RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.44□□□□□ -1.7
CLCN3-201ENST00000347613 HOXA3O43365 443 aaPredicted RBP4.44□□□□□ -1.7
CLCN3-201ENST00000347613 CD300EQ496F6 205 aaPredicted RBP4.44□□□□□ -1.7
CLCN3-201ENST00000347613 CEMP1Q6PRD7 247 aaPredicted RBP4.44□□□□□ -1.7
CLCN3-201ENST00000347613 ZFP2Q6ZN57 461 aa4.44□□□□□ -1.7
CLCN3-201ENST00000347613 CYSLTR1Q9Y271 337 aa4.44□□□□□ -1.7
CLCN3-201ENST00000347613 TP53TG1Q9Y2A0 90 aa4.44□□□□□ -1.7
CLCN3-201ENST00000347613 TSSC4Q9Y5U2 329 aaPredicted RBP4.44□□□□□ -1.7
CLCN3-201ENST00000347613 ZNF561-AS1K7EIQ3 104 aa4.44□□□□□ -1.7
CLCN3-201ENST00000347613 K7EQG2 157 aa4.44□□□□□ -1.7
CLCN3-201ENST00000347613 HTN1P15515 57 aa4.44□□□□□ -1.7
CLCN3-201ENST00000347613 SAMD5Q5TGI4 173 aa4.44□□□□□ -1.7
CLCN3-201ENST00000347613 KRTAP1-3Q8IUG1 177 aa4.44□□□□□ -1.7
CLCN3-201ENST00000347613 AMELXQ99217 191 aa4.44□□□□□ -1.7
CLCN3-201ENST00000347613 FASNP49327 2511 aaKnown RBP4.44□□□□□ -1.7
CLCN3-201ENST00000347613 ATP5LO75964 103 aa4.44□□□□□ -1.7
CLCN3-201ENST00000347613 HLA-DRB4P13762 266 aa4.44□□□□□ -1.7
CLCN3-201ENST00000347613 SLC25A16P16260 332 aa4.44□□□□□ -1.7
CLCN3-201ENST00000347613 HOXD3P31249 432 aaPredicted RBP4.44□□□□□ -1.7
CLCN3-201ENST00000347613 C9orf85Q96MD7 179 aa4.44□□□□□ -1.7
CLCN3-201ENST00000347613 YAE1D1Q9NRH1 226 aa4.44□□□□□ -1.7
CLCN3-201ENST00000347613 HIGD1BQ9P298 99 aa4.44□□□□□ -1.7
CLCN3-201ENST00000347613 ZNF256Q9Y2P7 627 aaPredicted RBP4.44□□□□□ -1.7
CLCN3-201ENST00000347613 HLA-DRB4X5D2U9 266 aa4.44□□□□□ -1.7
CLCN3-201ENST00000347613 TRBV7-9A0A0J9YWB2 115 aa4.43□□□□□ -1.7
CLCN3-201ENST00000347613 IGLL5B9A064 214 aa4.43□□□□□ -1.7
CLCN3-201ENST00000347613 H3BUA1 57 aa4.43□□□□□ -1.7
CLCN3-201ENST00000347613 H7C1H1 209 aa4.43□□□□□ -1.7
CLCN3-201ENST00000347613 M0QY20 66 aa4.43□□□□□ -1.7
CLCN3-201ENST00000347613 INSL3P51460 131 aa4.43□□□□□ -1.7
CLCN3-201ENST00000347613 WFDC2Q14508 124 aa4.43□□□□□ -1.7
CLCN3-201ENST00000347613 C12orf74Q32Q52 190 aa4.43□□□□□ -1.7
CLCN3-201ENST00000347613 PRADC1Q9BSG0 188 aa4.43□□□□□ -1.7
CLCN3-201ENST00000347613 SPCS1Q9Y6A9 102 aa4.43□□□□□ -1.7
CLCN3-201ENST00000347613 IGHV4-31P0DP07 118 aa4.43□□□□□ -1.7
CLCN3-201ENST00000347613 RNASE13Q5GAN3 156 aaKnown RBP4.43□□□□□ -1.7
CLCN3-201ENST00000347613 C20orf78Q9BR46 151 aa4.43□□□□□ -1.7
CLCN3-201ENST00000347613 TRAV12-1A0A0B4J245 112 aa4.42□□□□□ -1.7
CLCN3-201ENST00000347613 SDHAF1A6NFY7 115 aa4.42□□□□□ -1.7
CLCN3-201ENST00000347613 H3BMG7 143 aa4.42□□□□□ -1.7
CLCN3-201ENST00000347613 K7EMT4 169 aa4.42□□□□□ -1.7
CLCN3-201ENST00000347613 FSHBP01225 129 aa4.42□□□□□ -1.7
CLCN3-201ENST00000347613 SMIM13P0DJ93 91 aa4.42□□□□□ -1.7
CLCN3-201ENST00000347613 FAM159AQ6UWV7 190 aa4.42□□□□□ -1.7
CLCN3-201ENST00000347613 SMIM15Q7Z3B0 74 aa4.42□□□□□ -1.7
CLCN3-201ENST00000347613 IGHV3-64A0A075B6Q5 118 aa4.42□□□□□ -1.7
CLCN3-201ENST00000347613 MYMXA0A1B0GTQ4 84 aa4.42□□□□□ -1.7
CLCN3-201ENST00000347613 A8MZ25 164 aa4.42□□□□□ -1.7
CLCN3-201ENST00000347613 E9PLD3 99 aa4.42□□□□□ -1.7
CLCN3-201ENST00000347613 F5H697 171 aa4.42□□□□□ -1.7
CLCN3-201ENST00000347613 SH2D6Q7Z4S9 175 aa4.42□□□□□ -1.7
CLCN3-201ENST00000347613 C11orf44Q8N8P7 122 aa4.42□□□□□ -1.7
CLCN3-201ENST00000347613 C2CD3Q4AC94 2353 aa4.42□□□□□ -1.7
CLCN3-201ENST00000347613 A6NDN8 102 aa4.42□□□□□ -1.7
CLCN3-201ENST00000347613 Q6YL49 198 aa4.42□□□□□ -1.7
CLCN3-201ENST00000347613 LINC01356Q8N9X3 169 aa4.42□□□□□ -1.7
CLCN3-201ENST00000347613 HECTD1Q9ULT8 2610 aa4.41□□□□□ -1.7
CLCN3-201ENST00000347613 TEX48A0A1B0GUV7 120 aa4.41□□□□□ -1.7
CLCN3-201ENST00000347613 AP1S3Q96PC3 154 aa4.41□□□□□ -1.7
CLCN3-201ENST00000347613 TRAV26-1A0A087WT03 109 aa4.41□□□□□ -1.7
CLCN3-201ENST00000347613 G3V4G9 280 aa4.41□□□□□ -1.7
CLCN3-201ENST00000347613 LGALS9O00182 355 aa4.41□□□□□ -1.7
CLCN3-201ENST00000347613 SMCPP49901 116 aaPredicted RBP4.41□□□□□ -1.7
CLCN3-201ENST00000347613 ORMDL2Q53FV1 153 aa4.41□□□□□ -1.7
CLCN3-201ENST00000347613 LRRC75A-AS1Q8N1F1 130 aa4.41□□□□□ -1.7
CLCN3-201ENST00000347613 PRO0461Q9UI25 63 aa4.41□□□□□ -1.7
CLCN3-201ENST00000347613 TSPAN13O95857 204 aa4.41□□□□□ -1.7
CLCN3-201ENST00000347613 PLA2G2AP14555 144 aa4.41□□□□□ -1.7
CLCN3-201ENST00000347613 PLNP26678 52 aa4.41□□□□□ -1.7
CLCN3-201ENST00000347613 HIST1H4GQ99525 98 aa4.41□□□□□ -1.7
CLCN3-201ENST00000347613 SPAG8Q99932 426 aaPredicted RBP4.41□□□□□ -1.7
CLCN3-201ENST00000347613 TRBV27A0A0K0K1C4 114 aa4.4□□□□□ -1.7
CLCN3-201ENST00000347613 ADARB2-AS1A8MUL3 147 aa4.4□□□□□ -1.7
CLCN3-201ENST00000347613 MED14OSP0DP75 135 aa4.4□□□□□ -1.7
CLCN3-201ENST00000347613 AZU1P20160 251 aa4.4□□□□□ -1.7
CLCN3-201ENST00000347613 ZNF876PQ49A33 203 aa4.4□□□□□ -1.7
CLCN3-201ENST00000347613 DLX4Q92988 240 aaPredicted RBP4.4□□□□□ -1.7
CLCN3-201ENST00000347613 VPREB3Q9UKI3 123 aa4.4□□□□□ -1.7
CLCN3-201ENST00000347613 PKD1L1Q8TDX9 2849 aa4.4□□□□□ -1.7
CLCN3-201ENST00000347613 IGHV1OR15-1A0A075B7D0 117 aa4.4□□□□□ -1.71
CLCN3-201ENST00000347613 DEFB131AP59861 70 aa4.4□□□□□ -1.71
CLCN3-201ENST00000347613 MRPL23Q16540 153 aaKnown RBP4.4□□□□□ -1.71
CLCN3-201ENST00000347613 TMEM61Q8N0U2 210 aa4.4□□□□□ -1.71
CLCN3-201ENST00000347613 A0A0J9YY99 117 aa4.4□□□□□ -1.71
CLCN3-201ENST00000347613 ZNF815PA8K554 130 aa4.4□□□□□ -1.71
CLCN3-201ENST00000347613 ZNF56Q15929 161 aa4.4□□□□□ -1.71
CLCN3-201ENST00000347613 A0A1B0GWB2 263 aa4.39□□□□□ -1.71
CLCN3-201ENST00000347613 ELANEP08246 267 aa4.39□□□□□ -1.71
CLCN3-201ENST00000347613 C4orf48Q5BLP8 95 aa4.39□□□□□ -1.71
CLCN3-201ENST00000347613 FOXI2Q6ZQN5 318 aa4.39□□□□□ -1.71
CLCN3-201ENST00000347613 Q6ZSV7 163 aa4.39□□□□□ -1.71
CLCN3-201ENST00000347613 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.39□□□□□ -1.71
CLCN3-201ENST00000347613 OR11H1Q8NG94 326 aa4.39□□□□□ -1.71
CLCN3-201ENST00000347613 VPS25Q9BRG1 176 aa4.39□□□□□ -1.71
CLCN3-201ENST00000347613 UNC79Q9P2D8 2635 aa4.39□□□□□ -1.71
CLCN3-201ENST00000347613 IGHV3-38A0A0C4DH36 116 aa4.39□□□□□ -1.71
CLCN3-201ENST00000347613 A0A0J9YXV3 536 aa4.39□□□□□ -1.71
CLCN3-201ENST00000347613 PTH2Q96A98 100 aa4.39□□□□□ -1.71
CLCN3-201ENST00000347613 ESM1Q9NQ30 184 aa4.39□□□□□ -1.71
CLCN3-201ENST00000347613 OR11H12B2RN74 326 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms