RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 CXCL1P09341 107 aa16.23■□□□□ 0.19
PPP4R4-202ENST00000328839 MIAQ16674 131 aa16.23■□□□□ 0.19
PPP4R4-202ENST00000328839 BAGE2Q86Y30 109 aa16.23■□□□□ 0.19
PPP4R4-202ENST00000328839 FAM213BQ8TBF2 198 aa16.23■□□□□ 0.19
PPP4R4-202ENST00000328839 SNAI2O43623 268 aa16.22■□□□□ 0.19
PPP4R4-202ENST00000328839 RPL37AP61513 92 aaKnown RBP16.22■□□□□ 0.19
PPP4R4-202ENST00000328839 SMIM17P0DL12 118 aa16.21■□□□□ 0.19
PPP4R4-202ENST00000328839 SMLR1H3BR10 107 aa16.2■□□□□ 0.18
PPP4R4-202ENST00000328839 PRSS1P07477 247 aa16.2■□□□□ 0.18
PPP4R4-202ENST00000328839 OR5AL1P0C617 328 aa16.2■□□□□ 0.18
PPP4R4-202ENST00000328839 GAGE6Q13070 117 aa16.2■□□□□ 0.18
PPP4R4-202ENST00000328839 TMEM97Q5BJF2 176 aa16.2■□□□□ 0.18
PPP4R4-202ENST00000328839 DERL1Q9BUN8 251 aa16.2■□□□□ 0.18
PPP4R4-202ENST00000328839 MLST8Q9BVC4 326 aa16.2■□□□□ 0.18
PPP4R4-202ENST00000328839 NTM-AS1Q6ZSK4 140 aa16.19■□□□□ 0.18
PPP4R4-202ENST00000328839 SSBP4Q9BWG4 385 aaPredicted RBP16.19■□□□□ 0.18
PPP4R4-202ENST00000328839 RBX1P62877 108 aa16.18■□□□□ 0.18
PPP4R4-202ENST00000328839 LINC00269Q8N2A0 174 aa16.18■□□□□ 0.18
PPP4R4-202ENST00000328839 MBD3L1Q8WWY6 194 aa16.18■□□□□ 0.18
PPP4R4-202ENST00000328839 AP1S3Q96PC3 154 aa16.18■□□□□ 0.18
PPP4R4-202ENST00000328839 TRBV25-1A0A075B6N4 114 aa16.17■□□□□ 0.18
PPP4R4-202ENST00000328839 VAX2Q9UIW0 290 aa16.17■□□□□ 0.18
PPP4R4-202ENST00000328839 UMAD1C9J7I0 102 aa16.16■□□□□ 0.18
PPP4R4-202ENST00000328839 DGAT2L7PQ6IED9 249 aa16.16■□□□□ 0.18
PPP4R4-202ENST00000328839 KCNRGQ8N5I3 272 aa16.16■□□□□ 0.18
PPP4R4-202ENST00000328839 PRR34Q9NV39 138 aa16.16■□□□□ 0.18
PPP4R4-202ENST00000328839 FAT3Q8TDW7 4589 aa16.16■□□□□ 0.18
PPP4R4-202ENST00000328839 MGPP08493 103 aa16.15■□□□□ 0.18
PPP4R4-202ENST00000328839 TMUB2Q71RG4 321 aa16.15■□□□□ 0.18
PPP4R4-202ENST00000328839 TPPP3Q9BW30 176 aa16.15■□□□□ 0.18
PPP4R4-202ENST00000328839 KIF25-AS1Q9Y6Z4 181 aa16.15■□□□□ 0.18
PPP4R4-202ENST00000328839 C9orf163Q8N9P6 203 aa16.14■□□□□ 0.17
PPP4R4-202ENST00000328839 H2AFB1P0C5Y9 115 aa16.13■□□□□ 0.17
PPP4R4-202ENST00000328839 ZNF345Q14585 488 aa16.13■□□□□ 0.17
PPP4R4-202ENST00000328839 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.13■□□□□ 0.17
PPP4R4-202ENST00000328839 IGLV10-54A0A075B6I4 117 aa16.12■□□□□ 0.17
PPP4R4-202ENST00000328839 IGHV1-24A0A0C4DH33 117 aa16.12■□□□□ 0.17
PPP4R4-202ENST00000328839 RPL35P42766 123 aaKnown RBP16.12■□□□□ 0.17
PPP4R4-202ENST00000328839 RGS21Q2M5E4 152 aa16.12■□□□□ 0.17
PPP4R4-202ENST00000328839 PLA2G2DQ9UNK4 145 aa16.12■□□□□ 0.17
PPP4R4-202ENST00000328839 HMCN2Q8NDA2 5059 aa16.12■□□□□ 0.17
PPP4R4-202ENST00000328839 PKHD1L1Q86WI1 4243 aa16.12■□□□□ 0.17
PPP4R4-202ENST00000328839 GZMBP10144 247 aa16.11■□□□□ 0.17
PPP4R4-202ENST00000328839 HNRNPA3P51991 378 aaKnown RBP16.11■□□□□ 0.17
PPP4R4-202ENST00000328839 REG3AQ06141 175 aa16.11■□□□□ 0.17
PPP4R4-202ENST00000328839 IQCJQ1A5X6 159 aa16.11■□□□□ 0.17
PPP4R4-202ENST00000328839 KRTAP26-1Q6PEX3 210 aa16.11■□□□□ 0.17
PPP4R4-202ENST00000328839 DAZAP1Q96EP5 407 aaKnown RBP16.1■□□□□ 0.17
PPP4R4-202ENST00000328839 KANTRA0A1W2PQU2 76 aa16.09■□□□□ 0.17
PPP4R4-202ENST00000328839 H7C1H1 209 aa16.09■□□□□ 0.17
PPP4R4-202ENST00000328839 PANO1I0J062 215 aa16.08■□□□□ 0.16
PPP4R4-202ENST00000328839 M0QY20 66 aa16.08■□□□□ 0.16
PPP4R4-202ENST00000328839 SUMO4Q6EEV6 95 aa16.08■□□□□ 0.16
PPP4R4-202ENST00000328839 FER1L6-AS1Q8NA97 138 aa16.08■□□□□ 0.16
PPP4R4-202ENST00000328839 CLRN3Q8NCR9 226 aa16.08■□□□□ 0.16
PPP4R4-202ENST00000328839 hDV102S1A0JD36 115 aa16.07■□□□□ 0.16
PPP4R4-202ENST00000328839 BCL2L11O43521 198 aa16.07■□□□□ 0.16
PPP4R4-202ENST00000328839 OR2D3Q8NGH3 330 aa16.07■□□□□ 0.16
PPP4R4-202ENST00000328839 GNG13Q9P2W3 67 aa16.07■□□□□ 0.16
PPP4R4-202ENST00000328839 A0A0D9SG52 128 aa16.06■□□□□ 0.16
PPP4R4-202ENST00000328839 NKX2-5P52952 324 aaPredicted RBP16.06■□□□□ 0.16
PPP4R4-202ENST00000328839 CENPWQ5EE01 88 aa16.06■□□□□ 0.16
PPP4R4-202ENST00000328839 SDIM1Q6ZPB5 146 aa16.06■□□□□ 0.16
PPP4R4-202ENST00000328839 IGLC6P0CF74 106 aa16.05■□□□□ 0.16
PPP4R4-202ENST00000328839 RAB5CP51148 216 aa16.05■□□□□ 0.16
PPP4R4-202ENST00000328839 RPS20P60866 119 aaKnown RBP16.05■□□□□ 0.16
PPP4R4-202ENST00000328839 C20orf203Q8NBC4 194 aa16.05■□□□□ 0.16
PPP4R4-202ENST00000328839 TMEM243Q9BU79 118 aa16.05■□□□□ 0.16
PPP4R4-202ENST00000328839 MANBALQ9NQG1 85 aa16.05■□□□□ 0.16
PPP4R4-202ENST00000328839 CACNG7P62955 275 aa16.04■□□□□ 0.16
PPP4R4-202ENST00000328839 DPH3Q96FX2 82 aa16.04■□□□□ 0.16
PPP4R4-202ENST00000328839 HMSDA8MTL9 139 aa16.03■□□□□ 0.16
PPP4R4-202ENST00000328839 EIF5AP63241 154 aaKnown RBP16.03■□□□□ 0.16
PPP4R4-202ENST00000328839 CCL20P78556 96 aa16.03■□□□□ 0.16
PPP4R4-202ENST00000328839 C11orf52Q96A22 123 aa16.03■□□□□ 0.16
PPP4R4-202ENST00000328839 AP5S1Q9NUS5 200 aa16.03■□□□□ 0.16
PPP4R4-202ENST00000328839 IGLV4-60A0A075B6I1 120 aa16.02■□□□□ 0.16
PPP4R4-202ENST00000328839 TRAV8-4A0A0B4J246 113 aa16.02■□□□□ 0.16
PPP4R4-202ENST00000328839 P01737 135 aa16.02■□□□□ 0.16
PPP4R4-202ENST00000328839 CNBPP62633 177 aaKnown RBP16.02■□□□□ 0.16
PPP4R4-202ENST00000328839 RASL11AQ6T310 242 aa16.02■□□□□ 0.16
PPP4R4-202ENST00000328839 UBE2L6O14933 153 aa16.01■□□□□ 0.15
PPP4R4-202ENST00000328839 GFRA4Q9GZZ7 299 aa16.01■□□□□ 0.15
PPP4R4-202ENST00000328839 IGHV3-64A0A075B6Q5 118 aa16■□□□□ 0.15
PPP4R4-202ENST00000328839 TRAV16A0A0A6YYK6 109 aaPredicted RBP16■□□□□ 0.15
PPP4R4-202ENST00000328839 GNG4P50150 75 aa16■□□□□ 0.15
PPP4R4-202ENST00000328839 UBR4Q5T4S7 5183 aa15.99■□□□□ 0.15
PPP4R4-202ENST00000328839 A0A1B0GUV1 79 aa15.99■□□□□ 0.15
PPP4R4-202ENST00000328839 XKRY2A2RUG3 117 aa15.99■□□□□ 0.15
PPP4R4-202ENST00000328839 RAB19A4D1S5 217 aa15.99■□□□□ 0.15
PPP4R4-202ENST00000328839 C19orf71A6NCJ1 209 aa15.99■□□□□ 0.15
PPP4R4-202ENST00000328839 TRGC1P0CF51 173 aa15.99■□□□□ 0.15
PPP4R4-202ENST00000328839 WDR73Q6P4I2 378 aa15.98■□□□□ 0.15
PPP4R4-202ENST00000328839 LYZL1Q6UWQ5 148 aa15.98■□□□□ 0.15
PPP4R4-202ENST00000328839 DPH3P1Q9H4G8 78 aa15.98■□□□□ 0.15
PPP4R4-202ENST00000328839 NIT2Q9NQR4 276 aa15.98■□□□□ 0.15
PPP4R4-202ENST00000328839 F2Z2F3 143 aa15.97■□□□□ 0.15
PPP4R4-202ENST00000328839 IFNA1P01562 189 aa15.97■□□□□ 0.15
PPP4R4-202ENST00000328839 CHTF8P0CG12 524 aa15.97■□□□□ 0.15
PPP4R4-202ENST00000328839 AMTP48728 403 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms