RNA–Protein interactions for RNA: ENST00000328024.10

RAB11B-201, Transcript of RAB11B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11B, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-201ENST00000328024 AP5S1Q9NUS5 200 aa14.22□□□□□ -0.13
RAB11B-201ENST00000328024 IGHV1-24A0A0C4DH33 117 aa14.22□□□□□ -0.13
RAB11B-201ENST00000328024 C2orf88Q9BSF0 95 aa14.22□□□□□ -0.13
RAB11B-201ENST00000328024 RNASE3P12724 160 aaKnown RBP14.21□□□□□ -0.13
RAB11B-201ENST00000328024 TWIST1Q15672 202 aa14.21□□□□□ -0.13
RAB11B-201ENST00000328024 FA2HQ7L5A8 372 aa14.21□□□□□ -0.13
RAB11B-201ENST00000328024 PRSS3P2Q8NHM4 247 aa14.21□□□□□ -0.13
RAB11B-201ENST00000328024 LYSTQ99698 3801 aa14.21□□□□□ -0.14
RAB11B-201ENST00000328024 IGLL5B9A064 214 aa14.2□□□□□ -0.14
RAB11B-201ENST00000328024 PRELID3AQ96N28 172 aa14.2□□□□□ -0.14
RAB11B-201ENST00000328024 KLK5Q9Y337 293 aaPredicted RBP14.2□□□□□ -0.14
RAB11B-201ENST00000328024 PAM16Q9Y3D7 125 aa14.2□□□□□ -0.14
RAB11B-201ENST00000328024 SACSQ9NZJ4 4579 aa14.2□□□□□ -0.14
RAB11B-201ENST00000328024 CACNG7P62955 275 aa14.19□□□□□ -0.14
RAB11B-201ENST00000328024 LGALS9BQ3B8N2 356 aa14.19□□□□□ -0.14
RAB11B-201ENST00000328024 PET117Q6UWS5 81 aa14.19□□□□□ -0.14
RAB11B-201ENST00000328024 C9orf85Q96MD7 179 aa14.19□□□□□ -0.14
RAB11B-201ENST00000328024 SPXQ9BT56 116 aa14.19□□□□□ -0.14
RAB11B-201ENST00000328024 IGHV4-4A0A075B6R2 117 aa14.19□□□□□ -0.14
RAB11B-201ENST00000328024 MAP1LC3CQ9BXW4 147 aa14.19□□□□□ -0.14
RAB11B-201ENST00000328024 MUC4Q99102 2169 aa14.18□□□□□ -0.14
RAB11B-201ENST00000328024 M0R143 59 aa14.18□□□□□ -0.14
RAB11B-201ENST00000328024 ATP5G1P05496 136 aa14.18□□□□□ -0.14
RAB11B-201ENST00000328024 MRPL51Q4U2R6 128 aaKnown RBP14.18□□□□□ -0.14
RAB11B-201ENST00000328024 OR10AG1Q8NH19 301 aa14.18□□□□□ -0.14
RAB11B-201ENST00000328024 RASL10AQ92737 203 aa14.18□□□□□ -0.14
RAB11B-201ENST00000328024 C18orf15Q96N68 181 aa14.18□□□□□ -0.14
RAB11B-201ENST00000328024 TRAV9-2A0A087WT02 112 aa14.17□□□□□ -0.14
RAB11B-201ENST00000328024 D6R8Y8 96 aa14.17□□□□□ -0.14
RAB11B-201ENST00000328024 SYS1-DBNDD2H3BUS1 97 aa14.17□□□□□ -0.14
RAB11B-201ENST00000328024 CKS2P33552 79 aa14.17□□□□□ -0.14
RAB11B-201ENST00000328024 SPATA45Q537H7 98 aa14.17□□□□□ -0.14
RAB11B-201ENST00000328024 SMIM15Q7Z3B0 74 aa14.17□□□□□ -0.14
RAB11B-201ENST00000328024 AMN1Q8IY45 258 aa14.17□□□□□ -0.14
RAB11B-201ENST00000328024 UQCR10Q9UDW1 63 aa14.17□□□□□ -0.14
RAB11B-201ENST00000328024 APLNQ9ULZ1 77 aa14.17□□□□□ -0.14
RAB11B-201ENST00000328024 TRGV2A0A075B6R0 118 aa14.17□□□□□ -0.14
RAB11B-201ENST00000328024 SPATA12Q7Z6I5 190 aa14.17□□□□□ -0.14
RAB11B-201ENST00000328024 F5H768 121 aa14.16□□□□□ -0.14
RAB11B-201ENST00000328024 M0R2P5 195 aa14.16□□□□□ -0.14
RAB11B-201ENST00000328024 SNAI2O43623 268 aa14.16□□□□□ -0.14
RAB11B-201ENST00000328024 POM121L12Q8N7R1 296 aa14.16□□□□□ -0.14
RAB11B-201ENST00000328024 DNAH1Q9P2D7 4330 aa14.15□□□□□ -0.14
RAB11B-201ENST00000328024 ASIPP42127 132 aa14.15□□□□□ -0.14
RAB11B-201ENST00000328024 HYDINQ4G0P3 5121 aa14.15□□□□□ -0.14
RAB11B-201ENST00000328024 RYR2Q92736 4967 aa14.14□□□□□ -0.15
RAB11B-201ENST00000328024 IGHV3-53P01767 116 aa14.14□□□□□ -0.15
RAB11B-201ENST00000328024 MED14OSP0DP75 135 aa14.14□□□□□ -0.15
RAB11B-201ENST00000328024 H3BVH4 76 aa14.14□□□□□ -0.15
RAB11B-201ENST00000328024 RYR3Q15413 4870 aa14.14□□□□□ -0.15
RAB11B-201ENST00000328024 ALMS1Q8TCU4 4167 aa14.13□□□□□ -0.15
RAB11B-201ENST00000328024 LINC01546A6NGU7 62 aa14.13□□□□□ -0.15
RAB11B-201ENST00000328024 IGLC3P0DOY3 106 aa14.13□□□□□ -0.15
RAB11B-201ENST00000328024 S100A4P26447 101 aaKnown RBP14.13□□□□□ -0.15
RAB11B-201ENST00000328024 ZNF876PQ49A33 203 aa14.12□□□□□ -0.15
RAB11B-201ENST00000328024 RNF185Q96GF1 192 aa14.12□□□□□ -0.15
RAB11B-201ENST00000328024 ZNF479Q96JC4 524 aa14.12□□□□□ -0.15
RAB11B-201ENST00000328024 IFI27P40305 119 aaPredicted RBP14.11□□□□□ -0.15
RAB11B-201ENST00000328024 MAP1LC3AQ9H492 121 aa14.11□□□□□ -0.15
RAB11B-201ENST00000328024 NXT2Q9NPJ8 142 aaKnown RBP14.11□□□□□ -0.15
RAB11B-201ENST00000328024 SCRT2Q9NQ03 307 aa14.11□□□□□ -0.15
RAB11B-201ENST00000328024 PRSS47A8MTI9 375 aa14.11□□□□□ -0.15
RAB11B-201ENST00000328024 PTH2Q96A98 100 aa14.11□□□□□ -0.15
RAB11B-201ENST00000328024 ST20Q9HBF5 79 aa14.11□□□□□ -0.15
RAB11B-201ENST00000328024 FHL2Q14192 279 aa14.1□□□□□ -0.15
RAB11B-201ENST00000328024 VPS13DQ5THJ4 4388 aa14.1□□□□□ -0.15
RAB11B-201ENST00000328024 TCTAP57738 103 aa14.09□□□□□ -0.15
RAB11B-201ENST00000328024 SNHG12Q9BXW3 62 aa14.09□□□□□ -0.15
RAB11B-201ENST00000328024 TRAV26-1A0A087WT03 109 aa14.09□□□□□ -0.15
RAB11B-201ENST00000328024 HSBP1L1C9JCN9 74 aa14.09□□□□□ -0.15
RAB11B-201ENST00000328024 HBDP02042 147 aa14.09□□□□□ -0.15
RAB11B-201ENST00000328024 LINC01545Q5VT33 79 aa14.09□□□□□ -0.15
RAB11B-201ENST00000328024 NACAE9PAV3 2078 aa14.08□□□□□ -0.15
RAB11B-201ENST00000328024 A0A0J9YY99 117 aa14.08□□□□□ -0.16
RAB11B-201ENST00000328024 LCE6AA0A183 80 aa14.08□□□□□ -0.16
RAB11B-201ENST00000328024 NPYP01303 97 aa14.08□□□□□ -0.16
RAB11B-201ENST00000328024 SPANXN1Q5VSR9 72 aa14.08□□□□□ -0.16
RAB11B-201ENST00000328024 VSIG2Q96IQ7 327 aa14.08□□□□□ -0.16
RAB11B-201ENST00000328024 JPT2Q9H910 190 aa14.08□□□□□ -0.16
RAB11B-201ENST00000328024 MSRB1Q9NZV6 116 aa14.08□□□□□ -0.16
RAB11B-201ENST00000328024 TRAV4A0A0B4J268 109 aa14.07□□□□□ -0.16
RAB11B-201ENST00000328024 MUC21A0A0G2JKD1 596 aa14.07□□□□□ -0.16
RAB11B-201ENST00000328024 MUC21A0A140T8X8 626 aa14.07□□□□□ -0.16
RAB11B-201ENST00000328024 RS1O15537 224 aa14.07□□□□□ -0.16
RAB11B-201ENST00000328024 CFAP126Q5VTH2 177 aa14.07□□□□□ -0.16
RAB11B-201ENST00000328024 OR4C5Q8NGB2 326 aa14.07□□□□□ -0.16
RAB11B-201ENST00000328024 MRPS16Q9Y3D3 137 aaKnown RBP14.07□□□□□ -0.16
RAB11B-201ENST00000328024 SSTP61278 116 aa14.06□□□□□ -0.16
RAB11B-201ENST00000328024 LINC00476Q8WZB0 136 aa14.06□□□□□ -0.16
RAB11B-201ENST00000328024 MRAP2Q96G30 205 aa14.06□□□□□ -0.16
RAB11B-201ENST00000328024 LOC389332A0A1B0GUA5 103 aa14.06□□□□□ -0.16
RAB11B-201ENST00000328024 TNFRSF6BO95407 300 aa14.06□□□□□ -0.16
RAB11B-201ENST00000328024 LINC00173Q6ZV60 143 aa14.05□□□□□ -0.16
RAB11B-201ENST00000328024 PHLDA3Q9Y5J5 127 aa14.05□□□□□ -0.16
RAB11B-201ENST00000328024 HNRNPA3P51991 378 aaKnown RBP14.04□□□□□ -0.16
RAB11B-201ENST00000328024 LGALS9CQ6DKI2 356 aa14.04□□□□□ -0.16
RAB11B-201ENST00000328024 Q6ZN92 141 aa14.04□□□□□ -0.16
RAB11B-201ENST00000328024 Q8N8P6 123 aa14.04□□□□□ -0.16
RAB11B-201ENST00000328024 A0A096LNJ9 63 aa14.04□□□□□ -0.16
RAB11B-201ENST00000328024 IGHV3-73A0A0B4J1V6 119 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms