RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 KIF25-AS1Q9Y6Z4 181 aa8.21□□□□□ -1.1
SNCA-202ENST00000345009 TRBV7-3A0A075B6L6 115 aa8.2□□□□□ -1.1
SNCA-202ENST00000345009 ESRGQ1W209 222 aa8.2□□□□□ -1.1
SNCA-202ENST00000345009 LYPD5Q6UWN5 251 aa8.2□□□□□ -1.1
SNCA-202ENST00000345009 ATP6V0E2Q8NHE4 81 aa8.2□□□□□ -1.1
SNCA-202ENST00000345009 FRZBQ92765 325 aa8.2□□□□□ -1.1
SNCA-202ENST00000345009 A0A087WWC5 75 aa8.19□□□□□ -1.1
SNCA-202ENST00000345009 LOC100131303A0A0U1RQF7 123 aa8.19□□□□□ -1.1
SNCA-202ENST00000345009 GAGE12JA6NER3 117 aa8.19□□□□□ -1.1
SNCA-202ENST00000345009 ADCYAP1P18509 176 aa8.19□□□□□ -1.1
SNCA-202ENST00000345009 TIRAPP58753 221 aa8.19□□□□□ -1.1
SNCA-202ENST00000345009 GAGE1Q13065 139 aa8.19□□□□□ -1.1
SNCA-202ENST00000345009 GAGE4Q13068 117 aa8.19□□□□□ -1.1
SNCA-202ENST00000345009 GAGE5Q13069 117 aa8.19□□□□□ -1.1
SNCA-202ENST00000345009 GAGE13Q4V321 117 aa8.19□□□□□ -1.1
SNCA-202ENST00000345009 ZNRF2Q8NHG8 242 aa8.19□□□□□ -1.1
SNCA-202ENST00000345009 DNAJC30Q96LL9 226 aa8.19□□□□□ -1.1
SNCA-202ENST00000345009 TMEM191AQ9H0A3 160 aa8.19□□□□□ -1.1
SNCA-202ENST00000345009 GTSF1LQ9H1H1 148 aa8.19□□□□□ -1.1
SNCA-202ENST00000345009 MRPS16Q9Y3D3 137 aaKnown RBP8.19□□□□□ -1.1
SNCA-202ENST00000345009 LINC00588Q9Y4M8 146 aa8.19□□□□□ -1.1
SNCA-202ENST00000345009 TNFRSF18Q9Y5U5 241 aa8.19□□□□□ -1.1
SNCA-202ENST00000345009 LINC00315P59091 139 aa8.18□□□□□ -1.1
SNCA-202ENST00000345009 C10orf91Q5T1B1 145 aa8.18□□□□□ -1.1
SNCA-202ENST00000345009 KCNIP4Q6PIL6 250 aa8.18□□□□□ -1.1
SNCA-202ENST00000345009 IMMP2LQ96T52 175 aa8.18□□□□□ -1.1
SNCA-202ENST00000345009 UPK3BQ9BT76 320 aa8.18□□□□□ -1.1
SNCA-202ENST00000345009 CARHSP1Q9Y2V2 147 aaKnown RBP8.18□□□□□ -1.1
SNCA-202ENST00000345009 KMT2CQ8NEZ4 4911 aaKnown RBP8.18□□□□□ -1.1
SNCA-202ENST00000345009 TRAV8-6A0A0B4J262 113 aa8.17□□□□□ -1.1
SNCA-202ENST00000345009 M0QY20 66 aa8.17□□□□□ -1.1
SNCA-202ENST00000345009 SUMO4Q6EEV6 95 aa8.17□□□□□ -1.1
SNCA-202ENST00000345009 RASL11AQ6T310 242 aa8.17□□□□□ -1.1
SNCA-202ENST00000345009 ATP5L2Q7Z4Y8 100 aa8.17□□□□□ -1.1
SNCA-202ENST00000345009 DAZ4Q86SG3 579 aaKnown RBP8.17□□□□□ -1.1
SNCA-202ENST00000345009 KRTAP4-7Q9BYR0 210 aa8.17□□□□□ -1.1
SNCA-202ENST00000345009 Q9H8V8 135 aa8.17□□□□□ -1.1
SNCA-202ENST00000345009 DAZ3Q9NR90 486 aaKnown RBP8.17□□□□□ -1.1
SNCA-202ENST00000345009 TMEM242Q9NWH2 141 aa8.17□□□□□ -1.1
SNCA-202ENST00000345009 TRAV9-2A0A087WT02 112 aa8.16□□□□□ -1.1
SNCA-202ENST00000345009 SNAPINO95295 136 aa8.16□□□□□ -1.1
SNCA-202ENST00000345009 PPP1R17O96001 155 aa8.16□□□□□ -1.1
SNCA-202ENST00000345009 APOC3P02656 99 aa8.16□□□□□ -1.1
SNCA-202ENST00000345009 S100PP25815 95 aa8.16□□□□□ -1.1
SNCA-202ENST00000345009 CAMPP49913 170 aa8.16□□□□□ -1.1
SNCA-202ENST00000345009 HBBP68871 147 aa8.16□□□□□ -1.1
SNCA-202ENST00000345009 RHEBQ15382 184 aa8.16□□□□□ -1.1
SNCA-202ENST00000345009 TMEM97Q5BJF2 176 aa8.16□□□□□ -1.1
SNCA-202ENST00000345009 SVBPQ8N300 66 aa8.16□□□□□ -1.1
SNCA-202ENST00000345009 BTF3L4Q96K17 158 aa8.16□□□□□ -1.1
SNCA-202ENST00000345009 NIT2Q9NQR4 276 aa8.16□□□□□ -1.1
SNCA-202ENST00000345009 SIVA1O15304 175 aa8.15□□□□□ -1.1
SNCA-202ENST00000345009 UBE2D3P61077 147 aa8.15□□□□□ -1.1
SNCA-202ENST00000345009 UBE2D2P62837 147 aa8.15□□□□□ -1.1
SNCA-202ENST00000345009 TTC32Q5I0X7 151 aa8.15□□□□□ -1.1
SNCA-202ENST00000345009 OR10J3Q5JRS4 329 aa8.15□□□□□ -1.1
SNCA-202ENST00000345009 LELP1Q5T871 98 aa8.15□□□□□ -1.1
SNCA-202ENST00000345009 MRPL54Q6P161 138 aaKnown RBP8.15□□□□□ -1.1
SNCA-202ENST00000345009 NEXN-AS1Q8NBZ9 246 aa8.15□□□□□ -1.1
SNCA-202ENST00000345009 MRAP2Q96G30 205 aa8.15□□□□□ -1.1
SNCA-202ENST00000345009 LYSTQ99698 3801 aa8.15□□□□□ -1.11
SNCA-202ENST00000345009 TRAV9-1A0A075B6T8 112 aa8.14□□□□□ -1.11
SNCA-202ENST00000345009 C7orf77A4D0Y5 90 aa8.14□□□□□ -1.11
SNCA-202ENST00000345009 K7EP13 123 aa8.14□□□□□ -1.11
SNCA-202ENST00000345009 LINC00694P0DN24 101 aa8.14□□□□□ -1.11
SNCA-202ENST00000345009 CLRN3Q8NCR9 226 aa8.14□□□□□ -1.11
SNCA-202ENST00000345009 SVIPQ8NHG7 77 aa8.14□□□□□ -1.11
SNCA-202ENST00000345009 RPS10P5Q9NQ39 176 aa8.14□□□□□ -1.11
SNCA-202ENST00000345009 IGLV2-18A0A075B6J9 118 aa8.13□□□□□ -1.11
SNCA-202ENST00000345009 RAB4AP20338 218 aa8.13□□□□□ -1.11
SNCA-202ENST00000345009 GATD1Q8NB37 220 aa8.13□□□□□ -1.11
SNCA-202ENST00000345009 Q9UF83 564 aa8.13□□□□□ -1.11
SNCA-202ENST00000345009 TRAV26-2A0A0B4J265 109 aa8.12□□□□□ -1.11
SNCA-202ENST00000345009 IGHV3-38A0A0C4DH36 116 aa8.12□□□□□ -1.11
SNCA-202ENST00000345009 NBDYA0A0U1RRE5 68 aa8.12□□□□□ -1.11
SNCA-202ENST00000345009 PKIAP61925 76 aa8.12□□□□□ -1.11
SNCA-202ENST00000345009 FAM104BQ5XKR9 115 aa8.12□□□□□ -1.11
SNCA-202ENST00000345009 AMN1Q8IY45 258 aa8.12□□□□□ -1.11
SNCA-202ENST00000345009 URGCP-MRPS24S4R325 110 aa8.12□□□□□ -1.11
SNCA-202ENST00000345009 ALMS1Q8TCU4 4167 aa8.11□□□□□ -1.11
SNCA-202ENST00000345009 A0A1B0GXF2 115 aa8.11□□□□□ -1.11
SNCA-202ENST00000345009 M0R2N4 97 aa8.11□□□□□ -1.11
SNCA-202ENST00000345009 PPBPP02775 128 aa8.11□□□□□ -1.11
SNCA-202ENST00000345009 CKS2P33552 79 aa8.11□□□□□ -1.11
SNCA-202ENST00000345009 SLC7A5P1Q8MH63 180 aa8.11□□□□□ -1.11
SNCA-202ENST00000345009 C10orf126Q8N4M7 172 aa8.11□□□□□ -1.11
SNCA-202ENST00000345009 ST20Q9HBF5 79 aa8.11□□□□□ -1.11
SNCA-202ENST00000345009 TRBV6-8A0A0A6YYG3 113 aa8.1□□□□□ -1.11
SNCA-202ENST00000345009 DNAH10OSP0CZ25 163 aa8.1□□□□□ -1.11
SNCA-202ENST00000345009 BTF3P20290 206 aaKnown RBP8.1□□□□□ -1.11
SNCA-202ENST00000345009 COTL1Q14019 142 aa8.1□□□□□ -1.11
SNCA-202ENST00000345009 COX19Q49B96 90 aa8.1□□□□□ -1.11
SNCA-202ENST00000345009 LCE1DQ5T752 114 aa8.1□□□□□ -1.11
SNCA-202ENST00000345009 RNF185Q96GF1 192 aa8.1□□□□□ -1.11
SNCA-202ENST00000345009 VPS13DQ5THJ4 4388 aa8.09□□□□□ -1.11
SNCA-202ENST00000345009 DNAH1Q9P2D7 4330 aa8.09□□□□□ -1.11
SNCA-202ENST00000345009 TRBV25-1A0A075B6N4 114 aa8.09□□□□□ -1.11
SNCA-202ENST00000345009 A0A087WX48 190 aa8.09□□□□□ -1.11
SNCA-202ENST00000345009 IGHV1-24A0A0C4DH33 117 aa8.09□□□□□ -1.11
SNCA-202ENST00000345009 TRBV6-5A0A0K0K1A5 114 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms