RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 PIK3CD-AS1Q5SR53 167 aa8.02□□□□□ -1.13
RTN3-201ENST00000338850 FAM159AQ6UWV7 190 aa8.02□□□□□ -1.13
RTN3-201ENST00000338850 C16orf95Q9H693 158 aa8.02□□□□□ -1.13
RTN3-201ENST00000338850 VPREB3Q9UKI3 123 aa8.02□□□□□ -1.13
RTN3-201ENST00000338850 ZNF256Q9Y2P7 627 aaPredicted RBP8.02□□□□□ -1.13
RTN3-201ENST00000338850 MUC4Q99102 2169 aa8.01□□□□□ -1.13
RTN3-201ENST00000338850 TRAV2A0A0B4J234 112 aa8.01□□□□□ -1.13
RTN3-201ENST00000338850 IGIPA6NJ69 53 aa8.01□□□□□ -1.13
RTN3-201ENST00000338850 G3V4G9 280 aa8.01□□□□□ -1.13
RTN3-201ENST00000338850 RNASE4P34096 147 aaKnown RBP8.01□□□□□ -1.13
RTN3-201ENST00000338850 HERVK_113P61574 105 aa8.01□□□□□ -1.13
RTN3-201ENST00000338850 C14orf178Q8N769 122 aaPredicted RBP8.01□□□□□ -1.13
RTN3-201ENST00000338850 SYT8Q8NBV8 401 aa8.01□□□□□ -1.13
RTN3-201ENST00000338850 KLK15Q9H2R5 256 aa8.01□□□□□ -1.13
RTN3-201ENST00000338850 SPANXB1Q9NS25 103 aaPredicted RBP8.01□□□□□ -1.13
RTN3-201ENST00000338850 A0A0J9YX75 114 aa8□□□□□ -1.13
RTN3-201ENST00000338850 C11orf86A6NJI1 115 aa8□□□□□ -1.13
RTN3-201ENST00000338850 IGLL5B9A064 214 aa8□□□□□ -1.13
RTN3-201ENST00000338850 F8W1H4 67 aa8□□□□□ -1.13
RTN3-201ENST00000338850 K7EQG2 157 aa8□□□□□ -1.13
RTN3-201ENST00000338850 ELANEP08246 267 aa8□□□□□ -1.13
RTN3-201ENST00000338850 CRYBA4P53673 196 aa8□□□□□ -1.13
RTN3-201ENST00000338850 COTL1Q14019 142 aa8□□□□□ -1.13
RTN3-201ENST00000338850 PMVKQ15126 192 aa8□□□□□ -1.13
RTN3-201ENST00000338850 RRN3P1Q2M238 152 aa8□□□□□ -1.13
RTN3-201ENST00000338850 C12orf74Q32Q52 190 aa8□□□□□ -1.13
RTN3-201ENST00000338850 Q6ZQT7 251 aa8□□□□□ -1.13
RTN3-201ENST00000338850 MAPKAPK5-AS1Q8N8E1 139 aa8□□□□□ -1.13
RTN3-201ENST00000338850 PTH2Q96A98 100 aa8□□□□□ -1.13
RTN3-201ENST00000338850 RPL39LQ96EH5 51 aaKnown RBP8□□□□□ -1.13
RTN3-201ENST00000338850 KIR2DL4Q99706 377 aa8□□□□□ -1.13
RTN3-201ENST00000338850 VPS25Q9BRG1 176 aa8□□□□□ -1.13
RTN3-201ENST00000338850 CSTL1Q9H114 145 aa8□□□□□ -1.13
RTN3-201ENST00000338850 IGHV3-16A0A0C4DH30 117 aa7.99□□□□□ -1.13
RTN3-201ENST00000338850 PRSS29PA6NIE9 313 aa7.99□□□□□ -1.13
RTN3-201ENST00000338850 MGPP08493 103 aa7.99□□□□□ -1.13
RTN3-201ENST00000338850 SNRPD3P62318 126 aaKnown RBP7.99□□□□□ -1.13
RTN3-201ENST00000338850 LY6EQ16553 131 aa7.99□□□□□ -1.13
RTN3-201ENST00000338850 LYRM7Q5U5X0 104 aa7.99□□□□□ -1.13
RTN3-201ENST00000338850 ZFP2Q6ZN57 461 aa7.99□□□□□ -1.13
RTN3-201ENST00000338850 FOXI2Q6ZQN5 318 aa7.99□□□□□ -1.13
RTN3-201ENST00000338850 NFE4Q86UQ8 179 aa7.99□□□□□ -1.13
RTN3-201ENST00000338850 ZNF479Q96JC4 524 aa7.99□□□□□ -1.13
RTN3-201ENST00000338850 NHP2Q9NX24 153 aaKnown RBP7.99□□□□□ -1.13
RTN3-201ENST00000338850 LINC00527Q9UJ94 153 aa7.99□□□□□ -1.13
RTN3-201ENST00000338850 CMYA5Q8N3K9 4069 aa7.99□□□□□ -1.13
RTN3-201ENST00000338850 AGRNO00468 2067 aa7.98□□□□□ -1.13
RTN3-201ENST00000338850 TRGV11A0A075B6L2 103 aa7.98□□□□□ -1.13
RTN3-201ENST00000338850 IGHV3-11P01762 117 aa7.98□□□□□ -1.13
RTN3-201ENST00000338850 LGALS1P09382 135 aaKnown RBP7.98□□□□□ -1.13
RTN3-201ENST00000338850 UBE2D1P51668 147 aa7.98□□□□□ -1.13
RTN3-201ENST00000338850 BLCAPP62952 87 aa7.98□□□□□ -1.13
RTN3-201ENST00000338850 SUMO4Q6EEV6 95 aa7.98□□□□□ -1.13
RTN3-201ENST00000338850 LCNL1Q6ZST4 164 aa7.98□□□□□ -1.13
RTN3-201ENST00000338850 RAB37Q96AX2 223 aa7.98□□□□□ -1.13
RTN3-201ENST00000338850 HIST1H4GQ99525 98 aa7.98□□□□□ -1.13
RTN3-201ENST00000338850 PRADC1Q9BSG0 188 aa7.98□□□□□ -1.13
RTN3-201ENST00000338850 IGLV4-69A0A075B6H9 119 aa7.97□□□□□ -1.13
RTN3-201ENST00000338850 J3QR89 54 aa7.97□□□□□ -1.13
RTN3-201ENST00000338850 GNRH2O43555 120 aa7.97□□□□□ -1.13
RTN3-201ENST00000338850 CRYGDP07320 174 aa7.97□□□□□ -1.13
RTN3-201ENST00000338850 ZNF876PQ49A33 203 aa7.97□□□□□ -1.13
RTN3-201ENST00000338850 TRPT1Q86TN4 253 aaKnown RBP7.97□□□□□ -1.13
RTN3-201ENST00000338850 TTTY13Q9BZ97 58 aa7.97□□□□□ -1.13
RTN3-201ENST00000338850 IGHV1OR15-1A0A075B7D0 117 aa7.96□□□□□ -1.14
RTN3-201ENST00000338850 F6UB75 175 aa7.96□□□□□ -1.14
RTN3-201ENST00000338850 TSHBP01222 138 aa7.96□□□□□ -1.14
RTN3-201ENST00000338850 RPL11P62913 178 aaKnown RBP7.96□□□□□ -1.14
RTN3-201ENST00000338850 RNF151Q2KHN1 245 aa7.96□□□□□ -1.14
RTN3-201ENST00000338850 ATP6V0E2Q8NHE4 81 aa7.96□□□□□ -1.14
RTN3-201ENST00000338850 UBE2E2Q96LR5 201 aa7.96□□□□□ -1.14
RTN3-201ENST00000338850 LINC00467Q9BRT7 94 aa7.96□□□□□ -1.14
RTN3-201ENST00000338850 TP53TG1Q9Y2A0 90 aa7.96□□□□□ -1.14
RTN3-201ENST00000338850 SDHAF1A6NFY7 115 aa7.95□□□□□ -1.14
RTN3-201ENST00000338850 ZNF815PA8K554 130 aa7.95□□□□□ -1.14
RTN3-201ENST00000338850 M0QY20 66 aa7.95□□□□□ -1.14
RTN3-201ENST00000338850 CD7P09564 240 aa7.95□□□□□ -1.14
RTN3-201ENST00000338850 SCGB1A1P11684 91 aa7.95□□□□□ -1.14
RTN3-201ENST00000338850 SPAG8Q99932 426 aaPredicted RBP7.95□□□□□ -1.14
RTN3-201ENST00000338850 MDFICQ9P1T7 246 aa7.95□□□□□ -1.14
RTN3-201ENST00000338850 PRKDCP78527 4128 aaKnown RBP7.94□□□□□ -1.14
RTN3-201ENST00000338850 TCTAP57738 103 aa7.94□□□□□ -1.14
RTN3-201ENST00000338850 HIST2H2BDQ6DRA6 164 aa7.94□□□□□ -1.14
RTN3-201ENST00000338850 AMTNQ6UX39 209 aa7.94□□□□□ -1.14
RTN3-201ENST00000338850 Q6ZS46 218 aa7.94□□□□□ -1.14
RTN3-201ENST00000338850 Q8N2B8 174 aa7.94□□□□□ -1.14
RTN3-201ENST00000338850 CLUHP3Q96NS8 147 aa7.94□□□□□ -1.14
RTN3-201ENST00000338850 PYGO1Q9Y3Y4 419 aa7.94□□□□□ -1.14
RTN3-201ENST00000338850 A0A0J9YY99 117 aa7.93□□□□□ -1.14
RTN3-201ENST00000338850 J3KRW8 73 aa7.93□□□□□ -1.14
RTN3-201ENST00000338850 K7ERJ3 54 aa7.93□□□□□ -1.14
RTN3-201ENST00000338850 M0QXV9 152 aa7.93□□□□□ -1.14
RTN3-201ENST00000338850 SAP30O75446 220 aa7.93□□□□□ -1.14
RTN3-201ENST00000338850 UBE2D3P61077 147 aa7.93□□□□□ -1.14
RTN3-201ENST00000338850 UBE2D2P62837 147 aa7.93□□□□□ -1.14
RTN3-201ENST00000338850 MORN3Q6PF18 240 aaPredicted RBP7.93□□□□□ -1.14
RTN3-201ENST00000338850 PRO0461Q9UI25 63 aa7.93□□□□□ -1.14
RTN3-201ENST00000338850 TRAV12-3A0A0B4J271 114 aa7.92□□□□□ -1.14
RTN3-201ENST00000338850 I3L3M4 83 aa7.92□□□□□ -1.14
RTN3-201ENST00000338850 DEFB1P60022 68 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms