RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 RBMY1FQ15415 496 aaKnown RBP9.19□□□□□ -0.94
RNF4-201ENST00000314289 CD300EQ496F6 205 aaPredicted RBP9.19□□□□□ -0.94
RNF4-201ENST00000314289 RAX2Q96IS3 184 aa9.19□□□□□ -0.94
RNF4-201ENST00000314289 CITED2Q99967 270 aaPredicted RBP9.19□□□□□ -0.94
RNF4-201ENST00000314289 DPH3P1Q9H4G8 78 aa9.19□□□□□ -0.94
RNF4-201ENST00000314289 SPANXB1Q9NS25 103 aaPredicted RBP9.19□□□□□ -0.94
RNF4-201ENST00000314289 C2CD3Q4AC94 2353 aa9.19□□□□□ -0.94
RNF4-201ENST00000314289 E9PLD3 99 aa9.19□□□□□ -0.94
RNF4-201ENST00000314289 F5H697 171 aa9.19□□□□□ -0.94
RNF4-201ENST00000314289 C12orf74Q32Q52 190 aa9.19□□□□□ -0.94
RNF4-201ENST00000314289 FOXI2Q6ZQN5 318 aa9.19□□□□□ -0.94
RNF4-201ENST00000314289 TM2D2Q9BX73 214 aa9.19□□□□□ -0.94
RNF4-201ENST00000314289 Q8N8P6 123 aa9.18□□□□□ -0.94
RNF4-201ENST00000314289 CHTOPQ9Y3Y2 248 aaKnown RBP9.18□□□□□ -0.94
RNF4-201ENST00000314289 VWFP04275 2813 aa9.18□□□□□ -0.94
RNF4-201ENST00000314289 TMEM238LA0A1B0GVL6 79 aa9.18□□□□□ -0.94
RNF4-201ENST00000314289 INSL3P51460 131 aa9.18□□□□□ -0.94
RNF4-201ENST00000314289 J3QR89 54 aa9.17□□□□□ -0.94
RNF4-201ENST00000314289 SFTA2Q6UW10 78 aa9.17□□□□□ -0.94
RNF4-201ENST00000314289 SPAG8Q99932 426 aaPredicted RBP9.17□□□□□ -0.94
RNF4-201ENST00000314289 RBMY1BA6NDE4 496 aaKnown RBP9.17□□□□□ -0.94
RNF4-201ENST00000314289 RBMY1EA6NEQ0 496 aaKnown RBP9.17□□□□□ -0.94
RNF4-201ENST00000314289 F8W1H4 67 aa9.17□□□□□ -0.94
RNF4-201ENST00000314289 RBMY1DP0C7P1 496 aaKnown RBP9.17□□□□□ -0.94
RNF4-201ENST00000314289 LAGE3Q14657 143 aa9.17□□□□□ -0.94
RNF4-201ENST00000314289 PEMTQ9UBM1 199 aa9.17□□□□□ -0.94
RNF4-201ENST00000314289 TRBV7-9A0A0J9YWB2 115 aa9.16□□□□□ -0.94
RNF4-201ENST00000314289 LINC01006Q8NI28 216 aa9.16□□□□□ -0.94
RNF4-201ENST00000314289 HIVEP1P15822 2718 aa9.16□□□□□ -0.94
RNF4-201ENST00000314289 IGHV3-16A0A0C4DH30 117 aa9.16□□□□□ -0.94
RNF4-201ENST00000314289 SUMO2P61956 95 aaKnown RBP9.16□□□□□ -0.94
RNF4-201ENST00000314289 GAGE13Q4V321 117 aa9.16□□□□□ -0.94
RNF4-201ENST00000314289 SMIM2Q9BVW6 85 aa9.16□□□□□ -0.94
RNF4-201ENST00000314289 CYSLTR1Q9Y271 337 aa9.16□□□□□ -0.94
RNF4-201ENST00000314289 IGHV1OR15-1A0A075B7D0 117 aa9.16□□□□□ -0.94
RNF4-201ENST00000314289 IGHV3-73A0A0B4J1V6 119 aa9.16□□□□□ -0.94
RNF4-201ENST00000314289 LINC01546A6NGU7 62 aa9.16□□□□□ -0.94
RNF4-201ENST00000314289 DEFB114Q30KQ6 69 aa9.16□□□□□ -0.94
RNF4-201ENST00000314289 CFAP161Q6P656 301 aa9.16□□□□□ -0.94
RNF4-201ENST00000314289 TMEM86BQ8N661 226 aa9.16□□□□□ -0.94
RNF4-201ENST00000314289 NSD1Q96L73 2696 aaPredicted RBP9.15□□□□□ -0.94
RNF4-201ENST00000314289 TENM1Q9UKZ4 2725 aa9.15□□□□□ -0.94
RNF4-201ENST00000314289 CCL24O00175 119 aa9.15□□□□□ -0.94
RNF4-201ENST00000314289 MRAP2Q96G30 205 aa9.15□□□□□ -0.94
RNF4-201ENST00000314289 A0A087WX48 190 aa9.15□□□□□ -0.95
RNF4-201ENST00000314289 A0A1B0GWB2 263 aa9.15□□□□□ -0.95
RNF4-201ENST00000314289 LINC00315P59091 139 aa9.15□□□□□ -0.95
RNF4-201ENST00000314289 MAP6D1Q9H9H5 199 aa9.15□□□□□ -0.95
RNF4-201ENST00000314289 H3BMM0 161 aa9.14□□□□□ -0.95
RNF4-201ENST00000314289 SCGB2A2Q13296 93 aa9.14□□□□□ -0.95
RNF4-201ENST00000314289 KIF25-AS1Q9Y6Z4 181 aa9.14□□□□□ -0.95
RNF4-201ENST00000314289 OR11H12B2RN74 326 aa9.14□□□□□ -0.95
RNF4-201ENST00000314289 DUSP14O95147 198 aaKnown RBP9.14□□□□□ -0.95
RNF4-201ENST00000314289 RRN3P1Q2M238 152 aa9.14□□□□□ -0.95
RNF4-201ENST00000314289 ZNF876PQ49A33 203 aa9.14□□□□□ -0.95
RNF4-201ENST00000314289 SUMO4Q6EEV6 95 aa9.14□□□□□ -0.95
RNF4-201ENST00000314289 OR11H2Q8NH07 326 aa9.14□□□□□ -0.95
RNF4-201ENST00000314289 ZNF56Q15929 161 aa9.13□□□□□ -0.95
RNF4-201ENST00000314289 IGHV3OR16-12A0A075B7B8 117 aa9.13□□□□□ -0.95
RNF4-201ENST00000314289 NSUN5P1Q3KNT7 163 aa9.13□□□□□ -0.95
RNF4-201ENST00000314289 ATRQ13535 2644 aa9.13□□□□□ -0.95
RNF4-201ENST00000314289 PLNP26678 52 aa9.13□□□□□ -0.95
RNF4-201ENST00000314289 NBEAL2Q6ZNJ1 2754 aa9.13□□□□□ -0.95
RNF4-201ENST00000314289 A0A1B0GV72 72 aa9.12□□□□□ -0.95
RNF4-201ENST00000314289 MED14OSP0DP75 135 aa9.12□□□□□ -0.95
RNF4-201ENST00000314289 HLA-DRB4P13762 266 aa9.12□□□□□ -0.95
RNF4-201ENST00000314289 PGPEP1Q9NXJ5 209 aa9.12□□□□□ -0.95
RNF4-201ENST00000314289 HLA-DRB4X5D2U9 266 aa9.12□□□□□ -0.95
RNF4-201ENST00000314289 C9orf85Q96MD7 179 aa9.12□□□□□ -0.95
RNF4-201ENST00000314289 SCGB3A1Q96QR1 104 aa9.12□□□□□ -0.95
RNF4-201ENST00000314289 C20orf78Q9BR46 151 aa9.12□□□□□ -0.95
RNF4-201ENST00000314289 MRPL16Q9NX20 251 aaKnown RBP9.12□□□□□ -0.95
RNF4-201ENST00000314289 XCL2Q9UBD3 114 aa9.12□□□□□ -0.95
RNF4-201ENST00000314289 ZNF256Q9Y2P7 627 aaPredicted RBP9.12□□□□□ -0.95
RNF4-201ENST00000314289 TRBV7-3A0A075B6L6 115 aa9.11□□□□□ -0.95
RNF4-201ENST00000314289 MYMXA0A1B0GTQ4 84 aa9.11□□□□□ -0.95
RNF4-201ENST00000314289 F8VRH5 84 aa9.11□□□□□ -0.95
RNF4-201ENST00000314289 APOMO95445 188 aa9.11□□□□□ -0.95
RNF4-201ENST00000314289 SCGB1A1P11684 91 aa9.11□□□□□ -0.95
RNF4-201ENST00000314289 PROK1P58294 105 aa9.11□□□□□ -0.95
RNF4-201ENST00000314289 TAL2Q16559 108 aa9.11□□□□□ -0.95
RNF4-201ENST00000314289 TEX29Q8N6K0 151 aa9.11□□□□□ -0.95
RNF4-201ENST00000314289 ODF3Q96PU9 254 aa9.11□□□□□ -0.95
RNF4-201ENST00000314289 H7C1H1 209 aa9.11□□□□□ -0.95
RNF4-201ENST00000314289 SPATA25Q9BR10 227 aa9.11□□□□□ -0.95
RNF4-201ENST00000314289 WFDC10AQ9H1F0 79 aa9.11□□□□□ -0.95
RNF4-201ENST00000314289 LOC107984156A0A0G2JMH3 177 aa9.11□□□□□ -0.95
RNF4-201ENST00000314289 NXPH4O95158 308 aa9.11□□□□□ -0.95
RNF4-201ENST00000314289 ODF3L2Q3SX64 289 aa9.11□□□□□ -0.95
RNF4-201ENST00000314289 SCGB1D4Q6XE38 83 aa9.11□□□□□ -0.95
RNF4-201ENST00000314289 ARL17AQ8IVW1 177 aa9.11□□□□□ -0.95
RNF4-201ENST00000314289 CLUHP3Q96NS8 147 aa9.11□□□□□ -0.95
RNF4-201ENST00000314289 RNASE1P07998 156 aaKnown RBP9.1□□□□□ -0.95
RNF4-201ENST00000314289 PRO0461Q9UI25 63 aa9.1□□□□□ -0.95
RNF4-201ENST00000314289 LY6G6DO95868 133 aa9.1□□□□□ -0.95
RNF4-201ENST00000314289 CRYGDP07320 174 aa9.1□□□□□ -0.95
RNF4-201ENST00000314289 P0DMU3 169 aa9.1□□□□□ -0.95
RNF4-201ENST00000314289 FAM231AP0DMU4 169 aa9.1□□□□□ -0.95
RNF4-201ENST00000314289 FAM231CP0DMU5 169 aa9.1□□□□□ -0.95
RNF4-201ENST00000314289 ZNF418Q8TF45 676 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 1913.2 ms