RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 UBE2D2P62837 147 aa8.23□□□□□ -1.09
SGCA-202ENST00000344627 CCL20P78556 96 aa8.23□□□□□ -1.09
SGCA-202ENST00000344627 WFDC2Q14508 124 aa8.23□□□□□ -1.09
SGCA-202ENST00000344627 DAZAP1Q96EP5 407 aaKnown RBP8.23□□□□□ -1.09
SGCA-202ENST00000344627 J3QL48 77 aa8.22□□□□□ -1.09
SGCA-202ENST00000344627 IFNA1P01562 189 aa8.22□□□□□ -1.09
SGCA-202ENST00000344627 CXCL1P09341 107 aa8.22□□□□□ -1.09
SGCA-202ENST00000344627 ELOBQ15370 118 aa8.22□□□□□ -1.09
SGCA-202ENST00000344627 DEFB104AQ8WTQ1 72 aa8.22□□□□□ -1.09
SGCA-202ENST00000344627 DNAJC30Q96LL9 226 aa8.22□□□□□ -1.09
SGCA-202ENST00000344627 DERL1Q9BUN8 251 aa8.22□□□□□ -1.09
SGCA-202ENST00000344627 MYCBP2O75592 4640 aa8.22□□□□□ -1.09
SGCA-202ENST00000344627 CENPWQ5EE01 88 aa8.21□□□□□ -1.1
SGCA-202ENST00000344627 Q6ZSA8 131 aa8.21□□□□□ -1.1
SGCA-202ENST00000344627 NEXN-AS1Q8NBZ9 246 aa8.21□□□□□ -1.1
SGCA-202ENST00000344627 CHCHD7Q9BUK0 85 aa8.21□□□□□ -1.1
SGCA-202ENST00000344627 TRBV6-8A0A0A6YYG3 113 aa8.2□□□□□ -1.1
SGCA-202ENST00000344627 RAB19A4D1S5 217 aa8.2□□□□□ -1.1
SGCA-202ENST00000344627 RBFOX3A6NFN3 312 aa8.2□□□□□ -1.1
SGCA-202ENST00000344627 SNAI2O43623 268 aa8.2□□□□□ -1.1
SGCA-202ENST00000344627 MGPP08493 103 aa8.2□□□□□ -1.1
SGCA-202ENST00000344627 OR5AL1P0C617 328 aa8.2□□□□□ -1.1
SGCA-202ENST00000344627 GZMBP10144 247 aa8.2□□□□□ -1.1
SGCA-202ENST00000344627 Q8N976 141 aa8.2□□□□□ -1.1
SGCA-202ENST00000344627 OR2D3Q8NGH3 330 aa8.2□□□□□ -1.1
SGCA-202ENST00000344627 CHCHD5Q9BSY4 110 aa8.2□□□□□ -1.1
SGCA-202ENST00000344627 FAM30AQ9NZY2 134 aa8.2□□□□□ -1.1
SGCA-202ENST00000344627 KRTAP29-1A8MX34 341 aaPredicted RBP8.19□□□□□ -1.1
SGCA-202ENST00000344627 CRPP02741 224 aa8.19□□□□□ -1.1
SGCA-202ENST00000344627 GNG4P50150 75 aa8.19□□□□□ -1.1
SGCA-202ENST00000344627 Q0VG73 95 aa8.19□□□□□ -1.1
SGCA-202ENST00000344627 C15orf54Q8N8G6 183 aa8.19□□□□□ -1.1
SGCA-202ENST00000344627 OR10G8Q8NGN5 311 aa8.19□□□□□ -1.1
SGCA-202ENST00000344627 C11orf52Q96A22 123 aa8.19□□□□□ -1.1
SGCA-202ENST00000344627 AP1S3Q96PC3 154 aa8.19□□□□□ -1.1
SGCA-202ENST00000344627 SSBP4Q9BWG4 385 aaPredicted RBP8.19□□□□□ -1.1
SGCA-202ENST00000344627 MED9Q9NWA0 146 aa8.19□□□□□ -1.1
SGCA-202ENST00000344627 XKRY2A2RUG3 117 aa8.18□□□□□ -1.1
SGCA-202ENST00000344627 ANGP03950 147 aaKnown RBP8.18□□□□□ -1.1
SGCA-202ENST00000344627 RPS20P60866 119 aaKnown RBP8.18□□□□□ -1.1
SGCA-202ENST00000344627 LINC01620Q4KN68 170 aa8.18□□□□□ -1.1
SGCA-202ENST00000344627 C4orf48Q5BLP8 95 aa8.18□□□□□ -1.1
SGCA-202ENST00000344627 FER1L6-AS1Q8NA97 138 aa8.18□□□□□ -1.1
SGCA-202ENST00000344627 LYPD6BQ8NI32 183 aa8.18□□□□□ -1.1
SGCA-202ENST00000344627 C1orf43Q9BWL3 253 aa8.18□□□□□ -1.1
SGCA-202ENST00000344627 SRRM2Q9UQ35 2752 aaKnown RBP8.17□□□□□ -1.1
SGCA-202ENST00000344627 PDE6DO43924 150 aa8.17□□□□□ -1.1
SGCA-202ENST00000344627 P01737 135 aa8.17□□□□□ -1.1
SGCA-202ENST00000344627 MEF2BQ02080 365 aaPredicted RBP8.17□□□□□ -1.1
SGCA-202ENST00000344627 C14orf177Q52M58 125 aa8.17□□□□□ -1.1
SGCA-202ENST00000344627 CLLU1Q5K131 121 aa8.17□□□□□ -1.1
SGCA-202ENST00000344627 SERTAD4-AS1Q5TG53 156 aa8.17□□□□□ -1.1
SGCA-202ENST00000344627 FLG2Q5D862 2391 aaPredicted RBP8.17□□□□□ -1.1
SGCA-202ENST00000344627 PKIAP61925 76 aa8.16□□□□□ -1.1
SGCA-202ENST00000344627 CACNG7P62955 275 aa8.16□□□□□ -1.1
SGCA-202ENST00000344627 GAGE6Q13070 117 aa8.16□□□□□ -1.1
SGCA-202ENST00000344627 MPV17L2Q567V2 206 aa8.16□□□□□ -1.1
SGCA-202ENST00000344627 TMEM97Q5BJF2 176 aa8.16□□□□□ -1.1
SGCA-202ENST00000344627 BIN3Q9NQY0 253 aa8.16□□□□□ -1.1
SGCA-202ENST00000344627 TRBV25-1A0A075B6N4 114 aa8.15□□□□□ -1.1
SGCA-202ENST00000344627 H7C1H1 209 aa8.15□□□□□ -1.1
SGCA-202ENST00000344627 NDUFS6O75380 124 aaKnown RBP8.15□□□□□ -1.1
SGCA-202ENST00000344627 IGLV2-8P01709 118 aa8.15□□□□□ -1.1
SGCA-202ENST00000344627 IFITM2Q01629 132 aa8.15□□□□□ -1.1
SGCA-202ENST00000344627 ATRAIDQ6UW56 229 aa8.15□□□□□ -1.1
SGCA-202ENST00000344627 CLPSL2Q6UWE3 100 aa8.15□□□□□ -1.1
SGCA-202ENST00000344627 LINC00528Q8N1L1 170 aa8.15□□□□□ -1.1
SGCA-202ENST00000344627 SMDT1Q9H4I9 107 aa8.15□□□□□ -1.1
SGCA-202ENST00000344627 VAX2Q9UIW0 290 aa8.15□□□□□ -1.1
SGCA-202ENST00000344627 KIF25-AS1Q9Y6Z4 181 aa8.15□□□□□ -1.1
SGCA-202ENST00000344627 C19orf71A6NCJ1 209 aa8.14□□□□□ -1.11
SGCA-202ENST00000344627 F2Z2F3 143 aa8.14□□□□□ -1.11
SGCA-202ENST00000344627 HLA-DQA1P01909 254 aa8.14□□□□□ -1.11
SGCA-202ENST00000344627 IGLC6P0CF74 106 aa8.14□□□□□ -1.11
SGCA-202ENST00000344627 BCL2P10415 239 aa8.14□□□□□ -1.11
SGCA-202ENST00000344627 SUMO4Q6EEV6 95 aa8.14□□□□□ -1.11
SGCA-202ENST00000344627 ENHOQ6UWT2 76 aa8.14□□□□□ -1.11
SGCA-202ENST00000344627 NTM-AS1Q6ZSK4 140 aa8.14□□□□□ -1.11
SGCA-202ENST00000344627 SMIM12Q96EX1 92 aa8.14□□□□□ -1.11
SGCA-202ENST00000344627 IGHV1-24A0A0C4DH33 117 aa8.13□□□□□ -1.11
SGCA-202ENST00000344627 OXTP01178 125 aa8.13□□□□□ -1.11
SGCA-202ENST00000344627 TRGC1P0CF51 173 aa8.13□□□□□ -1.11
SGCA-202ENST00000344627 LYZL1Q6UWQ5 148 aa8.13□□□□□ -1.11
SGCA-202ENST00000344627 CHAC1Q9BUX1 264 aa8.13□□□□□ -1.11
SGCA-202ENST00000344627 EIF5A2Q9GZV4 153 aaKnown RBP8.13□□□□□ -1.11
SGCA-202ENST00000344627 M0QY20 66 aa8.12□□□□□ -1.11
SGCA-202ENST00000344627 RBX1P62877 108 aa8.12□□□□□ -1.11
SGCA-202ENST00000344627 PEA15Q15121 130 aa8.12□□□□□ -1.11
SGCA-202ENST00000344627 TWIST1Q15672 202 aa8.12□□□□□ -1.11
SGCA-202ENST00000344627 RASL11AQ6T310 242 aa8.12□□□□□ -1.11
SGCA-202ENST00000344627 LINC00269Q8N2A0 174 aa8.12□□□□□ -1.11
SGCA-202ENST00000344627 NUDT10Q8NFP7 164 aa8.12□□□□□ -1.11
SGCA-202ENST00000344627 NUDT11Q96G61 164 aa8.12□□□□□ -1.11
SGCA-202ENST00000344627 FAM210AQ96ND0 272 aa8.12□□□□□ -1.11
SGCA-202ENST00000344627 TRBV20OR9-2A0A075B6H5 130 aa8.11□□□□□ -1.11
SGCA-202ENST00000344627 NTF3P20783 257 aa8.11□□□□□ -1.11
SGCA-202ENST00000344627 MIAQ16674 131 aa8.11□□□□□ -1.11
SGCA-202ENST00000344627 RNASE7Q9H1E1 156 aaKnown RBP8.11□□□□□ -1.11
SGCA-202ENST00000344627 DPH3P1Q9H4G8 78 aa8.11□□□□□ -1.11
SGCA-202ENST00000344627 USP17L23D6RBM5 183 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms