RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 RPL32P62910 135 aaKnown RBP10.48□□□□□ -0.73
SPAST-201ENST00000315285 TEN1Q86WV5 123 aa10.48□□□□□ -0.73
SPAST-201ENST00000315285 C20orf203Q8NBC4 194 aa10.48□□□□□ -0.73
SPAST-201ENST00000315285 SPANXDQ9BXN6 97 aa10.48□□□□□ -0.73
SPAST-201ENST00000315285 ICOSQ9Y6W8 199 aa10.48□□□□□ -0.73
SPAST-201ENST00000315285 TRBV7-3A0A075B6L6 115 aa10.48□□□□□ -0.73
SPAST-201ENST00000315285 TMEM61Q8N0U2 210 aa10.48□□□□□ -0.73
SPAST-201ENST00000315285 TANC2Q9HCD6 1990 aa10.47□□□□□ -0.73
SPAST-201ENST00000315285 TLN1Q9Y490 2541 aaKnown RBP10.47□□□□□ -0.73
SPAST-201ENST00000315285 GYPEP15421 78 aa10.47□□□□□ -0.73
SPAST-201ENST00000315285 LINC01620Q4KN68 170 aa10.47□□□□□ -0.73
SPAST-201ENST00000315285 ATP6V0E2Q8NHE4 81 aa10.47□□□□□ -0.73
SPAST-201ENST00000315285 NCOR2Q9Y618 2525 aa10.46□□□□□ -0.73
SPAST-201ENST00000315285 CRIP1P50238 77 aa10.46□□□□□ -0.73
SPAST-201ENST00000315285 DAND5Q8N907 189 aa10.46□□□□□ -0.73
SPAST-201ENST00000315285 SND1-IT1Q9HBX3 110 aa10.46□□□□□ -0.73
SPAST-201ENST00000315285 DSCAML1Q8TD84 2053 aa10.46□□□□□ -0.73
SPAST-201ENST00000315285 NAV2Q8IVL1 2488 aa10.46□□□□□ -0.74
SPAST-201ENST00000315285 EBI3Q14213 229 aa10.46□□□□□ -0.74
SPAST-201ENST00000315285 TRAV4A0A0B4J268 109 aa10.46□□□□□ -0.74
SPAST-201ENST00000315285 TNFRSF13BO14836 293 aaPredicted RBP10.46□□□□□ -0.74
SPAST-201ENST00000315285 OPRPNQ99935 248 aaPredicted RBP10.45□□□□□ -0.74
SPAST-201ENST00000315285 IGF1P05019 195 aa10.45□□□□□ -0.74
SPAST-201ENST00000315285 CRYBA4P53673 196 aa10.45□□□□□ -0.74
SPAST-201ENST00000315285 DSCR8Q96T75 97 aa10.45□□□□□ -0.74
SPAST-201ENST00000315285 NAV3Q8IVL0 2385 aa10.45□□□□□ -0.74
SPAST-201ENST00000315285 CCDC168Q8NDH2 2452 aa10.45□□□□□ -0.74
SPAST-201ENST00000315285 TRAV25A0A0B4J276 109 aa10.45□□□□□ -0.74
SPAST-201ENST00000315285 TP73-AS1Q9UF72 201 aa10.45□□□□□ -0.74
SPAST-201ENST00000315285 VSIG2Q96IQ7 327 aa10.45□□□□□ -0.74
SPAST-201ENST00000315285 PIEZO1Q92508 2521 aa10.44□□□□□ -0.74
SPAST-201ENST00000315285 DSCAMO60469 2012 aa10.44□□□□□ -0.74
SPAST-201ENST00000315285 ZFAND3Q9H8U3 227 aa10.44□□□□□ -0.74
SPAST-201ENST00000315285 ORMDL1Q9P0S3 153 aa10.44□□□□□ -0.74
SPAST-201ENST00000315285 COX7B2Q8TF08 81 aa10.44□□□□□ -0.74
SPAST-201ENST00000315285 C4orf3Q8WVX3 66 aa10.44□□□□□ -0.74
SPAST-201ENST00000315285 C19orf84I3L1E1 186 aa10.43□□□□□ -0.74
SPAST-201ENST00000315285 IGLV2-11P01706 119 aa10.43□□□□□ -0.74
SPAST-201ENST00000315285 LRP4O75096 1905 aa10.43□□□□□ -0.74
SPAST-201ENST00000315285 PTPRSQ13332 1948 aa10.43□□□□□ -0.74
SPAST-201ENST00000315285 MYO9AB2RTY4 2548 aa10.43□□□□□ -0.74
SPAST-201ENST00000315285 ATG2AQ2TAZ0 1938 aa10.43□□□□□ -0.74
SPAST-201ENST00000315285 IGHV1-58A0A0C4DH39 117 aa10.42□□□□□ -0.74
SPAST-201ENST00000315285 GOLGB1Q14789 3259 aaKnown RBP10.42□□□□□ -0.74
SPAST-201ENST00000315285 IGLV10-54A0A075B6I4 117 aa10.42□□□□□ -0.74
SPAST-201ENST00000315285 PIFOQ8TCI5 191 aa10.42□□□□□ -0.74
SPAST-201ENST00000315285 ACYP1P07311 99 aa10.42□□□□□ -0.74
SPAST-201ENST00000315285 FOXI1Q12951 378 aa10.42□□□□□ -0.74
SPAST-201ENST00000315285 C9orf66Q5T8R8 295 aa10.42□□□□□ -0.74
SPAST-201ENST00000315285 SMAD5-AS1Q9Y6J3 95 aa10.42□□□□□ -0.74
SPAST-201ENST00000315285 H0YGX0 51 aa10.42□□□□□ -0.74
SPAST-201ENST00000315285 IGHV3-30-3P0DP02 117 aa10.42□□□□□ -0.74
SPAST-201ENST00000315285 HIST2H2BCQ6DN03 193 aa10.42□□□□□ -0.74
SPAST-201ENST00000315285 TMEM126AQ9H061 195 aa10.42□□□□□ -0.74
SPAST-201ENST00000315285 RS1O15537 224 aa10.41□□□□□ -0.74
SPAST-201ENST00000315285 C20orf173Q96LM9 149 aa10.41□□□□□ -0.74
SPAST-201ENST00000315285 SORL1Q92673 2214 aa10.41□□□□□ -0.74
SPAST-201ENST00000315285 ATP5G1P05496 136 aa10.41□□□□□ -0.74
SPAST-201ENST00000315285 CEMP1Q6PRD7 247 aaPredicted RBP10.41□□□□□ -0.74
SPAST-201ENST00000315285 COX7A2LO14548 114 aa10.4□□□□□ -0.74
SPAST-201ENST00000315285 CENPFP49454 3210 aa10.4□□□□□ -0.74
SPAST-201ENST00000315285 CDK2AP2O75956 126 aa10.4□□□□□ -0.74
SPAST-201ENST00000315285 MRPL23Q16540 153 aaKnown RBP10.4□□□□□ -0.74
SPAST-201ENST00000315285 NDUFA11Q86Y39 141 aa10.4□□□□□ -0.74
SPAST-201ENST00000315285 ODF3Q96PU9 254 aa10.4□□□□□ -0.74
SPAST-201ENST00000315285 MAP6D1Q9H9H5 199 aa10.4□□□□□ -0.74
SPAST-201ENST00000315285 IGKV2D-24A0A075B6R9 120 aa10.4□□□□□ -0.75
SPAST-201ENST00000315285 RMI2Q96E14 147 aa10.4□□□□□ -0.75
SPAST-201ENST00000315285 C11orf71Q6IPW1 123 aa10.39□□□□□ -0.75
SPAST-201ENST00000315285 G3V4G9 280 aa10.39□□□□□ -0.75
SPAST-201ENST00000315285 K7EQG2 157 aa10.39□□□□□ -0.75
SPAST-201ENST00000315285 HHLA3Q9XRX5 114 aa10.39□□□□□ -0.75
SPAST-201ENST00000315285 U3KQK5 164 aa10.39□□□□□ -0.75
SPAST-201ENST00000315285 NEXN-AS1Q8NBZ9 246 aa10.39□□□□□ -0.75
SPAST-201ENST00000315285 HIVEP3Q5T1R4 2406 aa10.39□□□□□ -0.75
SPAST-201ENST00000315285 SPART-AS1P0CW21 52 aa10.39□□□□□ -0.75
SPAST-201ENST00000315285 ZFAND2AQ8N6M9 145 aa10.39□□□□□ -0.75
SPAST-201ENST00000315285 RNF185Q96GF1 192 aa10.39□□□□□ -0.75
SPAST-201ENST00000315285 Q6ZUT4 128 aa10.38□□□□□ -0.75
SPAST-201ENST00000315285 TMEM263Q8WUH6 116 aaKnown RBP10.38□□□□□ -0.75
SPAST-201ENST00000315285 CITED2Q99967 270 aaPredicted RBP10.38□□□□□ -0.75
SPAST-201ENST00000315285 ESM1Q9NQ30 184 aa10.38□□□□□ -0.75
SPAST-201ENST00000315285 P0DMU3 169 aa10.38□□□□□ -0.75
SPAST-201ENST00000315285 FAM231AP0DMU4 169 aa10.38□□□□□ -0.75
SPAST-201ENST00000315285 FAM231CP0DMU5 169 aa10.38□□□□□ -0.75
SPAST-201ENST00000315285 TRBV10-1A0A0K0K1A3 114 aa10.38□□□□□ -0.75
SPAST-201ENST00000315285 TRBV10-2A0A0K0K1G8 114 aa10.38□□□□□ -0.75
SPAST-201ENST00000315285 RBMY1FQ15415 496 aaKnown RBP10.38□□□□□ -0.75
SPAST-201ENST00000315285 LGALS9O00182 355 aa10.37□□□□□ -0.75
SPAST-201ENST00000315285 CLEC2BQ92478 149 aa10.37□□□□□ -0.75
SPAST-201ENST00000315285 PTH2Q96A98 100 aa10.37□□□□□ -0.75
SPAST-201ENST00000315285 C1orf43Q9BWL3 253 aa10.37□□□□□ -0.75
SPAST-201ENST00000315285 IGKV2D-26A0A0A0MRZ7 120 aa10.37□□□□□ -0.75
SPAST-201ENST00000315285 TM2D2Q9BX73 214 aa10.37□□□□□ -0.75
SPAST-201ENST00000315285 B5MCH6 92 aa10.36□□□□□ -0.75
SPAST-201ENST00000315285 H3BT86 120 aa10.36□□□□□ -0.75
SPAST-201ENST00000315285 Q8N6K4 173 aa10.36□□□□□ -0.75
SPAST-201ENST00000315285 TNRC6BQ9UPQ9 1833 aaKnown RBP10.36□□□□□ -0.75
SPAST-201ENST00000315285 TRACP01848 142 aa10.35□□□□□ -0.75
SPAST-201ENST00000315285 CAMK2N2Q96S95 79 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms