RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 SPANXCQ9NY87 97 aa7.71□□□□□ -1.18
CHRNA1-202ENST00000348749 ACACAQ13085 2346 aa7.71□□□□□ -1.18
CHRNA1-202ENST00000348749 ANKHD1Q8IWZ3 2542 aaKnown RBP7.71□□□□□ -1.18
CHRNA1-202ENST00000348749 A0A1B0GX51 115 aa7.7□□□□□ -1.18
CHRNA1-202ENST00000348749 RHOHQ15669 191 aa7.7□□□□□ -1.18
CHRNA1-202ENST00000348749 NSUN5P1Q3KNT7 163 aa7.7□□□□□ -1.18
CHRNA1-202ENST00000348749 C19orf54Q5BKX5 351 aa7.7□□□□□ -1.18
CHRNA1-202ENST00000348749 C9orf153Q5TBE3 101 aa7.7□□□□□ -1.18
CHRNA1-202ENST00000348749 SUMO4Q6EEV6 95 aa7.7□□□□□ -1.18
CHRNA1-202ENST00000348749 C20orf173Q96LM9 149 aa7.7□□□□□ -1.18
CHRNA1-202ENST00000348749 FAM19A4Q96LR4 140 aa7.7□□□□□ -1.18
CHRNA1-202ENST00000348749 ARHGAP32A7KAX9 2087 aa7.7□□□□□ -1.18
CHRNA1-202ENST00000348749 TRGV11A0A075B6L2 103 aa7.7□□□□□ -1.18
CHRNA1-202ENST00000348749 NDUFA4O00483 81 aa7.7□□□□□ -1.18
CHRNA1-202ENST00000348749 ZFP36P26651 326 aaKnown RBP7.7□□□□□ -1.18
CHRNA1-202ENST00000348749 C3orf56Q8N813 242 aa7.7□□□□□ -1.18
CHRNA1-202ENST00000348749 LINC00526Q96FQ7 95 aa7.7□□□□□ -1.18
CHRNA1-202ENST00000348749 SPTBN2O15020 2390 aa7.69□□□□□ -1.18
CHRNA1-202ENST00000348749 ZZEF1O43149 2961 aa7.69□□□□□ -1.18
CHRNA1-202ENST00000348749 IGHV3OR16-13A0A075B7E8 117 aa7.69□□□□□ -1.18
CHRNA1-202ENST00000348749 IGHV3-74A0A0B4J1X5 117 aa7.69□□□□□ -1.18
CHRNA1-202ENST00000348749 H3BUA1 57 aa7.69□□□□□ -1.18
CHRNA1-202ENST00000348749 LY6HO94772 140 aa7.69□□□□□ -1.18
CHRNA1-202ENST00000348749 C5orf56Q8N8D9 126 aa7.69□□□□□ -1.18
CHRNA1-202ENST00000348749 J3KRW8 73 aa7.68□□□□□ -1.18
CHRNA1-202ENST00000348749 CCL21O00585 134 aa7.68□□□□□ -1.18
CHRNA1-202ENST00000348749 SOCS3O14543 225 aa7.68□□□□□ -1.18
CHRNA1-202ENST00000348749 NPFFO15130 113 aa7.68□□□□□ -1.18
CHRNA1-202ENST00000348749 GNRH2O43555 120 aa7.68□□□□□ -1.18
CHRNA1-202ENST00000348749 GRNP28799 593 aaKnown RBP7.68□□□□□ -1.18
CHRNA1-202ENST00000348749 ANKRD11Q6UB99 2663 aaPredicted RBP7.68□□□□□ -1.18
CHRNA1-202ENST00000348749 J3KT08 172 aa7.68□□□□□ -1.18
CHRNA1-202ENST00000348749 SAA4P35542 130 aa7.68□□□□□ -1.18
CHRNA1-202ENST00000348749 SDIM1Q6ZPB5 146 aa7.68□□□□□ -1.18
CHRNA1-202ENST00000348749 LINC00643Q86TS7 51 aa7.68□□□□□ -1.18
CHRNA1-202ENST00000348749 CLEC2BQ92478 149 aa7.68□□□□□ -1.18
CHRNA1-202ENST00000348749 MOB4Q9Y3A3 225 aa7.68□□□□□ -1.18
CHRNA1-202ENST00000348749 PIEZO2Q9H5I5 2752 aa7.67□□□□□ -1.18
CHRNA1-202ENST00000348749 WNK2Q9Y3S1 2297 aa7.67□□□□□ -1.18
CHRNA1-202ENST00000348749 IGHV3-49A0A0A0MS15 119 aa7.67□□□□□ -1.18
CHRNA1-202ENST00000348749 TRAV41A0A0B4J266 112 aa7.67□□□□□ -1.18
CHRNA1-202ENST00000348749 G3V318 75 aa7.67□□□□□ -1.18
CHRNA1-202ENST00000348749 RNASE4P34096 147 aaKnown RBP7.67□□□□□ -1.18
CHRNA1-202ENST00000348749 HERVK_113P63121 156 aa7.67□□□□□ -1.18
CHRNA1-202ENST00000348749 CEMP1Q6PRD7 247 aaPredicted RBP7.67□□□□□ -1.18
CHRNA1-202ENST00000348749 USMG5Q96IX5 58 aa7.67□□□□□ -1.18
CHRNA1-202ENST00000348749 IGHV3-64A0A075B6Q5 118 aa7.66□□□□□ -1.18
CHRNA1-202ENST00000348749 SMIM9A6NGZ8 99 aa7.66□□□□□ -1.18
CHRNA1-202ENST00000348749 I3L3M4 83 aa7.66□□□□□ -1.18
CHRNA1-202ENST00000348749 IGHV3-30-3P0DP02 117 aa7.66□□□□□ -1.18
CHRNA1-202ENST00000348749 CXCL5P42830 114 aa7.66□□□□□ -1.18
CHRNA1-202ENST00000348749 RPS28P62857 69 aaKnown RBP7.66□□□□□ -1.18
CHRNA1-202ENST00000348749 MIAQ16674 131 aa7.66□□□□□ -1.18
CHRNA1-202ENST00000348749 ZNF256Q9Y2P7 627 aaPredicted RBP7.66□□□□□ -1.18
CHRNA1-202ENST00000348749 FASNP49327 2511 aaKnown RBP7.66□□□□□ -1.18
CHRNA1-202ENST00000348749 ADORA2A-AS1P86434 159 aa7.66□□□□□ -1.18
CHRNA1-202ENST00000348749 DCANP1Q8TF63 244 aa7.66□□□□□ -1.18
CHRNA1-202ENST00000348749 MUC4Q99102 2169 aa7.65□□□□□ -1.18
CHRNA1-202ENST00000348749 A0A0J9YXV3 536 aa7.65□□□□□ -1.18
CHRNA1-202ENST00000348749 ATP5J2P56134 94 aa7.65□□□□□ -1.18
CHRNA1-202ENST00000348749 C5orf38Q86SI9 138 aa7.65□□□□□ -1.18
CHRNA1-202ENST00000348749 TMEM61Q8N0U2 210 aa7.65□□□□□ -1.18
CHRNA1-202ENST00000348749 OPRPNQ99935 248 aaPredicted RBP7.65□□□□□ -1.18
CHRNA1-202ENST00000348749 SPXQ9BT56 116 aa7.65□□□□□ -1.18
CHRNA1-202ENST00000348749 TIMM21Q9BVV7 248 aa7.65□□□□□ -1.18
CHRNA1-202ENST00000348749 BOD1L1Q8NFC6 3051 aa7.65□□□□□ -1.19
CHRNA1-202ENST00000348749 IGLV4-3A0A075B6K6 122 aa7.64□□□□□ -1.19
CHRNA1-202ENST00000348749 WIPF1O43516 503 aa7.64□□□□□ -1.19
CHRNA1-202ENST00000348749 COX7CP15954 63 aa7.64□□□□□ -1.19
CHRNA1-202ENST00000348749 C20orf203Q8NBC4 194 aa7.64□□□□□ -1.19
CHRNA1-202ENST00000348749 SMCR5Q8TEV8 140 aa7.64□□□□□ -1.19
CHRNA1-202ENST00000348749 DEFB104AQ8WTQ1 72 aa7.64□□□□□ -1.19
CHRNA1-202ENST00000348749 JPT2Q9H910 190 aa7.64□□□□□ -1.19
CHRNA1-202ENST00000348749 LOC107984640A0A0U1RRK4 108 aa7.64□□□□□ -1.19
CHRNA1-202ENST00000348749 F5H697 171 aa7.64□□□□□ -1.19
CHRNA1-202ENST00000348749 TIMM17BO60830 172 aa7.64□□□□□ -1.19
CHRNA1-202ENST00000348749 PRSS2P07478 247 aa7.64□□□□□ -1.19
CHRNA1-202ENST00000348749 CRYGAP11844 174 aa7.64□□□□□ -1.19
CHRNA1-202ENST00000348749 MRPS36P82909 103 aaKnown RBP7.64□□□□□ -1.19
CHRNA1-202ENST00000348749 ADAMTSL4-AS1Q5T5F5 129 aa7.64□□□□□ -1.19
CHRNA1-202ENST00000348749 FAM19A5Q7Z5A7 132 aaPredicted RBP7.64□□□□□ -1.19
CHRNA1-202ENST00000348749 TMEM219Q86XT9 240 aa7.64□□□□□ -1.19
CHRNA1-202ENST00000348749 LINC00527Q9UJ94 153 aa7.64□□□□□ -1.19
CHRNA1-202ENST00000348749 ZNF580Q9UK33 172 aa7.64□□□□□ -1.19
CHRNA1-202ENST00000348749 ABCA4P78363 2273 aa7.63□□□□□ -1.19
CHRNA1-202ENST00000348749 TRAV8-3A0A0A6YYJ7 113 aa7.63□□□□□ -1.19
CHRNA1-202ENST00000348749 IGHV1-58A0A0C4DH39 117 aa7.63□□□□□ -1.19
CHRNA1-202ENST00000348749 KLLNB2CW77 178 aa7.63□□□□□ -1.19
CHRNA1-202ENST00000348749 LMO4P61968 165 aa7.63□□□□□ -1.19
CHRNA1-202ENST00000348749 KLRB1Q12918 225 aa7.63□□□□□ -1.19
CHRNA1-202ENST00000348749 MGAQ8IWI9 3026 aa7.62□□□□□ -1.19
CHRNA1-202ENST00000348749 A0A087WWL8 130 aa7.62□□□□□ -1.19
CHRNA1-202ENST00000348749 M0QY20 66 aa7.62□□□□□ -1.19
CHRNA1-202ENST00000348749 UCNP55089 124 aa7.62□□□□□ -1.19
CHRNA1-202ENST00000348749 C2orf48Q96LS8 159 aa7.62□□□□□ -1.19
CHRNA1-202ENST00000348749 PEMTQ9UBM1 199 aa7.62□□□□□ -1.19
CHRNA1-202ENST00000348749 NDUFA12Q9UI09 145 aa7.62□□□□□ -1.19
CHRNA1-202ENST00000348749 PYGO1Q9Y3Y4 419 aa7.62□□□□□ -1.19
CHRNA1-202ENST00000348749 HIST1H4AP62805 103 aaKnown RBP7.62□□□□□ -1.19
CHRNA1-202ENST00000348749 Q6ZSV7 163 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms