RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 PRM2P04554 102 aa9.83□□□□□ -0.84
COL18A1-201ENST00000342220 SPINK13Q1W4C9 94 aa9.83□□□□□ -0.84
COL18A1-201ENST00000342220 C19orf54Q5BKX5 351 aa9.83□□□□□ -0.84
COL18A1-201ENST00000342220 FABP5P3A8MUU1 101 aa9.82□□□□□ -0.84
COL18A1-201ENST00000342220 LINC01619G3V211 115 aa9.82□□□□□ -0.84
COL18A1-201ENST00000342220 IGLC6P0CF74 106 aa9.82□□□□□ -0.84
COL18A1-201ENST00000342220 DKK2Q9UBU2 259 aa9.82□□□□□ -0.84
COL18A1-201ENST00000342220 PF4P02776 101 aa9.82□□□□□ -0.84
COL18A1-201ENST00000342220 LGALS9BQ3B8N2 356 aa9.82□□□□□ -0.84
COL18A1-201ENST00000342220 LGALS9CQ6DKI2 356 aa9.82□□□□□ -0.84
COL18A1-201ENST00000342220 C3orf56Q8N813 242 aa9.82□□□□□ -0.84
COL18A1-201ENST00000342220 UBE2E2Q96LR5 201 aa9.82□□□□□ -0.84
COL18A1-201ENST00000342220 IGKV2D-26A0A0A0MRZ7 120 aa9.81□□□□□ -0.84
COL18A1-201ENST00000342220 CEND1Q8N111 149 aa9.81□□□□□ -0.84
COL18A1-201ENST00000342220 IFI27L1Q96BM0 104 aa9.81□□□□□ -0.84
COL18A1-201ENST00000342220 RAX2Q96IS3 184 aa9.81□□□□□ -0.84
COL18A1-201ENST00000342220 H3BVH4 76 aa9.81□□□□□ -0.84
COL18A1-201ENST00000342220 H3BUA1 57 aa9.81□□□□□ -0.84
COL18A1-201ENST00000342220 CCL24O00175 119 aa9.81□□□□□ -0.84
COL18A1-201ENST00000342220 SNRPD3P62318 126 aaKnown RBP9.81□□□□□ -0.84
COL18A1-201ENST00000342220 C12orf74Q32Q52 190 aa9.81□□□□□ -0.84
COL18A1-201ENST00000342220 TMEM61Q8N0U2 210 aa9.81□□□□□ -0.84
COL18A1-201ENST00000342220 RNF185Q96GF1 192 aa9.81□□□□□ -0.84
COL18A1-201ENST00000342220 KLK9Q9UKQ9 250 aa9.81□□□□□ -0.84
COL18A1-201ENST00000342220 CFHR3Q02985 330 aa9.8□□□□□ -0.84
COL18A1-201ENST00000342220 TTC32Q5I0X7 151 aa9.8□□□□□ -0.84
COL18A1-201ENST00000342220 SPANXN1Q5VSR9 72 aa9.8□□□□□ -0.84
COL18A1-201ENST00000342220 EVI2AP22794 236 aa9.8□□□□□ -0.84
COL18A1-201ENST00000342220 C9orf139Q6ZV77 190 aa9.8□□□□□ -0.84
COL18A1-201ENST00000342220 MGAM2Q2M2H8 2515 aa9.8□□□□□ -0.84
COL18A1-201ENST00000342220 TRBV25-1A0A075B6N4 114 aa9.79□□□□□ -0.84
COL18A1-201ENST00000342220 GATA1P15976 413 aaPredicted RBP9.79□□□□□ -0.84
COL18A1-201ENST00000342220 NBEAL1Q6ZS30 2694 aa9.79□□□□□ -0.84
COL18A1-201ENST00000342220 GAGE2BQ13066 116 aa9.79□□□□□ -0.84
COL18A1-201ENST00000342220 GAGE2EQ4V326 116 aa9.79□□□□□ -0.84
COL18A1-201ENST00000342220 GAGE2DQ9UEU5 116 aa9.79□□□□□ -0.84
COL18A1-201ENST00000342220 NDUFV3P56181 108 aaKnown RBP9.78□□□□□ -0.84
COL18A1-201ENST00000342220 AKAP9Q99996 3911 aa9.78□□□□□ -0.84
COL18A1-201ENST00000342220 A0A087WX48 190 aa9.78□□□□□ -0.84
COL18A1-201ENST00000342220 RRN3P1Q2M238 152 aa9.78□□□□□ -0.84
COL18A1-201ENST00000342220 GPHB5Q86YW7 130 aa9.78□□□□□ -0.84
COL18A1-201ENST00000342220 MAP1LC3AQ9H492 121 aa9.78□□□□□ -0.84
COL18A1-201ENST00000342220 GNRH2O43555 120 aa9.78□□□□□ -0.84
COL18A1-201ENST00000342220 PSMB2P49721 201 aa9.78□□□□□ -0.84
COL18A1-201ENST00000342220 SMCPP49901 116 aaPredicted RBP9.78□□□□□ -0.84
COL18A1-201ENST00000342220 PRR9Q5T870 116 aa9.78□□□□□ -0.84
COL18A1-201ENST00000342220 FAM74A4Q5TZK3 123 aa9.78□□□□□ -0.84
COL18A1-201ENST00000342220 FAM159AQ6UWV7 190 aa9.78□□□□□ -0.84
COL18A1-201ENST00000342220 GTSCR1Q86UQ5 136 aa9.78□□□□□ -0.84
COL18A1-201ENST00000342220 LINC00477Q96M19 166 aa9.78□□□□□ -0.84
COL18A1-201ENST00000342220 LOC107984156A0A0G2JMH3 177 aa9.77□□□□□ -0.84
COL18A1-201ENST00000342220 LEPP41159 167 aa9.77□□□□□ -0.84
COL18A1-201ENST00000342220 ARL17AQ8IVW1 177 aa9.77□□□□□ -0.84
COL18A1-201ENST00000342220 HIST1H4GQ99525 98 aa9.77□□□□□ -0.84
COL18A1-201ENST00000342220 TNFRSF6BO95407 300 aa9.77□□□□□ -0.85
COL18A1-201ENST00000342220 MGPP08493 103 aa9.77□□□□□ -0.85
COL18A1-201ENST00000342220 CRIP2P52943 208 aaPredicted RBP9.77□□□□□ -0.85
COL18A1-201ENST00000342220 WFDC10AQ9H1F0 79 aa9.77□□□□□ -0.85
COL18A1-201ENST00000342220 C11orf21Q9P2W6 132 aa9.77□□□□□ -0.85
COL18A1-201ENST00000342220 CD7P09564 240 aa9.76□□□□□ -0.85
COL18A1-201ENST00000342220 CNFNQ9BYD5 112 aa9.76□□□□□ -0.85
COL18A1-201ENST00000342220 IGKV3D-20A0A0C4DH25 116 aa9.76□□□□□ -0.85
COL18A1-201ENST00000342220 RPL35AP18077 110 aaKnown RBP9.76□□□□□ -0.85
COL18A1-201ENST00000342220 MEIG1Q5JSS6 88 aa9.76□□□□□ -0.85
COL18A1-201ENST00000342220 HIGD1BQ9P298 99 aa9.76□□□□□ -0.85
COL18A1-201ENST00000342220 PEMTQ9UBM1 199 aa9.76□□□□□ -0.85
COL18A1-201ENST00000342220 F5H697 171 aa9.75□□□□□ -0.85
COL18A1-201ENST00000342220 LINC01559Q495D7 138 aa9.75□□□□□ -0.85
COL18A1-201ENST00000342220 CFAP126Q5VTH2 177 aa9.75□□□□□ -0.85
COL18A1-201ENST00000342220 PPDPFLQ8WWR9 84 aa9.75□□□□□ -0.85
COL18A1-201ENST00000342220 CARD19Q96LW7 228 aa9.75□□□□□ -0.85
COL18A1-201ENST00000342220 XCL2Q9UBD3 114 aa9.75□□□□□ -0.85
COL18A1-201ENST00000342220 OVOL1O14753 267 aa9.75□□□□□ -0.85
COL18A1-201ENST00000342220 SNCGO76070 127 aa9.75□□□□□ -0.85
COL18A1-201ENST00000342220 ATP6V0E2Q8NHE4 81 aa9.75□□□□□ -0.85
COL18A1-201ENST00000342220 HILS1P60008 231 aa9.75□□□□□ -0.85
COL18A1-201ENST00000342220 TRAV26-2A0A0B4J265 109 aa9.74□□□□□ -0.85
COL18A1-201ENST00000342220 IFITM1P13164 125 aa9.74□□□□□ -0.85
COL18A1-201ENST00000342220 SPXQ9BT56 116 aa9.74□□□□□ -0.85
COL18A1-201ENST00000342220 PHLDA3Q9Y5J5 127 aa9.74□□□□□ -0.85
COL18A1-201ENST00000342220 IGHV3-73A0A0B4J1V6 119 aa9.74□□□□□ -0.85
COL18A1-201ENST00000342220 CYSRT1A8MQ03 144 aa9.74□□□□□ -0.85
COL18A1-201ENST00000342220 PRSS1P07477 247 aa9.74□□□□□ -0.85
COL18A1-201ENST00000342220 U3KQE9 123 aa9.74□□□□□ -0.85
COL18A1-201ENST00000342220 TMEM158Q8WZ71 300 aa9.74□□□□□ -0.85
COL18A1-201ENST00000342220 RHODO00212 210 aa9.73□□□□□ -0.85
COL18A1-201ENST00000342220 NXT2Q9NPJ8 142 aaKnown RBP9.73□□□□□ -0.85
COL18A1-201ENST00000342220 TRAV4A0A0B4J268 109 aa9.73□□□□□ -0.85
COL18A1-201ENST00000342220 EMP1P54849 157 aa9.73□□□□□ -0.85
COL18A1-201ENST00000342220 RNASE1P07998 156 aaKnown RBP9.72□□□□□ -0.85
COL18A1-201ENST00000342220 RBAKDNA6NC62 111 aa9.72□□□□□ -0.85
COL18A1-201ENST00000342220 ZC2HC1BQ5TFG8 222 aa9.72□□□□□ -0.85
COL18A1-201ENST00000342220 C4orf3Q8WVX3 66 aa9.72□□□□□ -0.85
COL18A1-201ENST00000342220 LINC01546A6NGU7 62 aa9.72□□□□□ -0.85
COL18A1-201ENST00000342220 DCANP1Q8TF63 244 aa9.72□□□□□ -0.85
COL18A1-201ENST00000342220 HHLA3Q9XRX5 114 aa9.72□□□□□ -0.85
COL18A1-201ENST00000342220 A0A087WWL8 130 aa9.71□□□□□ -0.85
COL18A1-201ENST00000342220 TEN1Q86WV5 123 aa9.71□□□□□ -0.85
COL18A1-201ENST00000342220 C14orf178Q8N769 122 aaPredicted RBP9.71□□□□□ -0.85
COL18A1-201ENST00000342220 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms