RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 C11orf44Q8N8P7 122 aa11.41□□□□□ -0.58
BRAT1-201ENST00000340611 KLK5Q9Y337 293 aaPredicted RBP11.41□□□□□ -0.58
BRAT1-201ENST00000340611 TRPT1Q86TN4 253 aaKnown RBP11.4□□□□□ -0.58
BRAT1-201ENST00000340611 HLA-DMBP28068 263 aa11.4□□□□□ -0.58
BRAT1-201ENST00000340611 NTN5Q8WTR8 489 aaPredicted RBP11.4□□□□□ -0.58
BRAT1-201ENST00000340611 LYPD1Q8N2G4 141 aa11.39□□□□□ -0.59
BRAT1-201ENST00000340611 SLC25A20O43772 301 aa11.39□□□□□ -0.59
BRAT1-201ENST00000340611 ORM1P02763 201 aa11.39□□□□□ -0.59
BRAT1-201ENST00000340611 CFHR3Q02985 330 aa11.39□□□□□ -0.59
BRAT1-201ENST00000340611 C18orf65Q6ZTR6 163 aa11.39□□□□□ -0.59
BRAT1-201ENST00000340611 EEF1AKMT3Q96AZ1 226 aa11.39□□□□□ -0.59
BRAT1-201ENST00000340611 IGLV1-40P01703 118 aa11.38□□□□□ -0.59
BRAT1-201ENST00000340611 PRR25Q96S07 402 aa11.38□□□□□ -0.59
BRAT1-201ENST00000340611 EDN2P20800 178 aa11.38□□□□□ -0.59
BRAT1-201ENST00000340611 EMP1P54849 157 aa11.38□□□□□ -0.59
BRAT1-201ENST00000340611 LINC01587Q99440 93 aa11.38□□□□□ -0.59
BRAT1-201ENST00000340611 TENM1Q9UKZ4 2725 aa11.38□□□□□ -0.59
BRAT1-201ENST00000340611 UNQ9165/PRO28630Q6UXU0 137 aa11.37□□□□□ -0.59
BRAT1-201ENST00000340611 FAM19A5Q7Z5A7 132 aaPredicted RBP11.37□□□□□ -0.59
BRAT1-201ENST00000340611 OR10J6PQ8NGY7 276 aa11.37□□□□□ -0.59
BRAT1-201ENST00000340611 RNF185Q96GF1 192 aa11.37□□□□□ -0.59
BRAT1-201ENST00000340611 TRAV25A0A0B4J276 109 aa11.37□□□□□ -0.59
BRAT1-201ENST00000340611 PLEKHB2Q96CS7 222 aa11.37□□□□□ -0.59
BRAT1-201ENST00000340611 EDA2RQ9HAV5 297 aa11.37□□□□□ -0.59
BRAT1-201ENST00000340611 MAST4O15021 2626 aa11.37□□□□□ -0.59
BRAT1-201ENST00000340611 TEX49A0A1B0GTD5 131 aa11.36□□□□□ -0.59
BRAT1-201ENST00000340611 TMEM78Q5T7P6 136 aa11.36□□□□□ -0.59
BRAT1-201ENST00000340611 Q6ZSV7 163 aa11.36□□□□□ -0.59
BRAT1-201ENST00000340611 TNFRSF6BO95407 300 aa11.36□□□□□ -0.59
BRAT1-201ENST00000340611 LGALS1P09382 135 aaKnown RBP11.36□□□□□ -0.59
BRAT1-201ENST00000340611 UBE2D3P61077 147 aa11.36□□□□□ -0.59
BRAT1-201ENST00000340611 UBE2D2P62837 147 aa11.36□□□□□ -0.59
BRAT1-201ENST00000340611 Q8N1Y9 231 aa11.36□□□□□ -0.59
BRAT1-201ENST00000340611 ODF3Q96PU9 254 aa11.36□□□□□ -0.59
BRAT1-201ENST00000340611 TMEM126AQ9H061 195 aa11.36□□□□□ -0.59
BRAT1-201ENST00000340611 SORL1Q92673 2214 aa11.36□□□□□ -0.59
BRAT1-201ENST00000340611 TRAV8-4A0A0B4J246 113 aa11.36□□□□□ -0.59
BRAT1-201ENST00000340611 PSMB8P28062 276 aa11.36□□□□□ -0.59
BRAT1-201ENST00000340611 DEFB136Q30KP8 78 aa11.36□□□□□ -0.59
BRAT1-201ENST00000340611 DUX3Q96PT4 197 aa11.36□□□□□ -0.59
BRAT1-201ENST00000340611 ZNF575Q86XF7 245 aa11.35□□□□□ -0.59
BRAT1-201ENST00000340611 TRAV2A0A0B4J234 112 aa11.35□□□□□ -0.59
BRAT1-201ENST00000340611 IGLC6P0CF74 106 aa11.35□□□□□ -0.59
BRAT1-201ENST00000340611 ASIPP42127 132 aa11.35□□□□□ -0.59
BRAT1-201ENST00000340611 KHDC1LQ5JSQ8 128 aa11.35□□□□□ -0.59
BRAT1-201ENST00000340611 KLHL30-AS1Q8NEE0 82 aa11.35□□□□□ -0.59
BRAT1-201ENST00000340611 ZFAND3Q9H8U3 227 aa11.35□□□□□ -0.59
BRAT1-201ENST00000340611 TRBV7-1A0A0A6YYK4 115 aa11.34□□□□□ -0.59
BRAT1-201ENST00000340611 FAM223BA6NKX1 122 aa11.34□□□□□ -0.59
BRAT1-201ENST00000340611 ZNF815PA8K554 130 aa11.34□□□□□ -0.59
BRAT1-201ENST00000340611 ATP5LO75964 103 aa11.34□□□□□ -0.59
BRAT1-201ENST00000340611 IGHG4P01861 327 aa11.34□□□□□ -0.59
BRAT1-201ENST00000340611 ERCC8Q13216 396 aa11.34□□□□□ -0.59
BRAT1-201ENST00000340611 ZNF56Q15929 161 aa11.34□□□□□ -0.59
BRAT1-201ENST00000340611 FAM223AQ8IWN6 122 aa11.34□□□□□ -0.59
BRAT1-201ENST00000340611 MYOZ3Q8TDC0 251 aa11.34□□□□□ -0.59
BRAT1-201ENST00000340611 DNAJC30Q96LL9 226 aa11.34□□□□□ -0.59
BRAT1-201ENST00000340611 CLPSL1A2RUU4 121 aa11.33□□□□□ -0.6
BRAT1-201ENST00000340611 MDFICQ9P1T7 246 aa11.33□□□□□ -0.6
BRAT1-201ENST00000340611 ATRQ13535 2644 aa11.33□□□□□ -0.6
BRAT1-201ENST00000340611 CD7P09564 240 aa11.33□□□□□ -0.6
BRAT1-201ENST00000340611 C9orf153Q5TBE3 101 aa11.33□□□□□ -0.6
BRAT1-201ENST00000340611 C10orf126Q8N4M7 172 aa11.33□□□□□ -0.6
BRAT1-201ENST00000340611 PDE6HQ13956 83 aa11.32□□□□□ -0.6
BRAT1-201ENST00000340611 KLK9Q2XQG4 91 aa11.32□□□□□ -0.6
BRAT1-201ENST00000340611 LYRM7Q5U5X0 104 aa11.32□□□□□ -0.6
BRAT1-201ENST00000340611 KLK9Q9UKQ9 250 aa11.32□□□□□ -0.6
BRAT1-201ENST00000340611 PSMG4Q5JS54 123 aa11.32□□□□□ -0.6
BRAT1-201ENST00000340611 IGKV3-7A0A075B6H7 116 aa11.32□□□□□ -0.6
BRAT1-201ENST00000340611 TRAV26-2A0A0B4J265 109 aa11.32□□□□□ -0.6
BRAT1-201ENST00000340611 NDUFA11Q86Y39 141 aa11.32□□□□□ -0.6
BRAT1-201ENST00000340611 NXT2Q9NPJ8 142 aaKnown RBP11.31□□□□□ -0.6
BRAT1-201ENST00000340611 A0A1W2PRX2 142 aa11.31□□□□□ -0.6
BRAT1-201ENST00000340611 PRAC2D3DTV9 90 aa11.31□□□□□ -0.6
BRAT1-201ENST00000340611 UBE2D1P51668 147 aa11.31□□□□□ -0.6
BRAT1-201ENST00000340611 SMAD5-AS1Q9Y6J3 95 aa11.31□□□□□ -0.6
BRAT1-201ENST00000340611 VWFP04275 2813 aa11.3□□□□□ -0.6
BRAT1-201ENST00000340611 HERVK_113P63121 156 aa11.3□□□□□ -0.6
BRAT1-201ENST00000340611 SBSPONQ8IVN8 264 aa11.3□□□□□ -0.6
BRAT1-201ENST00000340611 USMG5Q96IX5 58 aa11.3□□□□□ -0.6
BRAT1-201ENST00000340611 PRADC1Q9BSG0 188 aa11.3□□□□□ -0.6
BRAT1-201ENST00000340611 RNF182Q8N6D2 247 aa11.29□□□□□ -0.6
BRAT1-201ENST00000340611 FAM236AA0A1B0GUQ0 79 aa11.29□□□□□ -0.6
BRAT1-201ENST00000340611 FAM236BA0A1B0GV22 79 aa11.29□□□□□ -0.6
BRAT1-201ENST00000340611 Q6Q795 121 aa11.29□□□□□ -0.6
BRAT1-201ENST00000340611 CEMP1Q6PRD7 247 aaPredicted RBP11.29□□□□□ -0.6
BRAT1-201ENST00000340611 IGHV4OR15-8A0A075B7B6 117 aa11.28□□□□□ -0.6
BRAT1-201ENST00000340611 A0A087WW49 117 aa11.28□□□□□ -0.6
BRAT1-201ENST00000340611 H3BUA1 57 aa11.28□□□□□ -0.6
BRAT1-201ENST00000340611 Q8N2B8 174 aa11.28□□□□□ -0.6
BRAT1-201ENST00000340611 DUSP14O95147 198 aaKnown RBP11.28□□□□□ -0.6
BRAT1-201ENST00000340611 CFC1BP0CG36 223 aa11.28□□□□□ -0.6
BRAT1-201ENST00000340611 CFC1P0CG37 223 aa11.28□□□□□ -0.6
BRAT1-201ENST00000340611 HILS1P60008 231 aa11.27□□□□□ -0.6
BRAT1-201ENST00000340611 TMEM86BQ8N661 226 aa11.27□□□□□ -0.6
BRAT1-201ENST00000340611 Q8N8P6 123 aa11.27□□□□□ -0.6
BRAT1-201ENST00000340611 TRGV11A0A075B6L2 103 aa11.27□□□□□ -0.61
BRAT1-201ENST00000340611 BUB3O43684 328 aa11.27□□□□□ -0.61
BRAT1-201ENST00000340611 COX8CQ7Z4L0 72 aa11.27□□□□□ -0.61
BRAT1-201ENST00000340611 LINC01006Q8NI28 216 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms