RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 IGIPA6NJ69 53 aa17.47■□□□□ 0.39
USP25-203ENST00000351097 IGLL5B9A064 214 aa17.47■□□□□ 0.39
USP25-203ENST00000351097 TSHBP01222 138 aa17.47■□□□□ 0.39
USP25-203ENST00000351097 NF1P21359 2839 aa17.47■□□□□ 0.39
USP25-203ENST00000351097 IGKV3-20P01619 116 aa17.47■□□□□ 0.39
USP25-203ENST00000351097 SYT8Q8NBV8 401 aa17.47■□□□□ 0.39
USP25-203ENST00000351097 DLX4Q92988 240 aaPredicted RBP17.47■□□□□ 0.39
USP25-203ENST00000351097 TRAV12-2A0A075B6T6 113 aa17.46■□□□□ 0.39
USP25-203ENST00000351097 TRBV6-5A0A0K0K1A5 114 aa17.46■□□□□ 0.39
USP25-203ENST00000351097 SDHAF1A6NFY7 115 aa17.46■□□□□ 0.39
USP25-203ENST00000351097 SCGB2A2Q13296 93 aa17.46■□□□□ 0.39
USP25-203ENST00000351097 TMEM141Q96I45 108 aa17.46■□□□□ 0.39
USP25-203ENST00000351097 MDFICQ9P1T7 246 aa17.46■□□□□ 0.39
USP25-203ENST00000351097 PEMTQ9UBM1 199 aa17.46■□□□□ 0.39
USP25-203ENST00000351097 PAPPA-AS1Q5QFB9 102 aa17.45■□□□□ 0.38
USP25-203ENST00000351097 C11orf44Q8N8P7 122 aa17.45■□□□□ 0.38
USP25-203ENST00000351097 TRBV27A0A0K0K1C4 114 aa17.45■□□□□ 0.38
USP25-203ENST00000351097 RIPPLY3P57055 190 aa17.45■□□□□ 0.38
USP25-203ENST00000351097 PMVKQ15126 192 aa17.45■□□□□ 0.38
USP25-203ENST00000351097 FAM74A4Q5TZK3 123 aa17.45■□□□□ 0.38
USP25-203ENST00000351097 ZNF479Q96JC4 524 aa17.45■□□□□ 0.38
USP25-203ENST00000351097 AGRNO00468 2067 aa17.44■□□□□ 0.38
USP25-203ENST00000351097 MTORP42345 2549 aa17.44■□□□□ 0.38
USP25-203ENST00000351097 IGLV4-69A0A075B6H9 119 aa17.44■□□□□ 0.38
USP25-203ENST00000351097 IGHV1OR15-1A0A075B7D0 117 aa17.44■□□□□ 0.38
USP25-203ENST00000351097 Q8N1Y9 231 aa17.44■□□□□ 0.38
USP25-203ENST00000351097 LINC01006Q8NI28 216 aa17.44■□□□□ 0.38
USP25-203ENST00000351097 TIMM17AQ99595 171 aa17.44■□□□□ 0.38
USP25-203ENST00000351097 A0A1B0GWB2 263 aa17.43■□□□□ 0.38
USP25-203ENST00000351097 ZNF815PA8K554 130 aa17.43■□□□□ 0.38
USP25-203ENST00000351097 CD28P10747 220 aa17.43■□□□□ 0.38
USP25-203ENST00000351097 RPL39P62891 51 aaKnown RBP17.43■□□□□ 0.38
USP25-203ENST00000351097 C16orf95Q9H693 158 aa17.43■□□□□ 0.38
USP25-203ENST00000351097 C11orf86A6NJI1 115 aa17.43■□□□□ 0.38
USP25-203ENST00000351097 G3V4G9 280 aa17.43■□□□□ 0.38
USP25-203ENST00000351097 HILS1P60008 231 aa17.42■□□□□ 0.38
USP25-203ENST00000351097 SPINK13Q1W4C9 94 aa17.42■□□□□ 0.38
USP25-203ENST00000351097 ZNF418Q8TF45 676 aaPredicted RBP17.42■□□□□ 0.38
USP25-203ENST00000351097 DEFB104AQ8WTQ1 72 aa17.42■□□□□ 0.38
USP25-203ENST00000351097 HERVK_113P61574 105 aa17.42■□□□□ 0.38
USP25-203ENST00000351097 ZNF56Q15929 161 aa17.42■□□□□ 0.38
USP25-203ENST00000351097 FOXI2Q6ZQN5 318 aa17.42■□□□□ 0.38
USP25-203ENST00000351097 RAX2Q96IS3 184 aa17.42■□□□□ 0.38
USP25-203ENST00000351097 CD300EQ496F6 205 aaPredicted RBP17.41■□□□□ 0.38
USP25-203ENST00000351097 M0QY20 66 aa17.4■□□□□ 0.38
USP25-203ENST00000351097 RRN3P1Q2M238 152 aa17.4■□□□□ 0.38
USP25-203ENST00000351097 SCGB1D4Q6XE38 83 aa17.4■□□□□ 0.38
USP25-203ENST00000351097 A0A1W2PRX2 142 aa17.39■□□□□ 0.37
USP25-203ENST00000351097 MORN3Q6PF18 240 aaPredicted RBP17.39■□□□□ 0.37
USP25-203ENST00000351097 TMEM61Q8N0U2 210 aa17.39■□□□□ 0.37
USP25-203ENST00000351097 LY6G6DO95868 133 aa17.39■□□□□ 0.37
USP25-203ENST00000351097 EMP1P54849 157 aa17.39■□□□□ 0.37
USP25-203ENST00000351097 FHL3Q13643 280 aa17.39■□□□□ 0.37
USP25-203ENST00000351097 ZNF256Q9Y2P7 627 aaPredicted RBP17.39■□□□□ 0.37
USP25-203ENST00000351097 TRPT1Q86TN4 253 aaKnown RBP17.38■□□□□ 0.37
USP25-203ENST00000351097 CITED2Q99967 270 aaPredicted RBP17.38■□□□□ 0.37
USP25-203ENST00000351097 PLEKHB2Q96CS7 222 aa17.38■□□□□ 0.37
USP25-203ENST00000351097 RHOHQ15669 191 aa17.37■□□□□ 0.37
USP25-203ENST00000351097 AMTNQ6UX39 209 aa17.37■□□□□ 0.37
USP25-203ENST00000351097 OTOGQ6ZRI0 2925 aa17.37■□□□□ 0.37
USP25-203ENST00000351097 NOTCH2Q04721 2471 aa17.36■□□□□ 0.37
USP25-203ENST00000351097 NSUN5P1Q3KNT7 163 aa17.36■□□□□ 0.37
USP25-203ENST00000351097 ZNF876PQ49A33 203 aa17.36■□□□□ 0.37
USP25-203ENST00000351097 TRGV11A0A075B6L2 103 aa17.36■□□□□ 0.37
USP25-203ENST00000351097 TMEM238LA0A1B0GVL6 79 aa17.36■□□□□ 0.37
USP25-203ENST00000351097 A6NJY4 79 aa17.36■□□□□ 0.37
USP25-203ENST00000351097 TRAV2A0A0B4J234 112 aa17.35■□□□□ 0.37
USP25-203ENST00000351097 DEFB114Q30KQ6 69 aa17.35■□□□□ 0.37
USP25-203ENST00000351097 DYNLRB2Q8TF09 96 aa17.35■□□□□ 0.37
USP25-203ENST00000351097 HIVEP2P31629 2446 aa17.35■□□□□ 0.37
USP25-203ENST00000351097 CCL24O00175 119 aa17.35■□□□□ 0.37
USP25-203ENST00000351097 TSSC4Q9Y5U2 329 aaPredicted RBP17.35■□□□□ 0.37
USP25-203ENST00000351097 F8W1H4 67 aa17.34■□□□□ 0.37
USP25-203ENST00000351097 SRSF9Q13242 221 aaKnown RBP eCLIP17.34■□□□□ 0.37
USP25-203ENST00000351097 DEFB131AP59861 70 aa17.33■□□□□ 0.37
USP25-203ENST00000351097 RPL24P83731 157 aaKnown RBP17.33■□□□□ 0.37
USP25-203ENST00000351097 COTL1Q14019 142 aa17.33■□□□□ 0.37
USP25-203ENST00000351097 TMEM170BQ5T4T1 132 aa17.33■□□□□ 0.36
USP25-203ENST00000351097 ZNRF2Q8NHG8 242 aa17.33■□□□□ 0.36
USP25-203ENST00000351097 SORL1Q92673 2214 aa17.32■□□□□ 0.36
USP25-203ENST00000351097 KNCNA6PVL3 124 aa17.32■□□□□ 0.36
USP25-203ENST00000351097 TEX48A0A1B0GUV7 120 aa17.31■□□□□ 0.36
USP25-203ENST00000351097 H3BMG7 143 aa17.31■□□□□ 0.36
USP25-203ENST00000351097 A0A0J9YY99 117 aa17.3■□□□□ 0.36
USP25-203ENST00000351097 NDUFA7O95182 113 aa17.3■□□□□ 0.36
USP25-203ENST00000351097 I3L3M4 83 aa17.3■□□□□ 0.36
USP25-203ENST00000351097 UBE2D1P51668 147 aa17.3■□□□□ 0.36
USP25-203ENST00000351097 NFE4Q86UQ8 179 aa17.3■□□□□ 0.36
USP25-203ENST00000351097 P0DMU3 169 aa17.29■□□□□ 0.36
USP25-203ENST00000351097 FAM231AP0DMU4 169 aa17.29■□□□□ 0.36
USP25-203ENST00000351097 FAM231CP0DMU5 169 aa17.29■□□□□ 0.36
USP25-203ENST00000351097 TSPEAR-AS2P59090 65 aa17.29■□□□□ 0.36
USP25-203ENST00000351097 C20orf203Q8NBC4 194 aa17.29■□□□□ 0.36
USP25-203ENST00000351097 PGPEP1Q9NXJ5 209 aa17.29■□□□□ 0.36
USP25-203ENST00000351097 RBMY1A1P0DJD3 496 aaKnown RBP17.29■□□□□ 0.36
USP25-203ENST00000351097 RBMY1CP0DJD4 496 aa17.29■□□□□ 0.36
USP25-203ENST00000351097 RBMY1FQ15415 496 aaKnown RBP17.29■□□□□ 0.36
USP25-203ENST00000351097 WFDC2Q14508 124 aa17.28■□□□□ 0.36
USP25-203ENST00000351097 MAP6D1Q9H9H5 199 aa17.28■□□□□ 0.36
USP25-203ENST00000351097 MRPL16Q9NX20 251 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms