RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 VAX2Q9UIW0 290 aa7.31□□□□□ -1.24
CSMD2-202ENST00000338325 IGHV3-64A0A075B6Q5 118 aa7.3□□□□□ -1.24
CSMD2-202ENST00000338325 TRBV6-1A0A0K0K1D8 114 aa7.3□□□□□ -1.24
CSMD2-202ENST00000338325 hDV102S1A0JD36 115 aa7.3□□□□□ -1.24
CSMD2-202ENST00000338325 LTAP01374 205 aa7.3□□□□□ -1.24
CSMD2-202ENST00000338325 DPH3P1Q9H4G8 78 aa7.3□□□□□ -1.24
CSMD2-202ENST00000338325 hCG_2014768A0A024R1R8 64 aa7.29□□□□□ -1.24
CSMD2-202ENST00000338325 TRBV25-1A0A075B6N4 114 aa7.29□□□□□ -1.24
CSMD2-202ENST00000338325 A0A087WYN8 130 aa7.29□□□□□ -1.24
CSMD2-202ENST00000338325 CHTF8P0CG12 524 aa7.29□□□□□ -1.24
CSMD2-202ENST00000338325 OR10AG1Q8NH19 301 aa7.29□□□□□ -1.24
CSMD2-202ENST00000338325 DPH3Q96FX2 82 aa7.29□□□□□ -1.24
CSMD2-202ENST00000338325 DERL1Q9BUN8 251 aa7.29□□□□□ -1.24
CSMD2-202ENST00000338325 ZNF471Q9BX82 626 aaPredicted RBP7.29□□□□□ -1.24
CSMD2-202ENST00000338325 IGLV10-54A0A075B6I4 117 aa7.28□□□□□ -1.24
CSMD2-202ENST00000338325 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.28□□□□□ -1.24
CSMD2-202ENST00000338325 F5H697 171 aa7.28□□□□□ -1.24
CSMD2-202ENST00000338325 DEFA1P59665 94 aa7.28□□□□□ -1.24
CSMD2-202ENST00000338325 DEFA3P59666 94 aa7.28□□□□□ -1.24
CSMD2-202ENST00000338325 REG3AQ06141 175 aa7.28□□□□□ -1.24
CSMD2-202ENST00000338325 SPACA4Q8TDM5 124 aa7.28□□□□□ -1.24
CSMD2-202ENST00000338325 AP5S1Q9NUS5 200 aa7.28□□□□□ -1.24
CSMD2-202ENST00000338325 PHOX2AO14813 284 aa7.27□□□□□ -1.25
CSMD2-202ENST00000338325 CXCL1P09341 107 aa7.27□□□□□ -1.25
CSMD2-202ENST00000338325 RGS21Q2M5E4 152 aa7.27□□□□□ -1.25
CSMD2-202ENST00000338325 RPL7L1Q6DKI1 246 aaKnown RBP7.27□□□□□ -1.25
CSMD2-202ENST00000338325 C7orf33Q8WU49 177 aa7.27□□□□□ -1.25
CSMD2-202ENST00000338325 TCEAL7Q9BRU2 100 aa7.27□□□□□ -1.25
CSMD2-202ENST00000338325 BORCS7-ASMTA0A0B4J1R7 106 aa7.27□□□□□ -1.25
CSMD2-202ENST00000338325 TRAV8-4A0A0B4J246 113 aa7.27□□□□□ -1.25
CSMD2-202ENST00000338325 IGHV1-24A0A0C4DH33 117 aa7.27□□□□□ -1.25
CSMD2-202ENST00000338325 SNAI2O43623 268 aa7.27□□□□□ -1.25
CSMD2-202ENST00000338325 P01737 135 aa7.27□□□□□ -1.25
CSMD2-202ENST00000338325 AKR1C3P42330 323 aa7.27□□□□□ -1.25
CSMD2-202ENST00000338325 IQCJQ1A5X6 159 aa7.27□□□□□ -1.25
CSMD2-202ENST00000338325 LINC01600Q96MT4 127 aa7.27□□□□□ -1.25
CSMD2-202ENST00000338325 PLAC8Q9NZF1 115 aa7.27□□□□□ -1.25
CSMD2-202ENST00000338325 ALG5Q9Y673 324 aa7.27□□□□□ -1.25
CSMD2-202ENST00000338325 MAP1LC3B2A6NCE7 125 aa7.26□□□□□ -1.25
CSMD2-202ENST00000338325 SLPIP03973 132 aa7.26□□□□□ -1.25
CSMD2-202ENST00000338325 OR5AL1P0C617 328 aa7.26□□□□□ -1.25
CSMD2-202ENST00000338325 FHITP49789 147 aa7.26□□□□□ -1.25
CSMD2-202ENST00000338325 AKR1C8PQ5T2L2 129 aa7.26□□□□□ -1.25
CSMD2-202ENST00000338325 SPANXN1Q5VSR9 72 aa7.26□□□□□ -1.25
CSMD2-202ENST00000338325 SSBP4Q9BWG4 385 aaPredicted RBP7.26□□□□□ -1.25
CSMD2-202ENST00000338325 MAP1LC3BQ9GZQ8 125 aa7.26□□□□□ -1.25
CSMD2-202ENST00000338325 KIF25-AS1Q9Y6Z4 181 aa7.26□□□□□ -1.25
CSMD2-202ENST00000338325 MUC21A0A0G2JKD1 596 aa7.25□□□□□ -1.25
CSMD2-202ENST00000338325 MUC21A0A140T8X8 626 aa7.25□□□□□ -1.25
CSMD2-202ENST00000338325 SMIM17P0DL12 118 aa7.25□□□□□ -1.25
CSMD2-202ENST00000338325 GZMBP10144 247 aa7.25□□□□□ -1.25
CSMD2-202ENST00000338325 CST9LP1Q5W188 147 aa7.25□□□□□ -1.25
CSMD2-202ENST00000338325 C20orf203Q8NBC4 194 aa7.25□□□□□ -1.25
CSMD2-202ENST00000338325 INO80EQ8NBZ0 244 aaPredicted RBP7.25□□□□□ -1.25
CSMD2-202ENST00000338325 STOML3Q8TAV4 291 aa7.25□□□□□ -1.25
CSMD2-202ENST00000338325 AP1S3Q96PC3 154 aa7.25□□□□□ -1.25
CSMD2-202ENST00000338325 ATP6V1G1O75348 118 aa7.24□□□□□ -1.25
CSMD2-202ENST00000338325 IGLV4-60A0A075B6I1 120 aa7.23□□□□□ -1.25
CSMD2-202ENST00000338325 A0A1B0GUV1 79 aa7.23□□□□□ -1.25
CSMD2-202ENST00000338325 SSTP61278 116 aa7.23□□□□□ -1.25
CSMD2-202ENST00000338325 PRR3P79522 188 aaKnown RBP7.23□□□□□ -1.25
CSMD2-202ENST00000338325 ODF1Q14990 250 aa7.23□□□□□ -1.25
CSMD2-202ENST00000338325 Q5BKY6 102 aa7.23□□□□□ -1.25
CSMD2-202ENST00000338325 GFRA4Q9GZZ7 299 aa7.23□□□□□ -1.25
CSMD2-202ENST00000338325 S100A9P06702 114 aaKnown RBP7.22□□□□□ -1.25
CSMD2-202ENST00000338325 RAB5CP51148 216 aa7.22□□□□□ -1.25
CSMD2-202ENST00000338325 WDR73Q6P4I2 378 aa7.22□□□□□ -1.25
CSMD2-202ENST00000338325 TMEM243Q9BU79 118 aa7.22□□□□□ -1.25
CSMD2-202ENST00000338325 MLST8Q9BVC4 326 aa7.22□□□□□ -1.25
CSMD2-202ENST00000338325 MED28Q9H204 178 aa7.22□□□□□ -1.25
CSMD2-202ENST00000338325 FXYD6-FXYD2A0A087WZ82 144 aa7.22□□□□□ -1.25
CSMD2-202ENST00000338325 H7C1H1 209 aa7.22□□□□□ -1.25
CSMD2-202ENST00000338325 M0QY20 66 aa7.22□□□□□ -1.25
CSMD2-202ENST00000338325 MGPP08493 103 aa7.22□□□□□ -1.25
CSMD2-202ENST00000338325 COX6A2Q02221 97 aa7.22□□□□□ -1.25
CSMD2-202ENST00000338325 C15orf56Q8N910 161 aa7.22□□□□□ -1.25
CSMD2-202ENST00000338325 GTSF1Q8WW33 167 aa7.22□□□□□ -1.25
CSMD2-202ENST00000338325 A0A0J9YXV3 536 aa7.21□□□□□ -1.26
CSMD2-202ENST00000338325 SCO2A0A1W2PP80 73 aa7.21□□□□□ -1.26
CSMD2-202ENST00000338325 PAGE4O60829 102 aa7.21□□□□□ -1.26
CSMD2-202ENST00000338325 NDUFS6O75380 124 aaKnown RBP7.21□□□□□ -1.26
CSMD2-202ENST00000338325 GIPP09681 153 aaPredicted RBP7.21□□□□□ -1.26
CSMD2-202ENST00000338325 MAJINQ3KP22 176 aa7.21□□□□□ -1.26
CSMD2-202ENST00000338325 BAGE2Q86Y30 109 aa7.21□□□□□ -1.26
CSMD2-202ENST00000338325 IGKV2-24A0A0C4DH68 120 aa7.2□□□□□ -1.26
CSMD2-202ENST00000338325 RPS10P46783 165 aaKnown RBP7.2□□□□□ -1.26
CSMD2-202ENST00000338325 SULT1A2P50226 295 aa7.2□□□□□ -1.26
CSMD2-202ENST00000338325 NKX2-5P52952 324 aaPredicted RBP7.2□□□□□ -1.26
CSMD2-202ENST00000338325 SUMO4Q6EEV6 95 aa7.2□□□□□ -1.26
CSMD2-202ENST00000338325 CFAP161Q6P656 301 aa7.2□□□□□ -1.26
CSMD2-202ENST00000338325 PRSS3P2Q8NHM4 247 aa7.2□□□□□ -1.26
CSMD2-202ENST00000338325 GAGE12HA6NDE8 117 aa7.19□□□□□ -1.26
CSMD2-202ENST00000338325 UBE2L6O14933 153 aa7.19□□□□□ -1.26
CSMD2-202ENST00000338325 KRTAP10-8P60410 259 aa7.19□□□□□ -1.26
CSMD2-202ENST00000338325 REG3GQ6UW15 175 aa7.19□□□□□ -1.26
CSMD2-202ENST00000338325 STPG4Q8N801 248 aa7.19□□□□□ -1.26
CSMD2-202ENST00000338325 PGLYRP4Q96LB8 373 aa7.19□□□□□ -1.26
CSMD2-202ENST00000338325 HIGD2BQ4VC39 106 aa7.18□□□□□ -1.26
CSMD2-202ENST00000338325 RASL11AQ6T310 242 aa7.18□□□□□ -1.26
CSMD2-202ENST00000338325 SPINK6Q6UWN8 80 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms