPN11-201ENST00000351677 MBD6Q96DN6 1003 aa12.12□□□□□ -0.47
PTPN11-201ENST00000351677 MYCNOSP40205 109 aa12.11□□□□□ -0.47
PTPN11-201ENST00000351677 NOTCH2Q04721 2471 aa12.11□□□□□ -0.47
PTPN11-201ENST00000351677 UBE2BP63146 152 aa12.11□□□□□ -0.47
PTPN11-201ENST00000351677 hADV29S1A0JD25 119 aa12.11□□□□□ -0.47
PTPN11-201ENST00000351677 CRIP1P50238 77 aa12.11□□□□□ -0.47
PTPN11-201ENST00000351677 PRORYQ9H606 182 aa12.11□□□□□ -0.47
PTPN11-201ENST00000351677 TNRC6BQ9UPQ9 1833 aaKnown RBP12.11□□□□□ -0.47
PTPN11-201ENST00000351677 CLEC2BQ92478 149 aa12.1□□□□□ -0.47
PTPN11-201ENST00000351677 Q6ZUT4 128 aa12.1□□□□□ -0.47
PTPN11-201ENST00000351677 DSCAML1Q8TD84 2053 aa12.1□□□□□ -0.47
PTPN11-201ENST00000351677 YPEL4Q96NS1 127 aa12.1□□□□□ -0.47
PTPN11-201ENST00000351677 PLXNB1O43157 2135 aa12.1□□□□□ -0.47
PTPN11-201ENST00000351677 IGHV1-58A0A0C4DH39 117 aa12.09□□□□□ -0.47
PTPN11-201ENST00000351677 NCR3O14931 201 aa12.09□□□□□ -0.47
PTPN11-201ENST00000351677 TMEM263Q8WUH6 116 aaKnown RBP12.09□□□□□ -0.47
PTPN11-201ENST00000351677 SMAD5-AS1Q9Y6J3 95 aa12.09□□□□□ -0.47
PTPN11-201ENST00000351677 SPATA12Q7Z6I5 190 aa12.09□□□□□ -0.47
PTPN11-201ENST00000351677 TEN1Q86WV5 123 aa12.09□□□□□ -0.47
PTPN11-201ENST00000351677 TRACP01848 142 aa12.08□□□□□ -0.48
PTPN11-201ENST00000351677 CLPSL1A2RUU4 121 aa12.08□□□□□ -0.48
PTPN11-201ENST00000351677 H0YGX0 51 aa12.08□□□□□ -0.48
PTPN11-201ENST00000351677 ZFAND3Q9H8U3 227 aa12.08□□□□□ -0.48
PTPN11-201ENST00000351677 MIR7-3HGQ8N6C7 128 aa12.07□□□□□ -0.48
PTPN11-201ENST00000351677 NFE4Q86UQ8 179 aa12.07□□□□□ -0.48
PTPN11-201ENST00000351677 LGALS9O00182 355 aa12.07□□□□□ -0.48
PTPN11-201ENST00000351677 WNK1Q9H4A3 2382 aa12.06□□□□□ -0.48
PTPN11-201ENST00000351677 Q6ZTI0 123 aa12.06□□□□□ -0.48
PTPN11-201ENST00000351677 C10orf99Q6UWK7 81 aa12.06□□□□□ -0.48
PTPN11-201ENST00000351677 IGHV4-31P0DP07 118 aa12.06□□□□□ -0.48
PTPN11-201ENST00000351677 C11orf71Q6IPW1 123 aa12.06□□□□□ -0.48
PTPN11-201ENST00000351677 KLK12Q9UKR0 248 aa12.06□□□□□ -0.48
PTPN11-201ENST00000351677 ETDCA0A1B0GVM5 59 aa12.05□□□□□ -0.48
PTPN11-201ENST00000351677 EBI3Q14213 229 aa12.05□□□□□ -0.48
PTPN11-201ENST00000351677 DSCAMO60469 2012 aa12.05□□□□□ -0.48
PTPN11-201ENST00000351677 FSTL3O95633 263 aa12.05□□□□□ -0.48
PTPN11-201ENST00000351677 PTH2Q96A98 100 aa12.05□□□□□ -0.48
PTPN11-201ENST00000351677 K7EQG2 157 aa12.05□□□□□ -0.48
PTPN11-201ENST00000351677 Q6YL49 198 aa12.05□□□□□ -0.48
PTPN11-201ENST00000351677 SPANXDQ9BXN6 97 aa12.05□□□□□ -0.48
PTPN11-201ENST00000351677 C10orf142B7Z368 130 aa12.05□□□□□ -0.48
PTPN11-201ENST00000351677 ACYP1P07311 99 aa12.05□□□□□ -0.48
PTPN11-201ENST00000351677 HIST2H2BDQ6DRA6 164 aa12.05□□□□□ -0.48
PTPN11-201ENST00000351677 HIVEP2P31629 2446 aa12.04□□□□□ -0.48
PTPN11-201ENST00000351677 IGKV3D-7A0A0C4DH55 119 aa12.04□□□□□ -0.48
PTPN11-201ENST00000351677 CCL18P55774 89 aa12.04□□□□□ -0.48
PTPN11-201ENST00000351677 FOXI1Q12951 378 aa12.04□□□□□ -0.48
PTPN11-201ENST00000351677 F8W735 103 aaPredicted RBP12.04□□□□□ -0.48
PTPN11-201ENST00000351677 LECT2O14960 151 aa12.04□□□□□ -0.48
PTPN11-201ENST00000351677 NDUFA11Q86Y39 141 aa12.04□□□□□ -0.48
PTPN11-201ENST00000351677 HCFC1P51610 2035 aa12.04□□□□□ -0.48
PTPN11-201ENST00000351677 B5MCH6 92 aa12.04□□□□□ -0.48
PTPN11-201ENST00000351677 PTPN13Q12923 2485 aa12.03□□□□□ -0.48
PTPN11-201ENST00000351677 IGHV4-28A0A0C4DH34 117 aa12.03□□□□□ -0.48
PTPN11-201ENST00000351677 IGLV2-11P01706 119 aa12.03□□□□□ -0.48
PTPN11-201ENST00000351677 SPAG11BQ08648 103 aa12.03□□□□□ -0.48
PTPN11-201ENST00000351677 NDUFA1O15239 70 aa12.02□□□□□ -0.49
PTPN11-201ENST00000351677 CACNA1AO00555 2505 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms