RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 NDUFA1O15239 70 aa8.62□□□□□ -1.03
COL4A5-201ENST00000328300 SCRT2Q9NQ03 307 aa8.62□□□□□ -1.03
COL4A5-201ENST00000328300 SPATA25Q9BR10 227 aa8.62□□□□□ -1.03
COL4A5-201ENST00000328300 SPATA12Q7Z6I5 190 aa8.62□□□□□ -1.03
COL4A5-201ENST00000328300 CAMK2N2Q96S95 79 aa8.62□□□□□ -1.03
COL4A5-201ENST00000328300 MED13Q9UHV7 2174 aa8.62□□□□□ -1.03
COL4A5-201ENST00000328300 A0A096LPF7 62 aa8.62□□□□□ -1.03
COL4A5-201ENST00000328300 IGLV2-8P01709 118 aa8.62□□□□□ -1.03
COL4A5-201ENST00000328300 GATA1P15976 413 aaPredicted RBP8.62□□□□□ -1.03
COL4A5-201ENST00000328300 DEFB135Q30KP9 77 aa8.62□□□□□ -1.03
COL4A5-201ENST00000328300 PIK3CD-AS1Q5SR53 167 aa8.62□□□□□ -1.03
COL4A5-201ENST00000328300 F8W735 103 aaPredicted RBP8.61□□□□□ -1.03
COL4A5-201ENST00000328300 LY6G6DO95868 133 aa8.61□□□□□ -1.03
COL4A5-201ENST00000328300 Q6ZQT7 251 aa8.61□□□□□ -1.03
COL4A5-201ENST00000328300 MDFICQ9P1T7 246 aa8.61□□□□□ -1.03
COL4A5-201ENST00000328300 COL4A2P08572 1712 aa8.61□□□□□ -1.03
COL4A5-201ENST00000328300 IGLL5B9A064 214 aa8.61□□□□□ -1.03
COL4A5-201ENST00000328300 NUPR1O60356 82 aa8.61□□□□□ -1.03
COL4A5-201ENST00000328300 NXPH4O95158 308 aa8.61□□□□□ -1.03
COL4A5-201ENST00000328300 VSIG2Q96IQ7 327 aa8.61□□□□□ -1.03
COL4A5-201ENST00000328300 DSCR8Q96T75 97 aa8.61□□□□□ -1.03
COL4A5-201ENST00000328300 ANKHD1Q8IWZ3 2542 aaKnown RBP8.6□□□□□ -1.03
COL4A5-201ENST00000328300 E9PLD3 99 aa8.6□□□□□ -1.03
COL4A5-201ENST00000328300 RNASE8Q8TDE3 154 aaKnown RBP8.6□□□□□ -1.03
COL4A5-201ENST00000328300 TINCRA0A1B0GVN0 87 aa8.6□□□□□ -1.03
COL4A5-201ENST00000328300 KIR2DL5BQ8NHK3 375 aa8.6□□□□□ -1.03
COL4A5-201ENST00000328300 INAFM1C9JVW0 142 aa8.6□□□□□ -1.03
COL4A5-201ENST00000328300 BAALCQ8WXS3 180 aa8.6□□□□□ -1.03
COL4A5-201ENST00000328300 CACNA1GO43497 2377 aa8.6□□□□□ -1.03
COL4A5-201ENST00000328300 TDRG1Q3Y452 100 aa8.59□□□□□ -1.03
COL4A5-201ENST00000328300 ACYP1P07311 99 aa8.59□□□□□ -1.03
COL4A5-201ENST00000328300 A0A0J9YXV3 536 aa8.59□□□□□ -1.03
COL4A5-201ENST00000328300 TMEM258P61165 79 aa8.59□□□□□ -1.03
COL4A5-201ENST00000328300 RBM3P98179 157 aaKnown RBP8.58□□□□□ -1.04
COL4A5-201ENST00000328300 C11orf45Q8TAV5 145 aa8.58□□□□□ -1.04
COL4A5-201ENST00000328300 SHANK1Q9Y566 2161 aa8.58□□□□□ -1.04
COL4A5-201ENST00000328300 TRBV6-4A0A1B0GX49 114 aa8.58□□□□□ -1.04
COL4A5-201ENST00000328300 BAALC-AS2P0C853 105 aa8.58□□□□□ -1.04
COL4A5-201ENST00000328300 LINC01006Q8NI28 216 aa8.58□□□□□ -1.04
COL4A5-201ENST00000328300 RS1O15537 224 aa8.57□□□□□ -1.04
COL4A5-201ENST00000328300 WNK2Q9Y3S1 2297 aa8.57□□□□□ -1.04
COL4A5-201ENST00000328300 UBE2BP63146 152 aa8.57□□□□□ -1.04
COL4A5-201ENST00000328300 ANKRD39Q53RE8 183 aa8.57□□□□□ -1.04
COL4A5-201ENST00000328300 NBASA2RRP1 2371 aa8.57□□□□□ -1.04
COL4A5-201ENST00000328300 SMIM20Q8N5G0 67 aa8.57□□□□□ -1.04
COL4A5-201ENST00000328300 IGHV1-58A0A0C4DH39 117 aa8.57□□□□□ -1.04
COL4A5-201ENST00000328300 ZNF80P51504 273 aaPredicted RBP8.57□□□□□ -1.04
COL4A5-201ENST00000328300 RNASE13Q5GAN3 156 aaKnown RBP8.57□□□□□ -1.04
COL4A5-201ENST00000328300 ORMDL1Q9P0S3 153 aa8.57□□□□□ -1.04
COL4A5-201ENST00000328300 NCOA6Q14686 2063 aaPredicted RBP8.57□□□□□ -1.04
COL4A5-201ENST00000328300 LINC00173Q6ZV60 143 aa8.57□□□□□ -1.04
COL4A5-201ENST00000328300 TNRC6AQ8NDV7 1962 aaKnown RBP8.57□□□□□ -1.04
COL4A5-201ENST00000328300 POLEQ07864 2286 aa8.56□□□□□ -1.04
COL4A5-201ENST00000328300 C5orf38Q86SI9 138 aa8.56□□□□□ -1.04
COL4A5-201ENST00000328300 MRGPRG-AS1Q2M3A8 158 aa8.56□□□□□ -1.04
COL4A5-201ENST00000328300 CLPSL2Q6UWE3 100 aa8.56□□□□□ -1.04
COL4A5-201ENST00000328300 PCNX1Q96RV3 2341 aa8.56□□□□□ -1.04
COL4A5-201ENST00000328300 C16orf95Q9H693 158 aa8.56□□□□□ -1.04
COL4A5-201ENST00000328300 ZFAND2AQ8N6M9 145 aa8.56□□□□□ -1.04
COL4A5-201ENST00000328300 TRBV6-5A0A0K0K1A5 114 aa8.55□□□□□ -1.04
COL4A5-201ENST00000328300 TIRAPP58753 221 aa8.55□□□□□ -1.04
COL4A5-201ENST00000328300 IGHV3-30P01768 117 aa8.55□□□□□ -1.04
COL4A5-201ENST00000328300 IGHV3-33P01772 117 aa8.55□□□□□ -1.04
COL4A5-201ENST00000328300 IGHV3-30-3P0DP02 117 aa8.55□□□□□ -1.04
COL4A5-201ENST00000328300 IGHV3-30-5P0DP03 117 aa8.55□□□□□ -1.04
COL4A5-201ENST00000328300 SND1-IT1Q9HBX3 110 aa8.55□□□□□ -1.04
COL4A5-201ENST00000328300 U3KQK5 164 aa8.55□□□□□ -1.04
COL4A5-201ENST00000328300 ETDCA0A1B0GVM5 59 aa8.55□□□□□ -1.04
COL4A5-201ENST00000328300 TAX1BP3O14907 124 aa8.55□□□□□ -1.04
COL4A5-201ENST00000328300 C20orf173Q96LM9 149 aa8.55□□□□□ -1.04
COL4A5-201ENST00000328300 MED12LQ86YW9 2145 aa8.55□□□□□ -1.04
COL4A5-201ENST00000328300 ODF1Q14990 250 aa8.54□□□□□ -1.04
COL4A5-201ENST00000328300 TEN1Q86WV5 123 aa8.54□□□□□ -1.04
COL4A5-201ENST00000328300 Q9HAA7 133 aa8.54□□□□□ -1.04
COL4A5-201ENST00000328300 ABCA1O95477 2261 aa8.54□□□□□ -1.04
COL4A5-201ENST00000328300 SPAG11BQ08648 103 aa8.54□□□□□ -1.04
COL4A5-201ENST00000328300 IGHV4-4A0A075B6R2 117 aa8.54□□□□□ -1.04
COL4A5-201ENST00000328300 WFDC2Q14508 124 aa8.54□□□□□ -1.04
COL4A5-201ENST00000328300 KLLNB2CW77 178 aa8.53□□□□□ -1.04
COL4A5-201ENST00000328300 CHD3Q12873 2000 aaKnown RBP8.53□□□□□ -1.04
COL4A5-201ENST00000328300 FXYD2P54710 66 aa8.53□□□□□ -1.04
COL4A5-201ENST00000328300 HIST2H2BCQ6DN03 193 aa8.53□□□□□ -1.04
COL4A5-201ENST00000328300 FREM1Q5H8C1 2179 aa8.53□□□□□ -1.04
COL4A5-201ENST00000328300 RPL39P62891 51 aaKnown RBP8.53□□□□□ -1.04
COL4A5-201ENST00000328300 RPL18AQ02543 176 aaKnown RBP8.53□□□□□ -1.04
COL4A5-201ENST00000328300 ARHGAP21Q5T5U3 1957 aa8.52□□□□□ -1.04
COL4A5-201ENST00000328300 CDSNQ15517 529 aa8.52□□□□□ -1.05
COL4A5-201ENST00000328300 PYGO1Q9Y3Y4 419 aa8.52□□□□□ -1.05
COL4A5-201ENST00000328300 DOPEY2Q9Y3R5 2298 aa8.52□□□□□ -1.05
COL4A5-201ENST00000328300 FAM222AQ5U5X8 452 aa8.52□□□□□ -1.05
COL4A5-201ENST00000328300 Q6ZTI0 123 aa8.52□□□□□ -1.05
COL4A5-201ENST00000328300 OPRPNQ99935 248 aaPredicted RBP8.52□□□□□ -1.05
COL4A5-201ENST00000328300 A0A0B4J2C4 111 aa8.51□□□□□ -1.05
COL4A5-201ENST00000328300 ATOX1O00244 68 aa8.51□□□□□ -1.05
COL4A5-201ENST00000328300 FOXI1Q12951 378 aa8.51□□□□□ -1.05
COL4A5-201ENST00000328300 UFSP1Q6NVU6 142 aa8.51□□□□□ -1.05
COL4A5-201ENST00000328300 A4D1N5 150 aa8.51□□□□□ -1.05
COL4A5-201ENST00000328300 IGLV2-11P01706 119 aa8.51□□□□□ -1.05
COL4A5-201ENST00000328300 LINC01620Q4KN68 170 aa8.51□□□□□ -1.05
COL4A5-201ENST00000328300 MUSTN1Q8IVN3 82 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms