RNA–Protein interactions for RNA: ENST00000313401.3

CDK5R1-201, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5R1, Length 4,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-201ENST00000313401 IGKV2-29A2NJV5 120 aaPredicted RBP13.86□□□□□ -0.19
CDK5R1-201ENST00000313401 LGALS1P09382 135 aaKnown RBP13.86□□□□□ -0.19
CDK5R1-201ENST00000313401 TEX29Q8N6K0 151 aa13.86□□□□□ -0.19
CDK5R1-201ENST00000313401 AZU1P20160 251 aa13.86□□□□□ -0.19
CDK5R1-201ENST00000313401 HIGD1BQ9P298 99 aa13.86□□□□□ -0.19
CDK5R1-201ENST00000313401 ZNF415Q09FC8 603 aa13.86□□□□□ -0.19
CDK5R1-201ENST00000313401 PTH2Q96A98 100 aa13.86□□□□□ -0.19
CDK5R1-201ENST00000313401 F8W1H4 67 aa13.85□□□□□ -0.19
CDK5R1-201ENST00000313401 TMEM141Q96I45 108 aa13.85□□□□□ -0.19
CDK5R1-201ENST00000313401 A6NDX4 124 aa13.85□□□□□ -0.19
CDK5R1-201ENST00000313401 GAGE12HA6NDE8 117 aa13.85□□□□□ -0.19
CDK5R1-201ENST00000313401 TMEM262E9PQX1 116 aa13.85□□□□□ -0.19
CDK5R1-201ENST00000313401 HHLA3Q9XRX5 114 aa13.85□□□□□ -0.19
CDK5R1-201ENST00000313401 TAL2Q16559 108 aa13.84□□□□□ -0.19
CDK5R1-201ENST00000313401 DSCR9P59020 149 aa13.84□□□□□ -0.19
CDK5R1-201ENST00000313401 SRSF2Q01130 221 aaKnown RBP13.84□□□□□ -0.19
CDK5R1-201ENST00000313401 SPINK8P0C7L1 97 aa13.83□□□□□ -0.2
CDK5R1-201ENST00000313401 H3BUA1 57 aa13.83□□□□□ -0.2
CDK5R1-201ENST00000313401 AVPP01185 164 aa13.83□□□□□ -0.2
CDK5R1-201ENST00000313401 ZNRF2Q8NHG8 242 aa13.83□□□□□ -0.2
CDK5R1-201ENST00000313401 YAE1D1Q9NRH1 226 aa13.83□□□□□ -0.2
CDK5R1-201ENST00000313401 COL12A1Q99715 3063 aa13.83□□□□□ -0.2
CDK5R1-201ENST00000313401 NSUN5P1Q3KNT7 163 aa13.82□□□□□ -0.2
CDK5R1-201ENST00000313401 Q96MF0 132 aa13.82□□□□□ -0.2
CDK5R1-201ENST00000313401 PRO1854Q9UHT4 67 aa13.82□□□□□ -0.2
CDK5R1-201ENST00000313401 SCGB1A1P11684 91 aa13.82□□□□□ -0.2
CDK5R1-201ENST00000313401 OR13C6PQ8NH95 151 aa13.82□□□□□ -0.2
CDK5R1-201ENST00000313401 RNASE3P12724 160 aaKnown RBP13.82□□□□□ -0.2
CDK5R1-201ENST00000313401 E9PLD3 99 aa13.81□□□□□ -0.2
CDK5R1-201ENST00000313401 M0R2P5 195 aa13.81□□□□□ -0.2
CDK5R1-201ENST00000313401 C11orf68Q9H3H3 251 aaKnown RBP13.81□□□□□ -0.2
CDK5R1-201ENST00000313401 GAGE12JA6NER3 117 aa13.81□□□□□ -0.2
CDK5R1-201ENST00000313401 GAGE4Q13068 117 aa13.81□□□□□ -0.2
CDK5R1-201ENST00000313401 GAGE5Q13069 117 aa13.81□□□□□ -0.2
CDK5R1-201ENST00000313401 NDUFA12Q9UI09 145 aa13.81□□□□□ -0.2
CDK5R1-201ENST00000313401 A4D1N5 150 aa13.81□□□□□ -0.2
CDK5R1-201ENST00000313401 VPREB3Q9UKI3 123 aa13.81□□□□□ -0.2
CDK5R1-201ENST00000313401 FASNP49327 2511 aaKnown RBP13.8□□□□□ -0.2
CDK5R1-201ENST00000313401 TRAV12-1A0A0B4J245 112 aa13.8□□□□□ -0.2
CDK5R1-201ENST00000313401 TSPAN13O95857 204 aa13.8□□□□□ -0.2
CDK5R1-201ENST00000313401 CNFNQ9BYD5 112 aa13.8□□□□□ -0.2
CDK5R1-201ENST00000313401 GATA3P23771 443 aa13.8□□□□□ -0.2
CDK5R1-201ENST00000313401 INSP01308 110 aa13.79□□□□□ -0.2
CDK5R1-201ENST00000313401 NEXN-AS1Q8NBZ9 246 aa13.79□□□□□ -0.2
CDK5R1-201ENST00000313401 ATP6V0BQ99437 205 aa13.79□□□□□ -0.2
CDK5R1-201ENST00000313401 TRGV4A0A0C4DH28 118 aa13.79□□□□□ -0.2
CDK5R1-201ENST00000313401 A0A0J9YX75 114 aa13.79□□□□□ -0.2
CDK5R1-201ENST00000313401 DAND5Q8N907 189 aa13.79□□□□□ -0.2
CDK5R1-201ENST00000313401 TRAV8-3A0A0A6YYJ7 113 aa13.78□□□□□ -0.2
CDK5R1-201ENST00000313401 LINC01619G3V211 115 aa13.78□□□□□ -0.2
CDK5R1-201ENST00000313401 G3V4G9 280 aa13.78□□□□□ -0.2
CDK5R1-201ENST00000313401 PROK1P58294 105 aa13.78□□□□□ -0.2
CDK5R1-201ENST00000313401 RNASE1P07998 156 aaKnown RBP13.78□□□□□ -0.2
CDK5R1-201ENST00000313401 TMEM101Q96IK0 257 aa13.78□□□□□ -0.2
CDK5R1-201ENST00000313401 CHCHD5Q9BSY4 110 aa13.78□□□□□ -0.2
CDK5R1-201ENST00000313401 GAGE2BQ13066 116 aa13.78□□□□□ -0.2
CDK5R1-201ENST00000313401 GAGE2EQ4V326 116 aa13.78□□□□□ -0.2
CDK5R1-201ENST00000313401 GAGE2DQ9UEU5 116 aa13.78□□□□□ -0.2
CDK5R1-201ENST00000313401 RPL36AP83881 106 aaKnown RBP13.77□□□□□ -0.21
CDK5R1-201ENST00000313401 GPHB5Q86YW7 130 aa13.77□□□□□ -0.21
CDK5R1-201ENST00000313401 RPL36ALQ969Q0 106 aaKnown RBP13.77□□□□□ -0.21
CDK5R1-201ENST00000313401 COL27A1Q8IZC6 1860 aaPredicted RBP13.77□□□□□ -0.21
CDK5R1-201ENST00000313401 TMEM61Q8N0U2 210 aa13.77□□□□□ -0.21
CDK5R1-201ENST00000313401 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.76□□□□□ -0.21
CDK5R1-201ENST00000313401 C10orf126Q8N4M7 172 aa13.76□□□□□ -0.21
CDK5R1-201ENST00000313401 ELANEP08246 267 aa13.76□□□□□ -0.21
CDK5R1-201ENST00000313401 PRIMA1Q86XR5 153 aa13.76□□□□□ -0.21
CDK5R1-201ENST00000313401 C2orf82Q6UX34 121 aa13.76□□□□□ -0.21
CDK5R1-201ENST00000313401 MUSTN1Q8IVN3 82 aa13.76□□□□□ -0.21
CDK5R1-201ENST00000313401 TM2D2Q9BX73 214 aa13.76□□□□□ -0.21
CDK5R1-201ENST00000313401 U3KQE9 123 aa13.75□□□□□ -0.21
CDK5R1-201ENST00000313401 PF4P02776 101 aa13.75□□□□□ -0.21
CDK5R1-201ENST00000313401 ZFAND6Q6FIF0 208 aa13.75□□□□□ -0.21
CDK5R1-201ENST00000313401 DEFB130BP0DP73 79 aa13.74□□□□□ -0.21
CDK5R1-201ENST00000313401 DEFB130AP0DP74 79 aa13.74□□□□□ -0.21
CDK5R1-201ENST00000313401 PIFOQ8TCI5 191 aa13.74□□□□□ -0.21
CDK5R1-201ENST00000313401 K7EMT4 169 aa13.73□□□□□ -0.21
CDK5R1-201ENST00000313401 GAGE7O76087 117 aa13.73□□□□□ -0.21
CDK5R1-201ENST00000313401 GAGE12FP0CL80 117 aa13.73□□□□□ -0.21
CDK5R1-201ENST00000313401 GAGE12GP0CL81 117 aa13.73□□□□□ -0.21
CDK5R1-201ENST00000313401 GAGE12IP0CL82 117 aa13.73□□□□□ -0.21
CDK5R1-201ENST00000313401 HTN3P15516 51 aa13.73□□□□□ -0.21
CDK5R1-201ENST00000313401 SPAG8Q99932 426 aaPredicted RBP13.73□□□□□ -0.21
CDK5R1-201ENST00000313401 SLC25A20O43772 301 aa13.73□□□□□ -0.21
CDK5R1-201ENST00000313401 C18orf65Q6ZTR6 163 aa13.72□□□□□ -0.21
CDK5R1-201ENST00000313401 CFC1BP0CG36 223 aa13.71□□□□□ -0.21
CDK5R1-201ENST00000313401 CFC1P0CG37 223 aa13.71□□□□□ -0.21
CDK5R1-201ENST00000313401 NTN5Q8WTR8 489 aaPredicted RBP13.71□□□□□ -0.21
CDK5R1-201ENST00000313401 TRBV7-9A0A0J9YWB2 115 aa13.71□□□□□ -0.21
CDK5R1-201ENST00000313401 RHOHQ15669 191 aa13.71□□□□□ -0.22
CDK5R1-201ENST00000313401 C20orf203Q8NBC4 194 aa13.71□□□□□ -0.22
CDK5R1-201ENST00000313401 LINC00158P58513 81 aa13.71□□□□□ -0.22
CDK5R1-201ENST00000313401 ATXN8Q156A1 80 aa13.71□□□□□ -0.22
CDK5R1-201ENST00000313401 PPDPFLQ8WWR9 84 aa13.71□□□□□ -0.22
CDK5R1-201ENST00000313401 IGLV2-18A0A075B6J9 118 aa13.7□□□□□ -0.22
CDK5R1-201ENST00000313401 INSL3P51460 131 aa13.7□□□□□ -0.22
CDK5R1-201ENST00000313401 COX8CQ7Z4L0 72 aa13.7□□□□□ -0.22
CDK5R1-201ENST00000313401 RELNP78509 3460 aa13.7□□□□□ -0.22
CDK5R1-201ENST00000313401 ASH1LQ9NR48 2969 aaKnown RBP13.7□□□□□ -0.22
CDK5R1-201ENST00000313401 TIMM17AQ99595 171 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms