RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 LINC01548A6NM66 108 aa5.78□□□□□ -1.48
CDHR3-201ENST00000317716 CEMP1Q6PRD7 247 aaPredicted RBP5.78□□□□□ -1.48
CDHR3-201ENST00000317716 C11orf44Q8N8P7 122 aa5.78□□□□□ -1.48
CDHR3-201ENST00000317716 TMEM101Q96IK0 257 aa5.78□□□□□ -1.48
CDHR3-201ENST00000317716 SNRPD3P62318 126 aaKnown RBP5.77□□□□□ -1.49
CDHR3-201ENST00000317716 C9orf139Q6ZV77 190 aa5.77□□□□□ -1.49
CDHR3-201ENST00000317716 NFE4Q86UQ8 179 aa5.77□□□□□ -1.49
CDHR3-201ENST00000317716 ITLN2Q8WWU7 325 aaPredicted RBP5.77□□□□□ -1.49
CDHR3-201ENST00000317716 FANCD2OSQ96PS1 177 aa5.77□□□□□ -1.49
CDHR3-201ENST00000317716 C11orf21Q9P2W6 132 aa5.77□□□□□ -1.49
CDHR3-201ENST00000317716 NDUFV3P56181 108 aaKnown RBP5.77□□□□□ -1.49
CDHR3-201ENST00000317716 Q8N1Y9 231 aa5.77□□□□□ -1.49
CDHR3-201ENST00000317716 UNC79Q9P2D8 2635 aa5.77□□□□□ -1.49
CDHR3-201ENST00000317716 IGLC6P0CF74 106 aa5.77□□□□□ -1.49
CDHR3-201ENST00000317716 SPATA25Q9BR10 227 aa5.77□□□□□ -1.49
CDHR3-201ENST00000317716 OVOL1O14753 267 aa5.76□□□□□ -1.49
CDHR3-201ENST00000317716 CRIP2P52943 208 aaPredicted RBP5.76□□□□□ -1.49
CDHR3-201ENST00000317716 NUP37Q8NFH4 326 aa5.76□□□□□ -1.49
CDHR3-201ENST00000317716 THBDP07204 575 aa5.76□□□□□ -1.49
CDHR3-201ENST00000317716 PIP4P2Q8N4L2 257 aa5.76□□□□□ -1.49
CDHR3-201ENST00000317716 DYNLRB2Q8TF09 96 aa5.76□□□□□ -1.49
CDHR3-201ENST00000317716 IGLV11-55A0A075B6I3 123 aa5.76□□□□□ -1.49
CDHR3-201ENST00000317716 BUB3O43684 328 aa5.76□□□□□ -1.49
CDHR3-201ENST00000317716 HOXB4P17483 251 aaPredicted RBP5.76□□□□□ -1.49
CDHR3-201ENST00000317716 CFAP126Q5VTH2 177 aa5.76□□□□□ -1.49
CDHR3-201ENST00000317716 PRIMA1Q86XR5 153 aa5.76□□□□□ -1.49
CDHR3-201ENST00000317716 LINC01587Q99440 93 aa5.76□□□□□ -1.49
CDHR3-201ENST00000317716 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.75□□□□□ -1.49
CDHR3-201ENST00000317716 IGKV2-29A2NJV5 120 aaPredicted RBP5.75□□□□□ -1.49
CDHR3-201ENST00000317716 SHISA9B4DS77 424 aa5.75□□□□□ -1.49
CDHR3-201ENST00000317716 UBE2L6O14933 153 aa5.75□□□□□ -1.49
CDHR3-201ENST00000317716 IGLV1-47P01700 117 aa5.75□□□□□ -1.49
CDHR3-201ENST00000317716 TINCRA0A1B0GVN0 87 aa5.75□□□□□ -1.49
CDHR3-201ENST00000317716 A8MZ25 164 aa5.75□□□□□ -1.49
CDHR3-201ENST00000317716 SUMO4Q6EEV6 95 aa5.75□□□□□ -1.49
CDHR3-201ENST00000317716 CCL19Q99731 98 aa5.75□□□□□ -1.49
CDHR3-201ENST00000317716 IGKV3D-7A0A0C4DH55 119 aa5.75□□□□□ -1.49
CDHR3-201ENST00000317716 MORN3Q6PF18 240 aaPredicted RBP5.75□□□□□ -1.49
CDHR3-201ENST00000317716 RASL10AQ92737 203 aa5.75□□□□□ -1.49
CDHR3-201ENST00000317716 RNF5Q99942 180 aa5.75□□□□□ -1.49
CDHR3-201ENST00000317716 BPESC1Q9GZL8 116 aa5.75□□□□□ -1.49
CDHR3-201ENST00000317716 IGHV7-81A0A0B4J1V7 117 aa5.74□□□□□ -1.49
CDHR3-201ENST00000317716 H3BUX3 64 aa5.74□□□□□ -1.49
CDHR3-201ENST00000317716 LINC00158P58513 81 aa5.74□□□□□ -1.49
CDHR3-201ENST00000317716 TRBV7-3A0A075B6L6 115 aa5.74□□□□□ -1.49
CDHR3-201ENST00000317716 LY6G5BQ8NDX9 201 aa5.74□□□□□ -1.49
CDHR3-201ENST00000317716 SMAD5-AS1Q9Y6J3 95 aa5.74□□□□□ -1.49
CDHR3-201ENST00000317716 ZANQ9Y493 2812 aa5.74□□□□□ -1.49
CDHR3-201ENST00000317716 FSTL3O95633 263 aa5.74□□□□□ -1.49
CDHR3-201ENST00000317716 TRBV12-3P01733 135 aa5.74□□□□□ -1.49
CDHR3-201ENST00000317716 UBE2E1P51965 193 aa5.74□□□□□ -1.49
CDHR3-201ENST00000317716 Q6ZSV7 163 aa5.74□□□□□ -1.49
CDHR3-201ENST00000317716 UBE2E2Q96LR5 201 aa5.74□□□□□ -1.49
CDHR3-201ENST00000317716 TRAV12-1A0A0B4J245 112 aa5.73□□□□□ -1.49
CDHR3-201ENST00000317716 A0A0J9YY99 117 aa5.73□□□□□ -1.49
CDHR3-201ENST00000317716 M0R1W7 72 aa5.73□□□□□ -1.49
CDHR3-201ENST00000317716 TOMM6Q96B49 74 aa5.73□□□□□ -1.49
CDHR3-201ENST00000317716 TRGV11A0A075B6L2 103 aa5.73□□□□□ -1.49
CDHR3-201ENST00000317716 MRPS12O15235 138 aaKnown RBP5.73□□□□□ -1.49
CDHR3-201ENST00000317716 PAX4O43316 350 aa5.73□□□□□ -1.49
CDHR3-201ENST00000317716 CRLF1O75462 422 aa5.73□□□□□ -1.49
CDHR3-201ENST00000317716 P0DMU3 169 aa5.73□□□□□ -1.49
CDHR3-201ENST00000317716 FAM231AP0DMU4 169 aa5.73□□□□□ -1.49
CDHR3-201ENST00000317716 FAM231CP0DMU5 169 aa5.73□□□□□ -1.49
CDHR3-201ENST00000317716 INS-IGF2F8WCM5 200 aa5.73□□□□□ -1.49
CDHR3-201ENST00000317716 PFN2P35080 140 aa5.73□□□□□ -1.49
CDHR3-201ENST00000317716 SHISA2Q6UWI4 295 aa5.73□□□□□ -1.49
CDHR3-201ENST00000317716 UNQ9165/PRO28630Q6UXU0 137 aa5.73□□□□□ -1.49
CDHR3-201ENST00000317716 U3KQK5 164 aa5.73□□□□□ -1.49
CDHR3-201ENST00000317716 ATRQ13535 2644 aa5.73□□□□□ -1.49
CDHR3-201ENST00000317716 PRR9Q5T870 116 aa5.72□□□□□ -1.49
CDHR3-201ENST00000317716 FAM110DQ8TAY7 271 aaPredicted RBP5.72□□□□□ -1.49
CDHR3-201ENST00000317716 ICOSQ9Y6W8 199 aa5.72□□□□□ -1.49
CDHR3-201ENST00000317716 TEX15Q9BXT5 2789 aa5.72□□□□□ -1.49
CDHR3-201ENST00000317716 A0A1W2PRX2 142 aa5.72□□□□□ -1.49
CDHR3-201ENST00000317716 RPL32P62910 135 aaKnown RBP5.72□□□□□ -1.49
CDHR3-201ENST00000317716 NRACQ8N912 160 aa5.72□□□□□ -1.49
CDHR3-201ENST00000317716 NEXN-AS1Q8NBZ9 246 aa5.72□□□□□ -1.49
CDHR3-201ENST00000317716 CDIP1Q9H305 208 aa5.72□□□□□ -1.49
CDHR3-201ENST00000317716 UBR5O95071 2799 aaPredicted RBP5.72□□□□□ -1.49
CDHR3-201ENST00000317716 TENM4Q6N022 2769 aa5.72□□□□□ -1.49
CDHR3-201ENST00000317716 PLA2G2AP14555 144 aa5.72□□□□□ -1.49
CDHR3-201ENST00000317716 CFHR3Q02985 330 aa5.72□□□□□ -1.49
CDHR3-201ENST00000317716 YAE1D1Q9NRH1 226 aa5.72□□□□□ -1.49
CDHR3-201ENST00000317716 ZNF580Q9UK33 172 aa5.72□□□□□ -1.49
CDHR3-201ENST00000317716 TRBV7-1A0A0A6YYK4 115 aa5.71□□□□□ -1.49
CDHR3-201ENST00000317716 TMEM141Q96I45 108 aa5.71□□□□□ -1.49
CDHR3-201ENST00000317716 MDFICQ9P1T7 246 aa5.71□□□□□ -1.49
CDHR3-201ENST00000317716 MOB4Q9Y3A3 225 aa5.71□□□□□ -1.49
CDHR3-201ENST00000317716 Q9HAA7 133 aa5.71□□□□□ -1.5
CDHR3-201ENST00000317716 KAAG1Q9UBP8 84 aa5.71□□□□□ -1.5
CDHR3-201ENST00000317716 TRIAP1O43715 76 aa5.71□□□□□ -1.5
CDHR3-201ENST00000317716 CRPP02741 224 aa5.71□□□□□ -1.5
CDHR3-201ENST00000317716 ATP6V0E2Q8NHE4 81 aa5.71□□□□□ -1.5
CDHR3-201ENST00000317716 AJUBAQ96IF1 538 aa5.71□□□□□ -1.5
CDHR3-201ENST00000317716 Q9H8V8 135 aa5.71□□□□□ -1.5
CDHR3-201ENST00000317716 TRGV1A0A0A0MS02 117 aa5.7□□□□□ -1.5
CDHR3-201ENST00000317716 I3L3M4 83 aa5.7□□□□□ -1.5
CDHR3-201ENST00000317716 SMCPP49901 116 aaPredicted RBP5.7□□□□□ -1.5
CDHR3-201ENST00000317716 KRTAP10-9P60411 292 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms