RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 DSCR9P59020 149 aa9.24□□□□□ -0.93
COL12A1-202ENST00000345356 TRBV7-3A0A075B6L6 115 aa9.24□□□□□ -0.93
COL12A1-202ENST00000345356 FAM240AA0A1B0GVK7 77 aa9.24□□□□□ -0.93
COL12A1-202ENST00000345356 TMEM223A0PJW6 202 aa9.24□□□□□ -0.93
COL12A1-202ENST00000345356 SMIM9A6NGZ8 99 aa9.24□□□□□ -0.93
COL12A1-202ENST00000345356 FREM1Q5H8C1 2179 aa9.24□□□□□ -0.93
COL12A1-202ENST00000345356 Q6Q795 121 aa9.23□□□□□ -0.93
COL12A1-202ENST00000345356 ENHOQ6UWT2 76 aa9.23□□□□□ -0.93
COL12A1-202ENST00000345356 URB1-AS1Q96HZ7 61 aa9.23□□□□□ -0.93
COL12A1-202ENST00000345356 MYCNOSP40205 109 aa9.23□□□□□ -0.93
COL12A1-202ENST00000345356 WT1P19544 449 aaPredicted RBP9.23□□□□□ -0.93
COL12A1-202ENST00000345356 NCR3O14931 201 aa9.23□□□□□ -0.93
COL12A1-202ENST00000345356 ZNF22P17026 224 aaPredicted RBP9.23□□□□□ -0.93
COL12A1-202ENST00000345356 RPL18AQ02543 176 aaKnown RBP9.23□□□□□ -0.93
COL12A1-202ENST00000345356 FAM110AQ9BQ89 295 aa9.23□□□□□ -0.93
COL12A1-202ENST00000345356 NACAE9PAV3 2078 aa9.23□□□□□ -0.93
COL12A1-202ENST00000345356 K7EQD1 137 aa9.23□□□□□ -0.93
COL12A1-202ENST00000345356 SPTSSBQ8NFR3 76 aa9.23□□□□□ -0.93
COL12A1-202ENST00000345356 TICRRQ7Z2Z1 1910 aa9.22□□□□□ -0.93
COL12A1-202ENST00000345356 MSMBP08118 114 aa9.22□□□□□ -0.93
COL12A1-202ENST00000345356 HRCT1Q6UXD1 115 aa9.22□□□□□ -0.93
COL12A1-202ENST00000345356 C1orf229Q6ZS94 237 aaPredicted RBP9.22□□□□□ -0.93
COL12A1-202ENST00000345356 Q6ZQT7 251 aa9.22□□□□□ -0.93
COL12A1-202ENST00000345356 NBASA2RRP1 2371 aa9.22□□□□□ -0.93
COL12A1-202ENST00000345356 CENPVL3A0A0U1RRI6 287 aa9.21□□□□□ -0.93
COL12A1-202ENST00000345356 USP17L23D6RBM5 183 aa9.21□□□□□ -0.93
COL12A1-202ENST00000345356 AJUBAQ96IF1 538 aa9.21□□□□□ -0.93
COL12A1-202ENST00000345356 PCNX1Q96RV3 2341 aa9.21□□□□□ -0.93
COL12A1-202ENST00000345356 H3BQ85 93 aa9.21□□□□□ -0.94
COL12A1-202ENST00000345356 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.21□□□□□ -0.94
COL12A1-202ENST00000345356 ACACAQ13085 2346 aa9.21□□□□□ -0.94
COL12A1-202ENST00000345356 ATP5EP2Q5VTU8 51 aa9.21□□□□□ -0.94
COL12A1-202ENST00000345356 FANCD2OSQ96PS1 177 aa9.21□□□□□ -0.94
COL12A1-202ENST00000345356 IGLV1-47P01700 117 aa9.2□□□□□ -0.94
COL12A1-202ENST00000345356 IGLV2-11P01706 119 aa9.2□□□□□ -0.94
COL12A1-202ENST00000345356 UBE2DNLQ8IWF7 75 aa9.2□□□□□ -0.94
COL12A1-202ENST00000345356 NOTCH4Q99466 2003 aa9.2□□□□□ -0.94
COL12A1-202ENST00000345356 Q8N9W7 124 aa9.2□□□□□ -0.94
COL12A1-202ENST00000345356 NCKAP5O14513 1909 aa9.2□□□□□ -0.94
COL12A1-202ENST00000345356 GPR179Q6PRD1 2367 aa9.19□□□□□ -0.94
COL12A1-202ENST00000345356 LINC01356Q8N9X3 169 aa9.19□□□□□ -0.94
COL12A1-202ENST00000345356 IGLV10-54A0A075B6I4 117 aa9.19□□□□□ -0.94
COL12A1-202ENST00000345356 NDUFS5O43920 106 aa9.19□□□□□ -0.94
COL12A1-202ENST00000345356 APRG1Q8IVJ8 170 aa9.19□□□□□ -0.94
COL12A1-202ENST00000345356 LINC00308Q8TCZ7 52 aa9.19□□□□□ -0.94
COL12A1-202ENST00000345356 PDE6GP18545 87 aa9.18□□□□□ -0.94
COL12A1-202ENST00000345356 HIGD2BQ4VC39 106 aa9.18□□□□□ -0.94
COL12A1-202ENST00000345356 C1orf195Q5TG92 126 aa9.18□□□□□ -0.94
COL12A1-202ENST00000345356 Q6ZS46 218 aa9.18□□□□□ -0.94
COL12A1-202ENST00000345356 Q8N7P7 452 aa9.18□□□□□ -0.94
COL12A1-202ENST00000345356 COL6A6A6NMZ7 2263 aa9.18□□□□□ -0.94
COL12A1-202ENST00000345356 LST1O00453 97 aa9.18□□□□□ -0.94
COL12A1-202ENST00000345356 SLPIP03973 132 aa9.18□□□□□ -0.94
COL12A1-202ENST00000345356 LY6DQ14210 128 aa9.18□□□□□ -0.94
COL12A1-202ENST00000345356 ABCA4P78363 2273 aa9.18□□□□□ -0.94
COL12A1-202ENST00000345356 ZNF106Q9H2Y7 1883 aaKnown RBP9.18□□□□□ -0.94
COL12A1-202ENST00000345356 PCNX2A6NKB5 2137 aa9.18□□□□□ -0.94
COL12A1-202ENST00000345356 H7C423 109 aa9.18□□□□□ -0.94
COL12A1-202ENST00000345356 CGB3P0DN86 165 aa9.18□□□□□ -0.94
COL12A1-202ENST00000345356 CGB7P0DN87 165 aa9.18□□□□□ -0.94
COL12A1-202ENST00000345356 SPRY4Q9C004 299 aa9.17□□□□□ -0.94
COL12A1-202ENST00000345356 CDKN2A-AS1Q9UH64 79 aa9.17□□□□□ -0.94
COL12A1-202ENST00000345356 IGLV4-3A0A075B6K6 122 aa9.17□□□□□ -0.94
COL12A1-202ENST00000345356 ELANEP08246 267 aa9.17□□□□□ -0.94
COL12A1-202ENST00000345356 HHLA3Q9XRX5 114 aa9.17□□□□□ -0.94
COL12A1-202ENST00000345356 PSCAO43653 123 aa9.17□□□□□ -0.94
COL12A1-202ENST00000345356 CLPSL1A2RUU4 121 aa9.16□□□□□ -0.94
COL12A1-202ENST00000345356 TMEM263Q8WUH6 116 aaKnown RBP9.16□□□□□ -0.94
COL12A1-202ENST00000345356 MSMPQ1L6U9 139 aa9.16□□□□□ -0.94
COL12A1-202ENST00000345356 SNURFQ9Y675 71 aa9.16□□□□□ -0.94
COL12A1-202ENST00000345356 TNCP24821 2201 aa9.16□□□□□ -0.94
COL12A1-202ENST00000345356 NUP210Q8TEM1 1887 aaPredicted RBP9.16□□□□□ -0.94
COL12A1-202ENST00000345356 GAS8-AS1O95177 125 aa9.16□□□□□ -0.94
COL12A1-202ENST00000345356 CXCL5P42830 114 aa9.16□□□□□ -0.94
COL12A1-202ENST00000345356 PIK3CD-AS1Q5SR53 167 aa9.16□□□□□ -0.94
COL12A1-202ENST00000345356 NRACQ8N912 160 aa9.16□□□□□ -0.94
COL12A1-202ENST00000345356 PLXNB1O43157 2135 aa9.16□□□□□ -0.94
COL12A1-202ENST00000345356 IGFL3Q6UXB1 125 aa9.16□□□□□ -0.94
COL12A1-202ENST00000345356 GATA3P23771 443 aa9.15□□□□□ -0.94
COL12A1-202ENST00000345356 SP5Q6BEB4 398 aaPredicted RBP9.15□□□□□ -0.94
COL12A1-202ENST00000345356 SCXQ7RTU7 201 aa9.15□□□□□ -0.94
COL12A1-202ENST00000345356 FAM19A5Q7Z5A7 132 aaPredicted RBP9.15□□□□□ -0.94
COL12A1-202ENST00000345356 PCNX3Q9H6A9 2034 aa9.15□□□□□ -0.94
COL12A1-202ENST00000345356 TIRAPP58753 221 aa9.15□□□□□ -0.94
COL12A1-202ENST00000345356 UNQ9165/PRO28630Q6UXU0 137 aa9.15□□□□□ -0.95
COL12A1-202ENST00000345356 DIRC1Q969H9 104 aa9.15□□□□□ -0.95
COL12A1-202ENST00000345356 TIMM17BO60830 172 aa9.14□□□□□ -0.95
COL12A1-202ENST00000345356 SHISA2Q6UWI4 295 aa9.14□□□□□ -0.95
COL12A1-202ENST00000345356 KIAA1549Q9HCM3 1950 aa9.14□□□□□ -0.95
COL12A1-202ENST00000345356 IGF1P05019 195 aa9.14□□□□□ -0.95
COL12A1-202ENST00000345356 UBE2BP63146 152 aa9.14□□□□□ -0.95
COL12A1-202ENST00000345356 DEFB136Q30KP8 78 aa9.14□□□□□ -0.95
COL12A1-202ENST00000345356 ETDCA0A1B0GVM5 59 aa9.14□□□□□ -0.95
COL12A1-202ENST00000345356 LINC00526Q96FQ7 95 aa9.14□□□□□ -0.95
COL12A1-202ENST00000345356 VPREB3Q9UKI3 123 aa9.14□□□□□ -0.95
COL12A1-202ENST00000345356 GYPEP15421 78 aa9.13□□□□□ -0.95
COL12A1-202ENST00000345356 MAPK1IP1LQ8NDC0 245 aa9.13□□□□□ -0.95
COL12A1-202ENST00000345356 BPY2O14599 106 aa9.13□□□□□ -0.95
COL12A1-202ENST00000345356 C5orf56Q8N8D9 126 aa9.13□□□□□ -0.95
COL12A1-202ENST00000345356 LINC00574Q9H8X3 128 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms