RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 CRYBA2P53672 197 aa4.7□□□□□ -1.66
CDC42BPA-201ENST00000334218 SAP25Q8TEE9 199 aa4.7□□□□□ -1.66
CDC42BPA-201ENST00000334218 TP53AIP1Q9HCN2 124 aa4.7□□□□□ -1.66
CDC42BPA-201ENST00000334218 Q9UF83 564 aa4.7□□□□□ -1.66
CDC42BPA-201ENST00000334218 LTBP1Q14766 1721 aa4.69□□□□□ -1.66
CDC42BPA-201ENST00000334218 SIP14410 1827 aa4.69□□□□□ -1.66
CDC42BPA-201ENST00000334218 IGKV3-7A0A075B6H7 116 aa4.69□□□□□ -1.66
CDC42BPA-201ENST00000334218 LYPD3O95274 346 aa4.69□□□□□ -1.66
CDC42BPA-201ENST00000334218 Q6ZRM9 215 aa4.69□□□□□ -1.66
CDC42BPA-201ENST00000334218 LINC00312Q9Y6C7 94 aa4.69□□□□□ -1.66
CDC42BPA-201ENST00000334218 MED14OSP0DP75 135 aa4.69□□□□□ -1.66
CDC42BPA-201ENST00000334218 ADAMTSL1Q8N6G6 1762 aa4.68□□□□□ -1.66
CDC42BPA-201ENST00000334218 IGLV3-16A0A075B6K0 115 aa4.68□□□□□ -1.66
CDC42BPA-201ENST00000334218 A0A1B0GU69 56 aa4.68□□□□□ -1.66
CDC42BPA-201ENST00000334218 COX7BP24311 80 aa4.68□□□□□ -1.66
CDC42BPA-201ENST00000334218 IGFBP6P24592 240 aaPredicted RBP4.68□□□□□ -1.66
CDC42BPA-201ENST00000334218 C14orf178Q8N769 122 aaPredicted RBP4.68□□□□□ -1.66
CDC42BPA-201ENST00000334218 TMEM263Q8WUH6 116 aaKnown RBP4.68□□□□□ -1.66
CDC42BPA-201ENST00000334218 COX6B1P14854 86 aa4.68□□□□□ -1.66
CDC42BPA-201ENST00000334218 IGHV3OR16-9A0A0B4J2B5 98 aa4.68□□□□□ -1.66
CDC42BPA-201ENST00000334218 ZNF497Q6ZNH5 498 aa4.68□□□□□ -1.66
CDC42BPA-201ENST00000334218 FAM223BA6NKX1 122 aa4.68□□□□□ -1.66
CDC42BPA-201ENST00000334218 PATE3B3GLJ2 98 aa4.68□□□□□ -1.66
CDC42BPA-201ENST00000334218 Q0VFX4 171 aa4.68□□□□□ -1.66
CDC42BPA-201ENST00000334218 FAM223AQ8IWN6 122 aa4.68□□□□□ -1.66
CDC42BPA-201ENST00000334218 PRB2P02812 416 aaPredicted RBP4.67□□□□□ -1.66
CDC42BPA-201ENST00000334218 TRGV3P03979 118 aa4.67□□□□□ -1.66
CDC42BPA-201ENST00000334218 MYCNOSP40205 109 aa4.67□□□□□ -1.66
CDC42BPA-201ENST00000334218 TPSG1Q9NRR2 321 aa4.67□□□□□ -1.66
CDC42BPA-201ENST00000334218 H7C423 109 aa4.67□□□□□ -1.66
CDC42BPA-201ENST00000334218 TM2D3Q9BRN9 247 aa4.67□□□□□ -1.66
CDC42BPA-201ENST00000334218 A0A1B0GXF2 115 aa4.67□□□□□ -1.66
CDC42BPA-201ENST00000334218 IGLV7-43P04211 117 aa4.67□□□□□ -1.66
CDC42BPA-201ENST00000334218 CCL17Q92583 94 aa4.67□□□□□ -1.66
CDC42BPA-201ENST00000334218 PAQR4Q8N4S7 273 aaPredicted RBP4.67□□□□□ -1.66
CDC42BPA-201ENST00000334218 HHLA3Q9XRX5 114 aa4.67□□□□□ -1.66
CDC42BPA-201ENST00000334218 ACYP2P14621 99 aa4.67□□□□□ -1.66
CDC42BPA-201ENST00000334218 CTRLP40313 264 aa4.67□□□□□ -1.66
CDC42BPA-201ENST00000334218 H0Y9P7 68 aa4.67□□□□□ -1.66
CDC42BPA-201ENST00000334218 IGHV1-2P23083 117 aa4.67□□□□□ -1.66
CDC42BPA-201ENST00000334218 SPRR3Q9UBC9 169 aa4.67□□□□□ -1.66
CDC42BPA-201ENST00000334218 IGHV7-4-1A0A0J9YVY3 117 aa4.67□□□□□ -1.66
CDC42BPA-201ENST00000334218 KIAA0040Q15053 153 aa4.67□□□□□ -1.66
CDC42BPA-201ENST00000334218 ZNF462Q96JM2 2506 aa4.67□□□□□ -1.66
CDC42BPA-201ENST00000334218 IGHV3-33P01772 117 aa4.67□□□□□ -1.66
CDC42BPA-201ENST00000334218 IGHV3-74A0A0B4J1X5 117 aa4.66□□□□□ -1.66
CDC42BPA-201ENST00000334218 A0A0J9YX75 114 aa4.66□□□□□ -1.66
CDC42BPA-201ENST00000334218 PMS2P5A8MQ11 134 aa4.66□□□□□ -1.66
CDC42BPA-201ENST00000334218 CRIPTQ9P021 101 aa4.66□□□□□ -1.66
CDC42BPA-201ENST00000334218 TRBV6-1A0A0K0K1D8 114 aa4.66□□□□□ -1.66
CDC42BPA-201ENST00000334218 GRNP28799 593 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-201ENST00000334218 IGHV3OR16-12A0A075B7B8 117 aa4.66□□□□□ -1.66
CDC42BPA-201ENST00000334218 IGHV3-15A0A0B4J1V0 119 aa4.66□□□□□ -1.66
CDC42BPA-201ENST00000334218 K7EM74 188 aa4.66□□□□□ -1.66
CDC42BPA-201ENST00000334218 RPS27P42677 84 aaKnown RBP4.65□□□□□ -1.66
CDC42BPA-201ENST00000334218 IL17DQ8TAD2 202 aa4.65□□□□□ -1.66
CDC42BPA-201ENST00000334218 MRPS12O15235 138 aaKnown RBP4.65□□□□□ -1.66
CDC42BPA-201ENST00000334218 Q9BRP9 147 aa4.65□□□□□ -1.66
CDC42BPA-201ENST00000334218 TDRG1Q3Y452 100 aa4.65□□□□□ -1.66
CDC42BPA-201ENST00000334218 PIP4P1Q86T03 277 aa4.65□□□□□ -1.66
CDC42BPA-201ENST00000334218 IGHV3-48P01763 117 aa4.65□□□□□ -1.67
CDC42BPA-201ENST00000334218 DHRS4-AS1Q9P1J3 65 aa4.65□□□□□ -1.67
CDC42BPA-201ENST00000334218 IGHV3-64DA0A0J9YX35 117 aa4.65□□□□□ -1.67
CDC42BPA-201ENST00000334218 SMIM1B2RUZ4 78 aa4.65□□□□□ -1.67
CDC42BPA-201ENST00000334218 TFF1P04155 84 aa4.65□□□□□ -1.67
CDC42BPA-201ENST00000334218 C2CD3Q4AC94 2353 aa4.65□□□□□ -1.67
CDC42BPA-201ENST00000334218 ASB16-AS1Q495Z4 193 aa4.65□□□□□ -1.67
CDC42BPA-201ENST00000334218 SBSPONQ8IVN8 264 aa4.65□□□□□ -1.67
CDC42BPA-201ENST00000334218 ZNF71Q9NQZ8 489 aaPredicted RBP4.65□□□□□ -1.67
CDC42BPA-201ENST00000334218 CELA3BP08861 270 aa4.65□□□□□ -1.67
CDC42BPA-201ENST00000334218 RNASE3P12724 160 aaKnown RBP4.64□□□□□ -1.67
CDC42BPA-201ENST00000334218 DMAC1Q96GE9 116 aa4.64□□□□□ -1.67
CDC42BPA-201ENST00000334218 TRBV6-8A0A0A6YYG3 113 aa4.64□□□□□ -1.67
CDC42BPA-201ENST00000334218 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.64□□□□□ -1.67
CDC42BPA-201ENST00000334218 RNASE13Q5GAN3 156 aaKnown RBP4.64□□□□□ -1.67
CDC42BPA-201ENST00000334218 C5orf56Q8N8D9 126 aa4.64□□□□□ -1.67
CDC42BPA-201ENST00000334218 IGKV2D-26A0A0A0MRZ7 120 aa4.64□□□□□ -1.67
CDC42BPA-201ENST00000334218 IBA57-AS1B1ANH7 110 aa4.64□□□□□ -1.67
CDC42BPA-201ENST00000334218 LINC00336Q6ZUF6 198 aa4.64□□□□□ -1.67
CDC42BPA-201ENST00000334218 LINC00173Q6ZV60 143 aa4.64□□□□□ -1.67
CDC42BPA-201ENST00000334218 IGHV4OR15-8A0A075B7B6 117 aa4.63□□□□□ -1.67
CDC42BPA-201ENST00000334218 A0A087WW49 117 aa4.63□□□□□ -1.67
CDC42BPA-201ENST00000334218 EXOC3-AS1Q8N2X6 119 aa4.63□□□□□ -1.67
CDC42BPA-201ENST00000334218 PRB3Q04118 309 aaPredicted RBP4.63□□□□□ -1.67
CDC42BPA-201ENST00000334218 KIAA0087Q14695 138 aa4.63□□□□□ -1.67
CDC42BPA-201ENST00000334218 IGHV4-4A0A075B6R2 117 aa4.63□□□□□ -1.67
CDC42BPA-201ENST00000334218 FAM27E3Q08E93 113 aa4.63□□□□□ -1.67
CDC42BPA-201ENST00000334218 C19orf84I3L1E1 186 aa4.63□□□□□ -1.67
CDC42BPA-201ENST00000334218 IGHV3-21A0A0B4J1V1 117 aa4.63□□□□□ -1.67
CDC42BPA-201ENST00000334218 IGHV4-28A0A0C4DH34 117 aa4.63□□□□□ -1.67
CDC42BPA-201ENST00000334218 IGHV3-11P01762 117 aa4.63□□□□□ -1.67
CDC42BPA-201ENST00000334218 PIN1P1O15428 100 aa4.62□□□□□ -1.67
CDC42BPA-201ENST00000334218 ZNF80P51504 273 aaPredicted RBP4.62□□□□□ -1.67
CDC42BPA-201ENST00000334218 NDUFA1O15239 70 aa4.62□□□□□ -1.67
CDC42BPA-201ENST00000334218 C3orf84H3BNL1 204 aa4.62□□□□□ -1.67
CDC42BPA-201ENST00000334218 TRGV1A0A0A0MS02 117 aa4.62□□□□□ -1.67
CDC42BPA-201ENST00000334218 C11orf53Q8IXP5 236 aa4.62□□□□□ -1.67
CDC42BPA-201ENST00000334218 GPHA2Q96T91 129 aa4.62□□□□□ -1.67
CDC42BPA-201ENST00000334218 C2orf70A6NJV1 201 aa4.62□□□□□ -1.67
CDC42BPA-201ENST00000334218 NDPQ00604 133 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms