RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 WFDC10BQ8IUB3 73 aa8.79□□□□□ -1
SRSF3-201ENST00000339436 F8W036 122 aa8.78□□□□□ -1
SRSF3-201ENST00000339436 PPP1R2P9O14990 202 aa8.78□□□□□ -1
SRSF3-201ENST00000339436 TTC32Q5I0X7 151 aa8.78□□□□□ -1
SRSF3-201ENST00000339436 LELP1Q5T871 98 aa8.78□□□□□ -1
SRSF3-201ENST00000339436 SMIM15Q7Z3B0 74 aa8.78□□□□□ -1
SRSF3-201ENST00000339436 KRTAP1-5Q9BYS1 174 aa8.78□□□□□ -1
SRSF3-201ENST00000339436 EPPK1P58107 5090 aaKnown RBP8.77□□□□□ -1
SRSF3-201ENST00000339436 SEC11CQ9BY50 192 aa8.77□□□□□ -1.01
SRSF3-201ENST00000339436 MT-ND4LP03901 98 aa8.76□□□□□ -1.01
SRSF3-201ENST00000339436 DNAH10OSP0CZ25 163 aa8.76□□□□□ -1.01
SRSF3-201ENST00000339436 RIGQ13278 110 aa8.76□□□□□ -1.01
SRSF3-201ENST00000339436 OR10J3Q5JRS4 329 aa8.76□□□□□ -1.01
SRSF3-201ENST00000339436 RASL11AQ6T310 242 aa8.76□□□□□ -1.01
SRSF3-201ENST00000339436 TMEM191AQ9H0A3 160 aa8.76□□□□□ -1.01
SRSF3-201ENST00000339436 A0A087WWC5 75 aa8.75□□□□□ -1.01
SRSF3-201ENST00000339436 TRAV8-6A0A0B4J262 113 aa8.75□□□□□ -1.01
SRSF3-201ENST00000339436 TRAV26-2A0A0B4J265 109 aa8.75□□□□□ -1.01
SRSF3-201ENST00000339436 ANAPC16Q96DE5 110 aa8.75□□□□□ -1.01
SRSF3-201ENST00000339436 DNAJC30Q96LL9 226 aa8.75□□□□□ -1.01
SRSF3-201ENST00000339436 HECTD4Q9Y4D8 3996 aa8.75□□□□□ -1.01
SRSF3-201ENST00000339436 IGHV3-38A0A0C4DH36 116 aa8.75□□□□□ -1.01
SRSF3-201ENST00000339436 DAZ4Q86SG3 579 aaKnown RBP8.75□□□□□ -1.01
SRSF3-201ENST00000339436 GATD1Q8NB37 220 aa8.75□□□□□ -1.01
SRSF3-201ENST00000339436 DAZ3Q9NR90 486 aaKnown RBP8.75□□□□□ -1.01
SRSF3-201ENST00000339436 PKHD1P08F94 4074 aa8.74□□□□□ -1.01
SRSF3-201ENST00000339436 LINC01556Q5JQF7 62 aa8.74□□□□□ -1.01
SRSF3-201ENST00000339436 C10orf91Q5T1B1 145 aa8.74□□□□□ -1.01
SRSF3-201ENST00000339436 FRZBQ92765 325 aa8.74□□□□□ -1.01
SRSF3-201ENST00000339436 KRTAP3-3Q9BYR6 98 aa8.74□□□□□ -1.01
SRSF3-201ENST00000339436 KRTAP3-2Q9BYR7 98 aa8.74□□□□□ -1.01
SRSF3-201ENST00000339436 NIT2Q9NQR4 276 aa8.74□□□□□ -1.01
SRSF3-201ENST00000339436 CARHSP1Q9Y2V2 147 aaKnown RBP8.74□□□□□ -1.01
SRSF3-201ENST00000339436 TNFRSF18Q9Y5U5 241 aa8.74□□□□□ -1.01
SRSF3-201ENST00000339436 A0A1B0GW15 77 aa8.73□□□□□ -1.01
SRSF3-201ENST00000339436 A0A1B0GXF2 115 aa8.73□□□□□ -1.01
SRSF3-201ENST00000339436 C1orf134Q5TEV5 83 aa8.73□□□□□ -1.01
SRSF3-201ENST00000339436 AMN1Q8IY45 258 aa8.73□□□□□ -1.01
SRSF3-201ENST00000339436 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.73□□□□□ -1.01
SRSF3-201ENST00000339436 RNF185Q96GF1 192 aa8.73□□□□□ -1.01
SRSF3-201ENST00000339436 TRBV6-8A0A0A6YYG3 113 aa8.72□□□□□ -1.01
SRSF3-201ENST00000339436 K7EP13 123 aa8.72□□□□□ -1.01
SRSF3-201ENST00000339436 RTL8CO15255 209 aa8.72□□□□□ -1.01
SRSF3-201ENST00000339436 CAMPP49913 170 aa8.72□□□□□ -1.01
SRSF3-201ENST00000339436 HBBP68871 147 aa8.72□□□□□ -1.01
SRSF3-201ENST00000339436 MRPL54Q6P161 138 aaKnown RBP8.72□□□□□ -1.01
SRSF3-201ENST00000339436 ATP5L2Q7Z4Y8 100 aa8.72□□□□□ -1.01
SRSF3-201ENST00000339436 C6orf223Q8N319 242 aa8.72□□□□□ -1.01
SRSF3-201ENST00000339436 RPL39LQ96EH5 51 aaKnown RBP8.72□□□□□ -1.01
SRSF3-201ENST00000339436 PKD1P98161 4303 aa8.71□□□□□ -1.01
SRSF3-201ENST00000339436 S100A8P05109 93 aa8.71□□□□□ -1.01
SRSF3-201ENST00000339436 BTF3P20290 206 aaKnown RBP8.71□□□□□ -1.01
SRSF3-201ENST00000339436 RAB4AP20338 218 aa8.71□□□□□ -1.01
SRSF3-201ENST00000339436 C10orf126Q8N4M7 172 aa8.71□□□□□ -1.01
SRSF3-201ENST00000339436 MRAP2Q96G30 205 aa8.71□□□□□ -1.01
SRSF3-201ENST00000339436 DNAH11Q96DT5 4516 aa8.71□□□□□ -1.02
SRSF3-201ENST00000339436 TRAV9-2A0A087WT02 112 aa8.7□□□□□ -1.02
SRSF3-201ENST00000339436 TMEM97Q5BJF2 176 aa8.7□□□□□ -1.02
SRSF3-201ENST00000339436 Q8N3U1 123 aa8.7□□□□□ -1.02
SRSF3-201ENST00000339436 CTDSP1Q9GZU7 261 aa8.7□□□□□ -1.02
SRSF3-201ENST00000339436 GAS8-AS1O95177 125 aa8.7□□□□□ -1.02
SRSF3-201ENST00000339436 FAM104BQ5XKR9 115 aa8.7□□□□□ -1.02
SRSF3-201ENST00000339436 NTM-AS1Q6ZSK4 140 aa8.7□□□□□ -1.02
SRSF3-201ENST00000339436 LINC00336Q6ZUF6 198 aa8.7□□□□□ -1.02
SRSF3-201ENST00000339436 IMMP2LQ96T52 175 aa8.7□□□□□ -1.02
SRSF3-201ENST00000339436 TRBV6-5A0A0K0K1A5 114 aa8.69□□□□□ -1.02
SRSF3-201ENST00000339436 IGHV3-30P01768 117 aa8.69□□□□□ -1.02
SRSF3-201ENST00000339436 IGHV3-33P01772 117 aa8.69□□□□□ -1.02
SRSF3-201ENST00000339436 IGHV3-30-3P0DP02 117 aa8.69□□□□□ -1.02
SRSF3-201ENST00000339436 IGHV3-30-5P0DP03 117 aa8.69□□□□□ -1.02
SRSF3-201ENST00000339436 RPS10P46783 165 aaKnown RBP8.69□□□□□ -1.02
SRSF3-201ENST00000339436 NIT1Q86X76 327 aa8.69□□□□□ -1.02
SRSF3-201ENST00000339436 TRBV25-1A0A075B6N4 114 aa8.68□□□□□ -1.02
SRSF3-201ENST00000339436 NCR2O95944 276 aa8.68□□□□□ -1.02
SRSF3-201ENST00000339436 RHEBQ15382 184 aa8.68□□□□□ -1.02
SRSF3-201ENST00000339436 IQCJQ1A5X6 159 aa8.68□□□□□ -1.02
SRSF3-201ENST00000339436 KCNIP4Q6PIL6 250 aa8.68□□□□□ -1.02
SRSF3-201ENST00000339436 BTF3L4Q96K17 158 aa8.68□□□□□ -1.02
SRSF3-201ENST00000339436 CHCHD7Q9BUK0 85 aa8.68□□□□□ -1.02
SRSF3-201ENST00000339436 IGHV1-24A0A0C4DH33 117 aa8.67□□□□□ -1.02
SRSF3-201ENST00000339436 C7orf77A4D0Y5 90 aa8.67□□□□□ -1.02
SRSF3-201ENST00000339436 SDHAF1A6NFY7 115 aa8.67□□□□□ -1.02
SRSF3-201ENST00000339436 SMKR1H3BMG3 65 aa8.67□□□□□ -1.02
SRSF3-201ENST00000339436 LAGE3Q14657 143 aa8.67□□□□□ -1.02
SRSF3-201ENST00000339436 MRPL51Q4U2R6 128 aaKnown RBP8.67□□□□□ -1.02
SRSF3-201ENST00000339436 Q6ZRN7 208 aaPredicted RBP8.67□□□□□ -1.02
SRSF3-201ENST00000339436 CLRN3Q8NCR9 226 aa8.67□□□□□ -1.02
SRSF3-201ENST00000339436 TMEM242Q9NWH2 141 aa8.67□□□□□ -1.02
SRSF3-201ENST00000339436 URGCP-MRPS24S4R325 110 aa8.67□□□□□ -1.02
SRSF3-201ENST00000339436 PRSS29PA6NIE9 313 aa8.66□□□□□ -1.02
SRSF3-201ENST00000339436 IBA57-AS1B1ANH7 110 aa8.66□□□□□ -1.02
SRSF3-201ENST00000339436 COTL1Q14019 142 aa8.66□□□□□ -1.02
SRSF3-201ENST00000339436 NDUFA5Q16718 116 aa8.66□□□□□ -1.02
SRSF3-201ENST00000339436 NRACQ8N912 160 aa8.66□□□□□ -1.02
SRSF3-201ENST00000339436 CHCHD5Q9BSY4 110 aa8.66□□□□□ -1.02
SRSF3-201ENST00000339436 TMEM70Q9BUB7 260 aa8.66□□□□□ -1.02
SRSF3-201ENST00000339436 ST20Q9HBF5 79 aa8.66□□□□□ -1.02
SRSF3-201ENST00000339436 TRAV9-1A0A075B6T8 112 aa8.65□□□□□ -1.02
SRSF3-201ENST00000339436 A0A087WX48 190 aa8.65□□□□□ -1.02
SRSF3-201ENST00000339436 PPP1R17O96001 155 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms