RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 PRO1854Q9UHT4 67 aa2.85□□□□□ -1.95
GEN1-201ENST00000317402 TRBV19A0A075B6N1 114 aa2.85□□□□□ -1.95
GEN1-201ENST00000317402 TRAV12-1A0A0B4J245 112 aa2.85□□□□□ -1.95
GEN1-201ENST00000317402 SS18Q15532 418 aa2.85□□□□□ -1.95
GEN1-201ENST00000317402 ZNF493Q6ZR52 646 aa2.85□□□□□ -1.95
GEN1-201ENST00000317402 RPP25LQ8N5L8 163 aaKnown RBP2.85□□□□□ -1.95
GEN1-201ENST00000317402 DPH3Q96FX2 82 aa2.85□□□□□ -1.95
GEN1-201ENST00000317402 VSIG2Q96IQ7 327 aa2.85□□□□□ -1.95
GEN1-201ENST00000317402 TRAV40A0A0B4J280 105 aa2.85□□□□□ -1.95
GEN1-201ENST00000317402 M0R381 172 aa2.85□□□□□ -1.95
GEN1-201ENST00000317402 ELANEP08246 267 aa2.85□□□□□ -1.95
GEN1-201ENST00000317402 CR1LQ2VPA4 569 aa2.85□□□□□ -1.95
GEN1-201ENST00000317402 Q8N7P7 452 aa2.85□□□□□ -1.95
GEN1-201ENST00000317402 CSMD3Q7Z407 3707 aa2.85□□□□□ -1.95
GEN1-201ENST00000317402 ANK3Q12955 4377 aaKnown RBP2.85□□□□□ -1.95
GEN1-201ENST00000317402 SLC25A16P16260 332 aa2.84□□□□□ -1.95
GEN1-201ENST00000317402 CRYGSP22914 178 aa2.84□□□□□ -1.95
GEN1-201ENST00000317402 UBL5Q9BZL1 73 aa2.84□□□□□ -1.95
GEN1-201ENST00000317402 DKK1O94907 266 aa2.84□□□□□ -1.95
GEN1-201ENST00000317402 HTN1P15515 57 aa2.84□□□□□ -1.95
GEN1-201ENST00000317402 A0A087WX48 190 aa2.84□□□□□ -1.95
GEN1-201ENST00000317402 SAA1P0DJI8 122 aaPredicted RBP2.84□□□□□ -1.95
GEN1-201ENST00000317402 PRO3102Q9H379 93 aa2.84□□□□□ -1.95
GEN1-201ENST00000317402 DKK2Q9UBU2 259 aa2.84□□□□□ -1.95
GEN1-201ENST00000317402 TRGV3P03979 118 aa2.84□□□□□ -1.95
GEN1-201ENST00000317402 GATA1P15976 413 aaPredicted RBP2.84□□□□□ -1.95
GEN1-201ENST00000317402 FUSP35637 526 aaKnown RBP eCLIP2.84□□□□□ -1.95
GEN1-201ENST00000317402 UBE2E1P51965 193 aa2.84□□□□□ -1.95
GEN1-201ENST00000317402 LGALS9BQ3B8N2 356 aa2.84□□□□□ -1.95
GEN1-201ENST00000317402 LGALS9CQ6DKI2 356 aa2.84□□□□□ -1.95
GEN1-201ENST00000317402 C4orf26Q17RF5 130 aa2.84□□□□□ -1.96
GEN1-201ENST00000317402 ATP5EP2Q5VTU8 51 aa2.84□□□□□ -1.96
GEN1-201ENST00000317402 TM2D2Q9BX73 214 aa2.84□□□□□ -1.96
GEN1-201ENST00000317402 SMIM26A0A096LP01 95 aa2.84□□□□□ -1.96
GEN1-201ENST00000317402 TMEM254Q8TBM7 123 aa2.84□□□□□ -1.96
GEN1-201ENST00000317402 ZNF503Q96F45 646 aa2.84□□□□□ -1.96
GEN1-201ENST00000317402 IGKV1OR2-108A0A075B7D4 117 aa2.84□□□□□ -1.96
GEN1-201ENST00000317402 RPL36AP83881 106 aaKnown RBP2.84□□□□□ -1.96
GEN1-201ENST00000317402 C9orf139Q6ZV77 190 aa2.84□□□□□ -1.96
GEN1-201ENST00000317402 WFDC9Q8NEX5 89 aa2.84□□□□□ -1.96
GEN1-201ENST00000317402 RPL36ALQ969Q0 106 aaKnown RBP2.84□□□□□ -1.96
GEN1-201ENST00000317402 C9orf85Q96MD7 179 aa2.84□□□□□ -1.96
GEN1-201ENST00000317402 THBDP07204 575 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 HCP5Q6MZN7 132 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 MUSTN1Q8IVN3 82 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 IGHV1-18A0A0C4DH31 117 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 IGF1P05019 195 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 BSPH1Q075Z2 132 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 TMEM133Q9H2Q1 129 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 DAZ1Q9NQZ3 744 aaKnown RBP2.83□□□□□ -1.96
GEN1-201ENST00000317402 SERP1Q9Y6X1 66 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 IGKV1-16P04430 117 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 C11orf53Q8IXP5 236 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 IL17DQ8TAD2 202 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 Q9H3A6 140 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 NTN3O00634 580 aaPredicted RBP2.83□□□□□ -1.96
GEN1-201ENST00000317402 PAX8Q06710 450 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 URB1-AS1Q96HZ7 61 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 SRRM2Q9UQ35 2752 aaKnown RBP2.83□□□□□ -1.96
GEN1-201ENST00000317402 TRAV4A0A0B4J268 109 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 GFRA3O60609 400 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 Q8N1Y9 231 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 Q8N976 141 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 THAP8Q8NA92 274 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 CFHR4Q92496 578 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 PRCDQ00LT1 54 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 RASL10AQ92737 203 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 PYGO2Q9BRQ0 406 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 ESM1Q9NQ30 184 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 SIGLEC9Q9Y336 463 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 NDUFA4O00483 81 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 HAMPP81172 84 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 RHOHQ15669 191 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 LINC01620Q4KN68 170 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 LINC00643Q86TS7 51 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 SLC25A29Q8N8R3 303 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 WIPF2Q8TF74 440 aaPredicted RBP2.83□□□□□ -1.96
GEN1-201ENST00000317402 HIGD1BQ9P298 99 aa2.83□□□□□ -1.96
GEN1-201ENST00000317402 IGLV3-1P01715 115 aa2.82□□□□□ -1.96
GEN1-201ENST00000317402 COX7CP15954 63 aa2.82□□□□□ -1.96
GEN1-201ENST00000317402 KRTAP27-1Q3LI81 207 aa2.82□□□□□ -1.96
GEN1-201ENST00000317402 FAM120AOSQ5T036 256 aa2.82□□□□□ -1.96
GEN1-201ENST00000317402 C20orf197Q8N268 126 aa2.82□□□□□ -1.96
GEN1-201ENST00000317402 TEX49A0A1B0GTD5 131 aa2.82□□□□□ -1.96
GEN1-201ENST00000317402 SMIM27A0A1W2PRY6 76 aa2.82□□□□□ -1.96
GEN1-201ENST00000317402 H3BUA1 57 aa2.82□□□□□ -1.96
GEN1-201ENST00000317402 CAMK2N1Q7Z7J9 78 aa2.82□□□□□ -1.96
GEN1-201ENST00000317402 KLK5Q9Y337 293 aaPredicted RBP2.82□□□□□ -1.96
GEN1-201ENST00000317402 C19orf84I3L1E1 186 aa2.82□□□□□ -1.96
GEN1-201ENST00000317402 GATA4P43694 442 aa2.82□□□□□ -1.96
GEN1-201ENST00000317402 C14orf177Q52M58 125 aa2.82□□□□□ -1.96
GEN1-201ENST00000317402 LY6G5BQ8NDX9 201 aa2.82□□□□□ -1.96
GEN1-201ENST00000317402 FANCD2OSQ96PS1 177 aa2.82□□□□□ -1.96
GEN1-201ENST00000317402 C17orf100A8MU93 164 aa2.82□□□□□ -1.96
GEN1-201ENST00000317402 C12orf77C9JDV5 145 aa2.82□□□□□ -1.96
GEN1-201ENST00000317402 PSCAO43653 123 aa2.82□□□□□ -1.96
GEN1-201ENST00000317402 CFC1BP0CG36 223 aa2.82□□□□□ -1.96
GEN1-201ENST00000317402 CFC1P0CG37 223 aa2.82□□□□□ -1.96
GEN1-201ENST00000317402 CTRLP40313 264 aa2.82□□□□□ -1.96
GEN1-201ENST00000317402 LINC00526Q96FQ7 95 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms