RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.26□□□□□ -0.77
DDX54-202ENST00000314045 IGKV2-29A2NJV5 120 aaPredicted RBP10.26□□□□□ -0.77
DDX54-202ENST00000314045 TP53TG3Q9ULZ0 132 aa10.26□□□□□ -0.77
DDX54-202ENST00000314045 DEFB4AO15263 64 aa10.25□□□□□ -0.77
DDX54-202ENST00000314045 ATP5G1P05496 136 aa10.25□□□□□ -0.77
DDX54-202ENST00000314045 ZFP2Q6ZN57 461 aa10.24□□□□□ -0.77
DDX54-202ENST00000314045 DNAJC30Q96LL9 226 aa10.24□□□□□ -0.77
DDX54-202ENST00000314045 ESM1Q9NQ30 184 aa10.24□□□□□ -0.77
DDX54-202ENST00000314045 DSPP15924 2871 aaKnown RBP10.24□□□□□ -0.77
DDX54-202ENST00000314045 GYPEP15421 78 aa10.24□□□□□ -0.77
DDX54-202ENST00000314045 TMEM263Q8WUH6 116 aaKnown RBP10.24□□□□□ -0.77
DDX54-202ENST00000314045 HELZ2Q9BYK8 2649 aaKnown RBP10.24□□□□□ -0.77
DDX54-202ENST00000314045 VPS13AQ96RL7 3174 aa10.24□□□□□ -0.77
DDX54-202ENST00000314045 TET2Q6N021 2002 aaPredicted RBP10.24□□□□□ -0.77
DDX54-202ENST00000314045 NAA38Q9BRA0 125 aaKnown RBP10.24□□□□□ -0.77
DDX54-202ENST00000314045 ANGP03950 147 aaKnown RBP10.23□□□□□ -0.77
DDX54-202ENST00000314045 K7EQD1 137 aa10.23□□□□□ -0.77
DDX54-202ENST00000314045 ZNF479Q96JC4 524 aa10.23□□□□□ -0.77
DDX54-202ENST00000314045 GATD1Q8NB37 220 aa10.23□□□□□ -0.77
DDX54-202ENST00000314045 CFAP46Q8IYW2 2715 aa10.22□□□□□ -0.77
DDX54-202ENST00000314045 MRPS12O15235 138 aaKnown RBP10.22□□□□□ -0.77
DDX54-202ENST00000314045 MAJINQ3KP22 176 aa10.22□□□□□ -0.77
DDX54-202ENST00000314045 RBMY1BA6NDE4 496 aaKnown RBP10.22□□□□□ -0.77
DDX54-202ENST00000314045 RBMY1EA6NEQ0 496 aaKnown RBP10.22□□□□□ -0.77
DDX54-202ENST00000314045 RBMY1DP0C7P1 496 aaKnown RBP10.22□□□□□ -0.77
DDX54-202ENST00000314045 RBMY1A1P0DJD3 496 aaKnown RBP10.22□□□□□ -0.77
DDX54-202ENST00000314045 RBMY1CP0DJD4 496 aa10.22□□□□□ -0.77
DDX54-202ENST00000314045 ATP6V0E2Q8NHE4 81 aa10.22□□□□□ -0.77
DDX54-202ENST00000314045 DCANP1Q8TF63 244 aa10.22□□□□□ -0.77
DDX54-202ENST00000314045 ERG28Q9UKR5 140 aa10.22□□□□□ -0.77
DDX54-202ENST00000314045 COX8AP10176 69 aa10.21□□□□□ -0.77
DDX54-202ENST00000314045 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.21□□□□□ -0.77
DDX54-202ENST00000314045 TRBV7-3A0A075B6L6 115 aa10.21□□□□□ -0.78
DDX54-202ENST00000314045 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.21□□□□□ -0.78
DDX54-202ENST00000314045 RPL39P62891 51 aaKnown RBP10.21□□□□□ -0.78
DDX54-202ENST00000314045 BRI3O95415 125 aa10.2□□□□□ -0.78
DDX54-202ENST00000314045 EDN2P20800 178 aa10.2□□□□□ -0.78
DDX54-202ENST00000314045 SPANXA1Q9NS26 97 aa10.2□□□□□ -0.78
DDX54-202ENST00000314045 A0A1B0GWB2 263 aa10.2□□□□□ -0.78
DDX54-202ENST00000314045 MRPL23Q16540 153 aaKnown RBP10.2□□□□□ -0.78
DDX54-202ENST00000314045 CLPSL2Q6UWE3 100 aa10.2□□□□□ -0.78
DDX54-202ENST00000314045 Q6ZTI0 123 aa10.2□□□□□ -0.78
DDX54-202ENST00000314045 NDUFA12Q9UI09 145 aa10.2□□□□□ -0.78
DDX54-202ENST00000314045 ZNF580Q9UK33 172 aa10.2□□□□□ -0.78
DDX54-202ENST00000314045 AKAP13Q12802 2813 aa10.2□□□□□ -0.78
DDX54-202ENST00000314045 SHISA2Q6UWI4 295 aa10.2□□□□□ -0.78
DDX54-202ENST00000314045 HHLA3Q9XRX5 114 aa10.2□□□□□ -0.78
DDX54-202ENST00000314045 PSCAO43653 123 aa10.19□□□□□ -0.78
DDX54-202ENST00000314045 DAZ2Q13117 558 aaKnown RBP10.19□□□□□ -0.78
DDX54-202ENST00000314045 DAZ4Q86SG3 579 aaKnown RBP10.19□□□□□ -0.78
DDX54-202ENST00000314045 DAZ3Q9NR90 486 aaKnown RBP10.19□□□□□ -0.78
DDX54-202ENST00000314045 SAMD5Q5TGI4 173 aa10.19□□□□□ -0.78
DDX54-202ENST00000314045 J3QQQ9 107 aa10.19□□□□□ -0.78
DDX54-202ENST00000314045 NDUFA7O95182 113 aa10.19□□□□□ -0.78
DDX54-202ENST00000314045 YPEL4Q96NS1 127 aa10.19□□□□□ -0.78
DDX54-202ENST00000314045 C11orf21Q9P2W6 132 aa10.19□□□□□ -0.78
DDX54-202ENST00000314045 TEX48A0A1B0GUV7 120 aa10.19□□□□□ -0.78
DDX54-202ENST00000314045 HERVK_113P63121 156 aa10.19□□□□□ -0.78
DDX54-202ENST00000314045 PRR9Q5T870 116 aa10.19□□□□□ -0.78
DDX54-202ENST00000314045 Q6ZQT7 251 aa10.18□□□□□ -0.78
DDX54-202ENST00000314045 LINC00482Q8N8I6 264 aa10.18□□□□□ -0.78
DDX54-202ENST00000314045 A0A0J9YXV3 536 aa10.18□□□□□ -0.78
DDX54-202ENST00000314045 LINC01545Q5VT33 79 aa10.18□□□□□ -0.78
DDX54-202ENST00000314045 TDRG1Q3Y452 100 aa10.17□□□□□ -0.78
DDX54-202ENST00000314045 S100A7L2Q5SY68 101 aa10.17□□□□□ -0.78
DDX54-202ENST00000314045 KLLNB2CW77 178 aa10.17□□□□□ -0.78
DDX54-202ENST00000314045 SPINK8P0C7L1 97 aa10.17□□□□□ -0.78
DDX54-202ENST00000314045 WFDC10AQ9H1F0 79 aa10.17□□□□□ -0.78
DDX54-202ENST00000314045 PFN2P35080 140 aa10.16□□□□□ -0.78
DDX54-202ENST00000314045 LAMA1P25391 3075 aa10.16□□□□□ -0.78
DDX54-202ENST00000314045 ZNF561-AS1K7EIQ3 104 aa10.16□□□□□ -0.78
DDX54-202ENST00000314045 TRBV10-1A0A0K0K1A3 114 aa10.16□□□□□ -0.78
DDX54-202ENST00000314045 XCL1P47992 114 aa10.16□□□□□ -0.78
DDX54-202ENST00000314045 P0DMU3 169 aa10.15□□□□□ -0.78
DDX54-202ENST00000314045 FAM231AP0DMU4 169 aa10.15□□□□□ -0.78
DDX54-202ENST00000314045 FAM231CP0DMU5 169 aa10.15□□□□□ -0.78
DDX54-202ENST00000314045 FGF6P10767 208 aa10.15□□□□□ -0.78
DDX54-202ENST00000314045 PCP2Q8IVA1 136 aa10.15□□□□□ -0.78
DDX54-202ENST00000314045 PRO0255Q9UI72 69 aa10.15□□□□□ -0.78
DDX54-202ENST00000314045 ICOSQ9Y6W8 199 aa10.15□□□□□ -0.78
DDX54-202ENST00000314045 TRAV4A0A0B4J268 109 aa10.15□□□□□ -0.78
DDX54-202ENST00000314045 ANKRD39Q53RE8 183 aa10.15□□□□□ -0.78
DDX54-202ENST00000314045 MRPL52Q86TS9 123 aaKnown RBP10.15□□□□□ -0.78
DDX54-202ENST00000314045 UBE2WQ96B02 151 aa10.14□□□□□ -0.79
DDX54-202ENST00000314045 USP24Q9UPU5 2620 aa10.14□□□□□ -0.79
DDX54-202ENST00000314045 C20orf203Q8NBC4 194 aa10.14□□□□□ -0.79
DDX54-202ENST00000314045 LEPROTO15243 131 aa10.14□□□□□ -0.79
DDX54-202ENST00000314045 AMTNQ6UX39 209 aa10.14□□□□□ -0.79
DDX54-202ENST00000314045 PGPEP1Q9NXJ5 209 aa10.14□□□□□ -0.79
DDX54-202ENST00000314045 RNASE3P12724 160 aaKnown RBP10.14□□□□□ -0.79
DDX54-202ENST00000314045 C5orf38Q86SI9 138 aa10.14□□□□□ -0.79
DDX54-202ENST00000314045 FAM222AQ5U5X8 452 aa10.13□□□□□ -0.79
DDX54-202ENST00000314045 TOMM6Q96B49 74 aa10.13□□□□□ -0.79
DDX54-202ENST00000314045 TIMM17AQ99595 171 aa10.13□□□□□ -0.79
DDX54-202ENST00000314045 COL6A3P12111 3177 aa10.13□□□□□ -0.79
DDX54-202ENST00000314045 FLNAP21333 2647 aaKnown RBP10.13□□□□□ -0.79
DDX54-202ENST00000314045 SH2D6Q7Z4S9 175 aa10.13□□□□□ -0.79
DDX54-202ENST00000314045 Q6ZVH6 145 aa10.13□□□□□ -0.79
DDX54-202ENST00000314045 ODF3L2Q3SX64 289 aa10.12□□□□□ -0.79
DDX54-202ENST00000314045 SMIM9A6NGZ8 99 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms