RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 TCTE3Q8IZS6 198 aa11.75□□□□□ -0.53
TPM1-203ENST00000317516 BAALCQ8WXS3 180 aa11.75□□□□□ -0.53
TPM1-203ENST00000317516 AP1S3Q96PC3 154 aa11.75□□□□□ -0.53
TPM1-203ENST00000317516 BIN3Q9NQY0 253 aa11.75□□□□□ -0.53
TPM1-203ENST00000317516 MEF2BQ02080 365 aaPredicted RBP11.74□□□□□ -0.53
TPM1-203ENST00000317516 WFDC2Q14508 124 aa11.74□□□□□ -0.53
TPM1-203ENST00000317516 SLC51BQ86UW2 128 aa11.74□□□□□ -0.53
TPM1-203ENST00000317516 OR2D3Q8NGH3 330 aa11.74□□□□□ -0.53
TPM1-203ENST00000317516 TPPP3Q9BW30 176 aa11.74□□□□□ -0.53
TPM1-203ENST00000317516 FER1L6-AS1Q8NA97 138 aa11.73□□□□□ -0.53
TPM1-203ENST00000317516 MED9Q9NWA0 146 aa11.73□□□□□ -0.53
TPM1-203ENST00000317516 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.72□□□□□ -0.53
TPM1-203ENST00000317516 RAB19A4D1S5 217 aa11.72□□□□□ -0.53
TPM1-203ENST00000317516 F2Z2F3 143 aa11.72□□□□□ -0.53
TPM1-203ENST00000317516 CRPP02741 224 aa11.72□□□□□ -0.53
TPM1-203ENST00000317516 TAGLN2P37802 199 aaKnown RBP11.72□□□□□ -0.53
TPM1-203ENST00000317516 CACNG7P62955 275 aa11.72□□□□□ -0.53
TPM1-203ENST00000317516 CHCHD5Q9BSY4 110 aa11.72□□□□□ -0.53
TPM1-203ENST00000317516 H7C1H1 209 aa11.71□□□□□ -0.53
TPM1-203ENST00000317516 IGLV2-8P01709 118 aa11.71□□□□□ -0.53
TPM1-203ENST00000317516 P01737 135 aa11.71□□□□□ -0.53
TPM1-203ENST00000317516 ATRAIDQ6UW56 229 aa11.71□□□□□ -0.53
TPM1-203ENST00000317516 C1orf43Q9BWL3 253 aa11.71□□□□□ -0.53
TPM1-203ENST00000317516 VAX2Q9UIW0 290 aa11.71□□□□□ -0.53
TPM1-203ENST00000317516 KIF25-AS1Q9Y6Z4 181 aa11.71□□□□□ -0.53
TPM1-203ENST00000317516 C19orf71A6NCJ1 209 aa11.7□□□□□ -0.54
TPM1-203ENST00000317516 ANGP03950 147 aaKnown RBP11.7□□□□□ -0.54
TPM1-203ENST00000317516 IGLC6P0CF74 106 aa11.7□□□□□ -0.54
TPM1-203ENST00000317516 GZMBP10144 247 aa11.7□□□□□ -0.54
TPM1-203ENST00000317516 BCL2P10415 239 aa11.7□□□□□ -0.54
TPM1-203ENST00000317516 HAMPP81172 84 aa11.7□□□□□ -0.54
TPM1-203ENST00000317516 C15orf54Q8N8G6 183 aa11.7□□□□□ -0.54
TPM1-203ENST00000317516 DNAJC30Q96LL9 226 aa11.7□□□□□ -0.54
TPM1-203ENST00000317516 FAM30AQ9NZY2 134 aa11.7□□□□□ -0.54
TPM1-203ENST00000317516 MGPP08493 103 aa11.69□□□□□ -0.54
TPM1-203ENST00000317516 C14orf177Q52M58 125 aa11.69□□□□□ -0.54
TPM1-203ENST00000317516 TRBV25-1A0A075B6N4 114 aa11.68□□□□□ -0.54
TPM1-203ENST00000317516 MPV17L2Q567V2 206 aa11.68□□□□□ -0.54
TPM1-203ENST00000317516 M0QY20 66 aa11.67□□□□□ -0.54
TPM1-203ENST00000317516 TRGC1P0CF51 173 aa11.67□□□□□ -0.54
TPM1-203ENST00000317516 ENHOQ6UWT2 76 aa11.67□□□□□ -0.54
TPM1-203ENST00000317516 MIAQ16674 131 aa11.66□□□□□ -0.54
TPM1-203ENST00000317516 WDR73Q6P4I2 378 aa11.66□□□□□ -0.54
TPM1-203ENST00000317516 Q6ZSA8 131 aa11.66□□□□□ -0.54
TPM1-203ENST00000317516 NTM-AS1Q6ZSK4 140 aa11.66□□□□□ -0.54
TPM1-203ENST00000317516 C9orf62Q8N4C0 152 aa11.66□□□□□ -0.54
TPM1-203ENST00000317516 TRBV20OR9-2A0A075B6H5 130 aa11.65□□□□□ -0.54
TPM1-203ENST00000317516 IGHV1-24A0A0C4DH33 117 aa11.65□□□□□ -0.54
TPM1-203ENST00000317516 LYZL1Q6UWQ5 148 aa11.65□□□□□ -0.54
TPM1-203ENST00000317516 NTF3P20783 257 aa11.64□□□□□ -0.55
TPM1-203ENST00000317516 IQCJQ1A5X6 159 aa11.64□□□□□ -0.55
TPM1-203ENST00000317516 SUMO4Q6EEV6 95 aa11.64□□□□□ -0.55
TPM1-203ENST00000317516 RASL11AQ6T310 242 aa11.64□□□□□ -0.55
TPM1-203ENST00000317516 Q6ZNX1 250 aa11.64□□□□□ -0.55
TPM1-203ENST00000317516 NUDT10Q8NFP7 164 aa11.64□□□□□ -0.55
TPM1-203ENST00000317516 NUDT11Q96G61 164 aa11.64□□□□□ -0.55
TPM1-203ENST00000317516 DPH3P1Q9H4G8 78 aa11.64□□□□□ -0.55
TPM1-203ENST00000317516 PLA2G1BP04054 148 aaKnown RBP11.63□□□□□ -0.55
TPM1-203ENST00000317516 RBX1P62877 108 aa11.63□□□□□ -0.55
TPM1-203ENST00000317516 GAGE6Q13070 117 aa11.63□□□□□ -0.55
TPM1-203ENST00000317516 AKAP14Q86UN6 197 aa11.63□□□□□ -0.55
TPM1-203ENST00000317516 NKX2-5P52952 324 aaPredicted RBP11.62□□□□□ -0.55
TPM1-203ENST00000317516 BLOC1S1P78537 153 aa11.62□□□□□ -0.55
TPM1-203ENST00000317516 LINC01620Q4KN68 170 aa11.62□□□□□ -0.55
TPM1-203ENST00000317516 NIT2Q9NQR4 276 aa11.62□□□□□ -0.55
TPM1-203ENST00000317516 PRR34Q9NV39 138 aa11.62□□□□□ -0.55
TPM1-203ENST00000317516 TWIST1Q15672 202 aa11.61□□□□□ -0.55
TPM1-203ENST00000317516 LINC00269Q8N2A0 174 aa11.61□□□□□ -0.55
TPM1-203ENST00000317516 OCC1Q8TAD7 63 aa11.61□□□□□ -0.55
TPM1-203ENST00000317516 RPP21Q9H633 154 aaKnown RBP11.61□□□□□ -0.55
TPM1-203ENST00000317516 HLA-DQA1P01909 254 aa11.6□□□□□ -0.55
TPM1-203ENST00000317516 CTRLP40313 264 aa11.6□□□□□ -0.55
TPM1-203ENST00000317516 TMEM243Q9BU79 118 aa11.6□□□□□ -0.55
TPM1-203ENST00000317516 USP17L23D6RBM5 183 aa11.59□□□□□ -0.55
TPM1-203ENST00000317516 TMEM250H0YL14 139 aa11.59□□□□□ -0.55
TPM1-203ENST00000317516 SMIM15Q7Z3B0 74 aa11.59□□□□□ -0.55
TPM1-203ENST00000317516 LINC00528Q8N1L1 170 aa11.59□□□□□ -0.55
TPM1-203ENST00000317516 PGLYRP4Q96LB8 373 aa11.59□□□□□ -0.55
TPM1-203ENST00000317516 CHAC1Q9BUX1 264 aa11.59□□□□□ -0.55
TPM1-203ENST00000317516 CNFNQ9BYD5 112 aa11.59□□□□□ -0.55
TPM1-203ENST00000317516 RNASE7Q9H1E1 156 aaKnown RBP11.59□□□□□ -0.55
TPM1-203ENST00000317516 FAT1Q14517 4588 aa11.59□□□□□ -0.55
TPM1-203ENST00000317516 SRRM2Q9UQ35 2752 aaKnown RBP11.58□□□□□ -0.56
TPM1-203ENST00000317516 A0A1B0GUV1 79 aa11.58□□□□□ -0.56
TPM1-203ENST00000317516 DGAT2L7PQ6IED9 249 aa11.58□□□□□ -0.56
TPM1-203ENST00000317516 TRAV8-4A0A0B4J246 113 aa11.57□□□□□ -0.56
TPM1-203ENST00000317516 K7EN84 100 aa11.57□□□□□ -0.56
TPM1-203ENST00000317516 UBE2L6O14933 153 aa11.57□□□□□ -0.56
TPM1-203ENST00000317516 REG3AQ06141 175 aa11.57□□□□□ -0.56
TPM1-203ENST00000317516 COTL1Q14019 142 aa11.57□□□□□ -0.56
TPM1-203ENST00000317516 CLPSL2Q6UWE3 100 aa11.57□□□□□ -0.56
TPM1-203ENST00000317516 ALKAL2Q6UX46 152 aa11.57□□□□□ -0.56
TPM1-203ENST00000317516 SCXQ7RTU7 201 aa11.57□□□□□ -0.56
TPM1-203ENST00000317516 DMBT1Q9UGM3 2413 aaPredicted RBP11.57□□□□□ -0.56
TPM1-203ENST00000317516 CLRN3Q8NCR9 226 aa11.56□□□□□ -0.56
TPM1-203ENST00000317516 hCG_2014768A0A024R1R8 64 aa11.55□□□□□ -0.56
TPM1-203ENST00000317516 GATCO43716 136 aaKnown RBP11.55□□□□□ -0.56
TPM1-203ENST00000317516 AMTP48728 403 aa11.55□□□□□ -0.56
TPM1-203ENST00000317516 TEX261Q6UWH6 196 aa11.55□□□□□ -0.56
TPM1-203ENST00000317516 FLG2Q5D862 2391 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms