RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 KIR2DL5AQ8N109 375 aa12.04□□□□□ -0.48
CLCF1-201ENST00000312438 KIR2DL5BQ8NHK3 375 aa12.04□□□□□ -0.48
CLCF1-201ENST00000312438 C18orf15Q96N68 181 aa12.04□□□□□ -0.48
CLCF1-201ENST00000312438 OVOL2Q9BRP0 275 aa12.04□□□□□ -0.48
CLCF1-201ENST00000312438 NOP10Q9NPE3 64 aaKnown RBP12.04□□□□□ -0.48
CLCF1-201ENST00000312438 PAM16Q9Y3D7 125 aa12.04□□□□□ -0.48
CLCF1-201ENST00000312438 PLAC8L1A1L4L8 177 aa12.03□□□□□ -0.48
CLCF1-201ENST00000312438 OR4C5Q8NGB2 326 aa12.03□□□□□ -0.48
CLCF1-201ENST00000312438 TRAV9-2A0A087WT02 112 aa12.02□□□□□ -0.48
CLCF1-201ENST00000312438 IGHV3-53P01767 116 aa12.02□□□□□ -0.48
CLCF1-201ENST00000312438 LGALS9CQ6DKI2 356 aa12.02□□□□□ -0.48
CLCF1-201ENST00000312438 NEGR1Q7Z3B1 354 aa12.02□□□□□ -0.48
CLCF1-201ENST00000312438 TOMM6Q96B49 74 aa12.02□□□□□ -0.48
CLCF1-201ENST00000312438 APOC4P55056 127 aa12.02□□□□□ -0.49
CLCF1-201ENST00000312438 Q6ZTI0 123 aa12.02□□□□□ -0.49
CLCF1-201ENST00000312438 SMIM9A6NGZ8 99 aa12.01□□□□□ -0.49
CLCF1-201ENST00000312438 LINC01549A6NIU2 74 aa12.01□□□□□ -0.49
CLCF1-201ENST00000312438 PRSS1P07477 247 aa12.01□□□□□ -0.49
CLCF1-201ENST00000312438 Q6ZSN1 163 aa12.01□□□□□ -0.49
CLCF1-201ENST00000312438 TNFRSF18Q9Y5U5 241 aa12.01□□□□□ -0.49
CLCF1-201ENST00000312438 TRAV4A0A0B4J268 109 aa12□□□□□ -0.49
CLCF1-201ENST00000312438 I3L3M4 83 aa12□□□□□ -0.49
CLCF1-201ENST00000312438 SPATA45Q537H7 98 aa12□□□□□ -0.49
CLCF1-201ENST00000312438 C2orf66Q6UXQ4 117 aa12□□□□□ -0.49
CLCF1-201ENST00000312438 DDTP30046 118 aa12□□□□□ -0.49
CLCF1-201ENST00000312438 OXLD1Q5BKU9 147 aa12□□□□□ -0.49
CLCF1-201ENST00000312438 DNAJC30Q96LL9 226 aa12□□□□□ -0.49
CLCF1-201ENST00000312438 SCGB3A1Q96QR1 104 aa12□□□□□ -0.49
CLCF1-201ENST00000312438 NOTCH3Q9UM47 2321 aa11.99□□□□□ -0.49
CLCF1-201ENST00000312438 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.99□□□□□ -0.49
CLCF1-201ENST00000312438 CIDEAO60543 219 aa11.99□□□□□ -0.49
CLCF1-201ENST00000312438 P0DMU3 169 aa11.99□□□□□ -0.49
CLCF1-201ENST00000312438 FAM231AP0DMU4 169 aa11.99□□□□□ -0.49
CLCF1-201ENST00000312438 FAM231CP0DMU5 169 aa11.99□□□□□ -0.49
CLCF1-201ENST00000312438 PMCHL2Q9BQD1 86 aa11.99□□□□□ -0.49
CLCF1-201ENST00000312438 LINC00587B1AMM8 73 aa11.98□□□□□ -0.49
CLCF1-201ENST00000312438 MAJINQ3KP22 176 aa11.98□□□□□ -0.49
CLCF1-201ENST00000312438 ZNF479Q96JC4 524 aa11.98□□□□□ -0.49
CLCF1-201ENST00000312438 CYSLTR1Q9Y271 337 aa11.98□□□□□ -0.49
CLCF1-201ENST00000312438 RHOHQ15669 191 aa11.97□□□□□ -0.49
CLCF1-201ENST00000312438 ZMAT5Q9UDW3 170 aaKnown RBP11.97□□□□□ -0.49
CLCF1-201ENST00000312438 VWFP04275 2813 aa11.97□□□□□ -0.49
CLCF1-201ENST00000312438 TRGV2A0A075B6R0 118 aa11.97□□□□□ -0.49
CLCF1-201ENST00000312438 GAGE12BA1L429 117 aa11.97□□□□□ -0.49
CLCF1-201ENST00000312438 HSBP1L1C9JCN9 74 aa11.97□□□□□ -0.49
CLCF1-201ENST00000312438 GAGE7O76087 117 aa11.97□□□□□ -0.49
CLCF1-201ENST00000312438 GAGE12FP0CL80 117 aa11.97□□□□□ -0.49
CLCF1-201ENST00000312438 GAGE12GP0CL81 117 aa11.97□□□□□ -0.49
CLCF1-201ENST00000312438 GAGE12IP0CL82 117 aa11.97□□□□□ -0.49
CLCF1-201ENST00000312438 IGHV4-30-4P0DP06 118 aa11.97□□□□□ -0.49
CLCF1-201ENST00000312438 RIPPLY3P57055 190 aa11.97□□□□□ -0.49
CLCF1-201ENST00000312438 Q6ZN92 141 aa11.97□□□□□ -0.49
CLCF1-201ENST00000312438 ERASQ7Z444 233 aa11.97□□□□□ -0.49
CLCF1-201ENST00000312438 NEXN-AS1Q8NBZ9 246 aa11.97□□□□□ -0.49
CLCF1-201ENST00000312438 X6R8D5 127 aa11.97□□□□□ -0.49
CLCF1-201ENST00000312438 DEFB104AQ8WTQ1 72 aa11.96□□□□□ -0.49
CLCF1-201ENST00000312438 TSHBP01222 138 aa11.95□□□□□ -0.5
CLCF1-201ENST00000312438 EGFEM1PQ0D2K5 195 aa11.95□□□□□ -0.5
CLCF1-201ENST00000312438 MIEN1Q9BRT3 115 aa11.95□□□□□ -0.5
CLCF1-201ENST00000312438 EMP1P54849 157 aa11.95□□□□□ -0.5
CLCF1-201ENST00000312438 ODF1Q14990 250 aa11.95□□□□□ -0.5
CLCF1-201ENST00000312438 ZMAT4Q9H898 229 aa11.95□□□□□ -0.5
CLCF1-201ENST00000312438 Q9UF83 564 aa11.95□□□□□ -0.5
CLCF1-201ENST00000312438 TP53TG1Q9Y2A0 90 aa11.95□□□□□ -0.5
CLCF1-201ENST00000312438 TRBV10-1A0A0K0K1A3 114 aa11.94□□□□□ -0.5
CLCF1-201ENST00000312438 hDV102S1A0JD36 115 aa11.94□□□□□ -0.5
CLCF1-201ENST00000312438 DKK2Q9UBU2 259 aa11.94□□□□□ -0.5
CLCF1-201ENST00000312438 FBN1P35555 2871 aaKnown RBP11.94□□□□□ -0.5
CLCF1-201ENST00000312438 TRAV12-1A0A0B4J245 112 aa11.93□□□□□ -0.5
CLCF1-201ENST00000312438 KRTAP10-11P60412 298 aa11.93□□□□□ -0.5
CLCF1-201ENST00000312438 DEFB135Q30KP9 77 aa11.93□□□□□ -0.5
CLCF1-201ENST00000312438 A0A087WX48 190 aa11.93□□□□□ -0.5
CLCF1-201ENST00000312438 IGIPA6NJ69 53 aa11.93□□□□□ -0.5
CLCF1-201ENST00000312438 IGLC3P0DOY3 106 aa11.93□□□□□ -0.5
CLCF1-201ENST00000312438 TMEM141Q96I45 108 aa11.93□□□□□ -0.5
CLCF1-201ENST00000312438 TRBV7-3A0A075B6L6 115 aa11.92□□□□□ -0.5
CLCF1-201ENST00000312438 K7EQD1 137 aa11.92□□□□□ -0.5
CLCF1-201ENST00000312438 C20orf203Q8NBC4 194 aa11.92□□□□□ -0.5
CLCF1-201ENST00000312438 OR11H2Q8NH07 326 aa11.92□□□□□ -0.5
CLCF1-201ENST00000312438 TIMM17AQ99595 171 aa11.92□□□□□ -0.5
CLCF1-201ENST00000312438 UQCR10Q9UDW1 63 aa11.92□□□□□ -0.5
CLCF1-201ENST00000312438 RPL39P62891 51 aaKnown RBP11.91□□□□□ -0.5
CLCF1-201ENST00000312438 RPL36AP83881 106 aaKnown RBP11.91□□□□□ -0.5
CLCF1-201ENST00000312438 LINC00612Q8N6U2 182 aa11.91□□□□□ -0.5
CLCF1-201ENST00000312438 SLC25A29Q8N8R3 303 aa11.91□□□□□ -0.5
CLCF1-201ENST00000312438 ZNRF2Q8NHG8 242 aa11.91□□□□□ -0.5
CLCF1-201ENST00000312438 RPL36ALQ969Q0 106 aaKnown RBP11.91□□□□□ -0.5
CLCF1-201ENST00000312438 TRBV6-4A0A1B0GX49 114 aa11.9□□□□□ -0.5
CLCF1-201ENST00000312438 DEFA6Q01524 100 aa11.9□□□□□ -0.5
CLCF1-201ENST00000312438 BAALCQ8WXS3 180 aa11.9□□□□□ -0.5
CLCF1-201ENST00000312438 TRGV4A0A0C4DH28 118 aa11.9□□□□□ -0.5
CLCF1-201ENST00000312438 A8MZ25 164 aa11.9□□□□□ -0.5
CLCF1-201ENST00000312438 DPM2O94777 84 aa11.9□□□□□ -0.5
CLCF1-201ENST00000312438 IGKCP01834 107 aa11.9□□□□□ -0.5
CLCF1-201ENST00000312438 RNF183Q96D59 192 aa11.9□□□□□ -0.5
CLCF1-201ENST00000312438 C14orf144Q96I85 54 aa11.9□□□□□ -0.5
CLCF1-201ENST00000312438 DEFB130BP0DP73 79 aa11.89□□□□□ -0.51
CLCF1-201ENST00000312438 DEFB130AP0DP74 79 aa11.89□□□□□ -0.51
CLCF1-201ENST00000312438 MRPL35Q9NZE8 188 aaKnown RBP11.89□□□□□ -0.51
CLCF1-201ENST00000312438 LYRM9A8MSI8 78 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms