RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 KIF25-AS1Q9Y6Z4 181 aa14.35□□□□□ -0.11
SMARCB1-202ENST00000344921 ATP6V0E2Q8NHE4 81 aa14.34□□□□□ -0.11
SMARCB1-202ENST00000344921 DPH3P1Q9H4G8 78 aa14.34□□□□□ -0.11
SMARCB1-202ENST00000344921 Q9H8V8 135 aa14.34□□□□□ -0.11
SMARCB1-202ENST00000344921 TRBV10-1A0A0K0K1A3 114 aa14.32□□□□□ -0.12
SMARCB1-202ENST00000344921 A0A1B0GUT8 65 aa14.32□□□□□ -0.12
SMARCB1-202ENST00000344921 S100A6P06703 90 aa14.32□□□□□ -0.12
SMARCB1-202ENST00000344921 RPL36AP83881 106 aaKnown RBP14.32□□□□□ -0.12
SMARCB1-202ENST00000344921 RPL36ALQ969Q0 106 aaKnown RBP14.32□□□□□ -0.12
SMARCB1-202ENST00000344921 UPK3BQ9BT76 320 aa14.32□□□□□ -0.12
SMARCB1-202ENST00000344921 NAT8BQ9UHF3 227 aa14.32□□□□□ -0.12
SMARCB1-202ENST00000344921 LINC00315P59091 139 aa14.32□□□□□ -0.12
SMARCB1-202ENST00000344921 NUP35Q8NFH5 326 aa14.32□□□□□ -0.12
SMARCB1-202ENST00000344921 RPS10P5Q9NQ39 176 aa14.32□□□□□ -0.12
SMARCB1-202ENST00000344921 C7orf77A4D0Y5 90 aa14.31□□□□□ -0.12
SMARCB1-202ENST00000344921 GTSF1LQ9H1H1 148 aa14.3□□□□□ -0.12
SMARCB1-202ENST00000344921 TRBV7-3A0A075B6L6 115 aa14.29□□□□□ -0.12
SMARCB1-202ENST00000344921 SMIM27A0A1W2PRY6 76 aa14.29□□□□□ -0.12
SMARCB1-202ENST00000344921 H7C1H1 209 aa14.29□□□□□ -0.12
SMARCB1-202ENST00000344921 PPP1R2P9O14990 202 aa14.29□□□□□ -0.12
SMARCB1-202ENST00000344921 SIVA1O15304 175 aa14.29□□□□□ -0.12
SMARCB1-202ENST00000344921 RAB5AP20339 215 aa14.29□□□□□ -0.12
SMARCB1-202ENST00000344921 SUMO4Q6EEV6 95 aa14.29□□□□□ -0.12
SMARCB1-202ENST00000344921 NEXN-AS1Q8NBZ9 246 aa14.29□□□□□ -0.12
SMARCB1-202ENST00000344921 LINC00694P0DN24 101 aa14.28□□□□□ -0.12
SMARCB1-202ENST00000344921 SNRPEP62304 92 aaKnown RBP14.28□□□□□ -0.12
SMARCB1-202ENST00000344921 RIGQ13278 110 aa14.28□□□□□ -0.12
SMARCB1-202ENST00000344921 OR10J3Q5JRS4 329 aa14.27□□□□□ -0.12
SMARCB1-202ENST00000344921 ANAPC16Q96DE5 110 aa14.27□□□□□ -0.12
SMARCB1-202ENST00000344921 NBDYA0A0U1RRE5 68 aa14.27□□□□□ -0.13
SMARCB1-202ENST00000344921 TIRAPP58753 221 aa14.27□□□□□ -0.13
SMARCB1-202ENST00000344921 TRAV8-6A0A0B4J262 113 aa14.26□□□□□ -0.13
SMARCB1-202ENST00000344921 M0QY20 66 aa14.26□□□□□ -0.13
SMARCB1-202ENST00000344921 TNFRSF18Q9Y5U5 241 aa14.26□□□□□ -0.13
SMARCB1-202ENST00000344921 A0A087WWC5 75 aa14.25□□□□□ -0.13
SMARCB1-202ENST00000344921 UBE2D3P61077 147 aa14.25□□□□□ -0.13
SMARCB1-202ENST00000344921 UBE2D2P62837 147 aa14.25□□□□□ -0.13
SMARCB1-202ENST00000344921 RASL11AQ6T310 242 aa14.25□□□□□ -0.13
SMARCB1-202ENST00000344921 WFDC10BQ8IUB3 73 aa14.25□□□□□ -0.13
SMARCB1-202ENST00000344921 LELP1Q5T871 98 aa14.24□□□□□ -0.13
SMARCB1-202ENST00000344921 TRAV26-2A0A0B4J265 109 aa14.24□□□□□ -0.13
SMARCB1-202ENST00000344921 S100PP25815 95 aa14.24□□□□□ -0.13
SMARCB1-202ENST00000344921 TTC32Q5I0X7 151 aa14.24□□□□□ -0.13
SMARCB1-202ENST00000344921 Q6ZR54 194 aa14.24□□□□□ -0.13
SMARCB1-202ENST00000344921 TMEM191AQ9H0A3 160 aa14.24□□□□□ -0.13
SMARCB1-202ENST00000344921 IGHV3-38A0A0C4DH36 116 aa14.23□□□□□ -0.13
SMARCB1-202ENST00000344921 DNAJC30Q96LL9 226 aa14.23□□□□□ -0.13
SMARCB1-202ENST00000344921 CAMPP49913 170 aa14.22□□□□□ -0.13
SMARCB1-202ENST00000344921 YPEL4Q96NS1 127 aa14.22□□□□□ -0.13
SMARCB1-202ENST00000344921 NIT2Q9NQR4 276 aa14.22□□□□□ -0.13
SMARCB1-202ENST00000344921 DNAH6Q9C0G6 4158 aa14.22□□□□□ -0.13
SMARCB1-202ENST00000344921 FABP9Q0Z7S8 132 aa14.21□□□□□ -0.13
SMARCB1-202ENST00000344921 MRPL54Q6P161 138 aaKnown RBP14.21□□□□□ -0.13
SMARCB1-202ENST00000344921 GATD1Q8NB37 220 aa14.21□□□□□ -0.13
SMARCB1-202ENST00000344921 TRAV9-2A0A087WT02 112 aa14.2□□□□□ -0.14
SMARCB1-202ENST00000344921 DAZ4Q86SG3 579 aaKnown RBP14.2□□□□□ -0.14
SMARCB1-202ENST00000344921 DAZ3Q9NR90 486 aaKnown RBP14.2□□□□□ -0.14
SMARCB1-202ENST00000344921 A0A1B0GW15 77 aa14.19□□□□□ -0.14
SMARCB1-202ENST00000344921 AMN1Q8IY45 258 aa14.19□□□□□ -0.14
SMARCB1-202ENST00000344921 C1orf134Q5TEV5 83 aa14.18□□□□□ -0.14
SMARCB1-202ENST00000344921 DNAH10OSP0CZ25 163 aa14.18□□□□□ -0.14
SMARCB1-202ENST00000344921 RAB4AP20338 218 aa14.18□□□□□ -0.14
SMARCB1-202ENST00000344921 HBBP68871 147 aa14.18□□□□□ -0.14
SMARCB1-202ENST00000344921 FRZBQ92765 325 aa14.18□□□□□ -0.14
SMARCB1-202ENST00000344921 KRTAP1-5Q9BYS1 174 aa14.18□□□□□ -0.14
SMARCB1-202ENST00000344921 RPL39LQ96EH5 51 aaKnown RBP14.17□□□□□ -0.14
SMARCB1-202ENST00000344921 CTDSP1Q9GZU7 261 aa14.17□□□□□ -0.14
SMARCB1-202ENST00000344921 RNF185Q96GF1 192 aa14.16□□□□□ -0.14
SMARCB1-202ENST00000344921 TRBV6-8A0A0A6YYG3 113 aa14.15□□□□□ -0.14
SMARCB1-202ENST00000344921 IGHV3-30P01768 117 aa14.15□□□□□ -0.14
SMARCB1-202ENST00000344921 IGHV3-33P01772 117 aa14.15□□□□□ -0.14
SMARCB1-202ENST00000344921 IGHV3-30-3P0DP02 117 aa14.15□□□□□ -0.14
SMARCB1-202ENST00000344921 IGHV3-30-5P0DP03 117 aa14.15□□□□□ -0.14
SMARCB1-202ENST00000344921 TMEM97Q5BJF2 176 aa14.15□□□□□ -0.14
SMARCB1-202ENST00000344921 KCNIP4Q6PIL6 250 aa14.15□□□□□ -0.14
SMARCB1-202ENST00000344921 ATP5L2Q7Z4Y8 100 aa14.15□□□□□ -0.14
SMARCB1-202ENST00000344921 C6orf223Q8N319 242 aa14.15□□□□□ -0.14
SMARCB1-202ENST00000344921 LINC01556Q5JQF7 62 aa14.15□□□□□ -0.14
SMARCB1-202ENST00000344921 MRAP2Q96G30 205 aa14.15□□□□□ -0.14
SMARCB1-202ENST00000344921 TMEM242Q9NWH2 141 aa14.15□□□□□ -0.14
SMARCB1-202ENST00000344921 URGCP-MRPS24S4R325 110 aa14.15□□□□□ -0.14
SMARCB1-202ENST00000344921 K7EP13 123 aa14.14□□□□□ -0.15
SMARCB1-202ENST00000344921 FAM104BQ5XKR9 115 aa14.14□□□□□ -0.15
SMARCB1-202ENST00000344921 A0A1B0GXF2 115 aa14.13□□□□□ -0.15
SMARCB1-202ENST00000344921 C10orf126Q8N4M7 172 aa14.13□□□□□ -0.15
SMARCB1-202ENST00000344921 LINC00587B1AMM8 73 aa14.12□□□□□ -0.15
SMARCB1-202ENST00000344921 DEFB104AQ8WTQ1 72 aa14.12□□□□□ -0.15
SMARCB1-202ENST00000344921 BTF3L4Q96K17 158 aa14.12□□□□□ -0.15
SMARCB1-202ENST00000344921 IMMP2LQ96T52 175 aa14.12□□□□□ -0.15
SMARCB1-202ENST00000344921 TMEM262E9PQX1 116 aa14.12□□□□□ -0.15
SMARCB1-202ENST00000344921 SMKR1H3BMG3 65 aa14.12□□□□□ -0.15
SMARCB1-202ENST00000344921 GAS8-AS1O95177 125 aa14.12□□□□□ -0.15
SMARCB1-202ENST00000344921 NTM-AS1Q6ZSK4 140 aa14.12□□□□□ -0.15
SMARCB1-202ENST00000344921 CHCHD5Q9BSY4 110 aa14.12□□□□□ -0.15
SMARCB1-202ENST00000344921 TRBV25-1A0A075B6N4 114 aa14.11□□□□□ -0.15
SMARCB1-202ENST00000344921 A0A087WX48 190 aa14.11□□□□□ -0.15
SMARCB1-202ENST00000344921 RTL8CO15255 209 aa14.11□□□□□ -0.15
SMARCB1-202ENST00000344921 NCR2O95944 276 aa14.11□□□□□ -0.15
SMARCB1-202ENST00000344921 MRPL51Q4U2R6 128 aaKnown RBP14.11□□□□□ -0.15
SMARCB1-202ENST00000344921 ST20Q9HBF5 79 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms