RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 LYPD5Q6UWN5 251 aa9.78□□□□□ -0.84
CTSL-201ENST00000340342 ATP5L2Q7Z4Y8 100 aa9.78□□□□□ -0.84
CTSL-201ENST00000340342 ZNRF2Q8NHG8 242 aa9.78□□□□□ -0.84
CTSL-201ENST00000340342 CNFNQ9BYD5 112 aa9.78□□□□□ -0.84
CTSL-201ENST00000340342 GAGE12JA6NER3 117 aa9.77□□□□□ -0.85
CTSL-201ENST00000340342 SMIM17P0DL12 118 aa9.77□□□□□ -0.85
CTSL-201ENST00000340342 RAB5AP20339 215 aa9.77□□□□□ -0.85
CTSL-201ENST00000340342 EVI2AP22794 236 aa9.77□□□□□ -0.85
CTSL-201ENST00000340342 LINC00315P59091 139 aa9.77□□□□□ -0.85
CTSL-201ENST00000340342 GAGE1Q13065 139 aa9.77□□□□□ -0.85
CTSL-201ENST00000340342 GAGE4Q13068 117 aa9.77□□□□□ -0.85
CTSL-201ENST00000340342 GAGE5Q13069 117 aa9.77□□□□□ -0.85
CTSL-201ENST00000340342 TWIST1Q15672 202 aa9.77□□□□□ -0.85
CTSL-201ENST00000340342 GAGE13Q4V321 117 aa9.77□□□□□ -0.85
CTSL-201ENST00000340342 WDR73Q6P4I2 378 aa9.77□□□□□ -0.85
CTSL-201ENST00000340342 MRPS16Q9Y3D3 137 aaKnown RBP9.77□□□□□ -0.85
CTSL-201ENST00000340342 A0A1B0GXF2 115 aa9.76□□□□□ -0.85
CTSL-201ENST00000340342 F5H697 171 aa9.76□□□□□ -0.85
CTSL-201ENST00000340342 MGPP08493 103 aa9.76□□□□□ -0.85
CTSL-201ENST00000340342 LINC00694P0DN24 101 aa9.76□□□□□ -0.85
CTSL-201ENST00000340342 RAB4BP61018 213 aa9.76□□□□□ -0.85
CTSL-201ENST00000340342 COX19Q49B96 90 aa9.76□□□□□ -0.85
CTSL-201ENST00000340342 RASL11AQ6T310 242 aa9.76□□□□□ -0.85
CTSL-201ENST00000340342 Q6ZR54 194 aa9.76□□□□□ -0.85
CTSL-201ENST00000340342 A0A1B0GW15 77 aa9.75□□□□□ -0.85
CTSL-201ENST00000340342 TRGC1P0CF51 173 aa9.75□□□□□ -0.85
CTSL-201ENST00000340342 UPK3BQ9BT76 320 aa9.75□□□□□ -0.85
CTSL-201ENST00000340342 S100A8P05109 93 aa9.74□□□□□ -0.85
CTSL-201ENST00000340342 RPS10P46783 165 aaKnown RBP9.74□□□□□ -0.85
CTSL-201ENST00000340342 CAMPP49913 170 aa9.74□□□□□ -0.85
CTSL-201ENST00000340342 HBBP68871 147 aa9.74□□□□□ -0.85
CTSL-201ENST00000340342 LINC00336Q6ZUF6 198 aa9.74□□□□□ -0.85
CTSL-201ENST00000340342 SH2D6Q7Z4S9 175 aa9.74□□□□□ -0.85
CTSL-201ENST00000340342 Q9H8V8 135 aa9.74□□□□□ -0.85
CTSL-201ENST00000340342 FAT2Q9NYQ8 4349 aa9.74□□□□□ -0.85
CTSL-201ENST00000340342 DNAH17Q9UFH2 4485 aa9.74□□□□□ -0.85
CTSL-201ENST00000340342 ATP6V0E2Q8NHE4 81 aa9.73□□□□□ -0.85
CTSL-201ENST00000340342 GNB1LQ9BYB4 327 aa9.73□□□□□ -0.85
CTSL-201ENST00000340342 TRBV10-1A0A0K0K1A3 114 aa9.73□□□□□ -0.85
CTSL-201ENST00000340342 SUMO4Q6EEV6 95 aa9.73□□□□□ -0.85
CTSL-201ENST00000340342 TMEM136Q6ZRR5 245 aa9.73□□□□□ -0.85
CTSL-201ENST00000340342 WFDC10BQ8IUB3 73 aa9.73□□□□□ -0.85
CTSL-201ENST00000340342 GATD1Q8NB37 220 aa9.73□□□□□ -0.85
CTSL-201ENST00000340342 NEXN-AS1Q8NBZ9 246 aa9.73□□□□□ -0.85
CTSL-201ENST00000340342 DPH3P1Q9H4G8 78 aa9.73□□□□□ -0.85
CTSL-201ENST00000340342 MT-ND6P03923 174 aa9.72□□□□□ -0.85
CTSL-201ENST00000340342 GTSF1LQ9H1H1 148 aa9.72□□□□□ -0.85
CTSL-201ENST00000340342 TRAPPC1Q9Y5R8 145 aa9.72□□□□□ -0.85
CTSL-201ENST00000340342 HECTD4Q9Y4D8 3996 aa9.71□□□□□ -0.86
CTSL-201ENST00000340342 TRBV7-3A0A075B6L6 115 aa9.71□□□□□ -0.86
CTSL-201ENST00000340342 NBDYA0A0U1RRE5 68 aa9.71□□□□□ -0.86
CTSL-201ENST00000340342 M0QY20 66 aa9.71□□□□□ -0.86
CTSL-201ENST00000340342 HLA-DQA1P01909 254 aa9.71□□□□□ -0.86
CTSL-201ENST00000340342 RPL36AP83881 106 aaKnown RBP9.71□□□□□ -0.86
CTSL-201ENST00000340342 C1orf134Q5TEV5 83 aa9.71□□□□□ -0.86
CTSL-201ENST00000340342 RPL36ALQ969Q0 106 aaKnown RBP9.71□□□□□ -0.86
CTSL-201ENST00000340342 KRTAP1-5Q9BYS1 174 aa9.71□□□□□ -0.86
CTSL-201ENST00000340342 TRAV26-2A0A0B4J265 109 aa9.7□□□□□ -0.86
CTSL-201ENST00000340342 RTL8CO15255 209 aa9.7□□□□□ -0.86
CTSL-201ENST00000340342 SIVA1O15304 175 aa9.7□□□□□ -0.86
CTSL-201ENST00000340342 TIRAPP58753 221 aa9.7□□□□□ -0.86
CTSL-201ENST00000340342 UBE2D3P61077 147 aa9.7□□□□□ -0.86
CTSL-201ENST00000340342 UBE2D2P62837 147 aa9.7□□□□□ -0.86
CTSL-201ENST00000340342 SMIM15Q7Z3B0 74 aa9.7□□□□□ -0.86
CTSL-201ENST00000340342 FRZBQ92765 325 aa9.7□□□□□ -0.86
CTSL-201ENST00000340342 TMEM191AQ9H0A3 160 aa9.7□□□□□ -0.86
CTSL-201ENST00000340342 MRPL18Q9H0U6 180 aaKnown RBP9.7□□□□□ -0.86
CTSL-201ENST00000340342 TRGC2P03986 189 aa9.69□□□□□ -0.86
CTSL-201ENST00000340342 FABP9Q0Z7S8 132 aa9.69□□□□□ -0.86
CTSL-201ENST00000340342 IGHV3-38A0A0C4DH36 116 aa9.68□□□□□ -0.86
CTSL-201ENST00000340342 OR10J3Q5JRS4 329 aa9.68□□□□□ -0.86
CTSL-201ENST00000340342 LELP1Q5T871 98 aa9.68□□□□□ -0.86
CTSL-201ENST00000340342 C1orf196B1AJZ1 125 aa9.67□□□□□ -0.86
CTSL-201ENST00000340342 H7C1H1 209 aa9.67□□□□□ -0.86
CTSL-201ENST00000340342 APCSP02743 223 aa9.67□□□□□ -0.86
CTSL-201ENST00000340342 TTC32Q5I0X7 151 aa9.67□□□□□ -0.86
CTSL-201ENST00000340342 FAM104BQ5XKR9 115 aa9.67□□□□□ -0.86
CTSL-201ENST00000340342 PRSS29PA6NIE9 313 aa9.66□□□□□ -0.86
CTSL-201ENST00000340342 TNFRSF18Q9Y5U5 241 aa9.66□□□□□ -0.86
CTSL-201ENST00000340342 PKHD1P08F94 4074 aa9.66□□□□□ -0.86
CTSL-201ENST00000340342 TRAV8-6A0A0B4J262 113 aa9.65□□□□□ -0.86
CTSL-201ENST00000340342 PHOX2AO14813 284 aa9.65□□□□□ -0.86
CTSL-201ENST00000340342 GAS8-AS1O95177 125 aa9.65□□□□□ -0.86
CTSL-201ENST00000340342 DNAH10OSP0CZ25 163 aa9.65□□□□□ -0.86
CTSL-201ENST00000340342 BTF3P20290 206 aaKnown RBP9.65□□□□□ -0.86
CTSL-201ENST00000340342 AMN1Q8IY45 258 aa9.65□□□□□ -0.86
CTSL-201ENST00000340342 Q8N3U1 123 aa9.65□□□□□ -0.86
CTSL-201ENST00000340342 RPL39LQ96EH5 51 aaKnown RBP9.65□□□□□ -0.86
CTSL-201ENST00000340342 RNF185Q96GF1 192 aa9.65□□□□□ -0.86
CTSL-201ENST00000340342 PKD1P98161 4303 aa9.65□□□□□ -0.86
CTSL-201ENST00000340342 BIRC6Q9NR09 4857 aa9.65□□□□□ -0.86
CTSL-201ENST00000340342 RAB4AP20338 218 aa9.65□□□□□ -0.87
CTSL-201ENST00000340342 RAB5BP61020 215 aa9.65□□□□□ -0.87
CTSL-201ENST00000340342 KIAA1644Q3SXP7 199 aa9.65□□□□□ -0.87
CTSL-201ENST00000340342 C6orf223Q8N319 242 aa9.65□□□□□ -0.87
CTSL-201ENST00000340342 DNAJC30Q96LL9 226 aa9.65□□□□□ -0.87
CTSL-201ENST00000340342 NIT2Q9NQR4 276 aa9.65□□□□□ -0.87
CTSL-201ENST00000340342 MRPL51Q4U2R6 128 aaKnown RBP9.64□□□□□ -0.87
CTSL-201ENST00000340342 DEFB104AQ8WTQ1 72 aa9.64□□□□□ -0.87
CTSL-201ENST00000340342 DNAH11Q96DT5 4516 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms