RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 ESM1Q9NQ30 184 aa10.47□□□□□ -0.73
CLCN6-201ENST00000312413 IGHV4OR15-8A0A075B7B6 117 aa10.47□□□□□ -0.73
CLCN6-201ENST00000312413 A0A087WW49 117 aa10.47□□□□□ -0.73
CLCN6-201ENST00000312413 PLA2G2CQ5R387 149 aa10.46□□□□□ -0.73
CLCN6-201ENST00000312413 FAM110AQ9BQ89 295 aa10.46□□□□□ -0.73
CLCN6-201ENST00000312413 TM2D2Q9BX73 214 aa10.46□□□□□ -0.73
CLCN6-201ENST00000312413 MDFICQ9P1T7 246 aa10.46□□□□□ -0.73
CLCN6-201ENST00000312413 RLFQ13129 1914 aa10.46□□□□□ -0.73
CLCN6-201ENST00000312413 FNDC1Q4ZHG4 1894 aaPredicted RBP10.46□□□□□ -0.73
CLCN6-201ENST00000312413 TEX49A0A1B0GTD5 131 aa10.46□□□□□ -0.73
CLCN6-201ENST00000312413 DEFB1P60022 68 aa10.46□□□□□ -0.73
CLCN6-201ENST00000312413 GPHB5Q86YW7 130 aa10.46□□□□□ -0.73
CLCN6-201ENST00000312413 MPLKIPQ8TAP9 179 aa10.46□□□□□ -0.73
CLCN6-201ENST00000312413 IGLV2-8P01709 118 aa10.46□□□□□ -0.74
CLCN6-201ENST00000312413 PLXND1Q9Y4D7 1925 aa10.46□□□□□ -0.74
CLCN6-201ENST00000312413 UBE2AP49459 152 aa10.46□□□□□ -0.74
CLCN6-201ENST00000312413 IGLC6P0CF74 106 aa10.45□□□□□ -0.74
CLCN6-201ENST00000312413 PLXNA2O75051 1894 aa10.45□□□□□ -0.74
CLCN6-201ENST00000312413 COX7BP24311 80 aa10.45□□□□□ -0.74
CLCN6-201ENST00000312413 BPY2O14599 106 aa10.45□□□□□ -0.74
CLCN6-201ENST00000312413 GDF5OSQ5U4N7 250 aa10.44□□□□□ -0.74
CLCN6-201ENST00000312413 TRBV10-1A0A0K0K1A3 114 aa10.44□□□□□ -0.74
CLCN6-201ENST00000312413 A0A0U1RQV1 116 aa10.44□□□□□ -0.74
CLCN6-201ENST00000312413 FAM236DA0A1B0GTK5 79 aa10.44□□□□□ -0.74
CLCN6-201ENST00000312413 FAM236CP0DP71 79 aa10.44□□□□□ -0.74
CLCN6-201ENST00000312413 CEMP1Q6PRD7 247 aaPredicted RBP10.44□□□□□ -0.74
CLCN6-201ENST00000312413 LINC00322Q6ZN03 302 aaPredicted RBP10.44□□□□□ -0.74
CLCN6-201ENST00000312413 IGKV1D-37A0A075B6S9 117 aa10.43□□□□□ -0.74
CLCN6-201ENST00000312413 SDIM1Q6ZPB5 146 aa10.43□□□□□ -0.74
CLCN6-201ENST00000312413 WNK1Q9H4A3 2382 aa10.43□□□□□ -0.74
CLCN6-201ENST00000312413 MGAMO43451 1857 aa10.43□□□□□ -0.74
CLCN6-201ENST00000312413 TSC2P49815 1807 aa10.43□□□□□ -0.74
CLCN6-201ENST00000312413 A0A0J9YX75 114 aa10.43□□□□□ -0.74
CLCN6-201ENST00000312413 P0C879 139 aa10.43□□□□□ -0.74
CLCN6-201ENST00000312413 ZNF80P51504 273 aaPredicted RBP10.43□□□□□ -0.74
CLCN6-201ENST00000312413 KLK12Q9UKR0 248 aa10.43□□□□□ -0.74
CLCN6-201ENST00000312413 H0Y9J4 135 aa10.42□□□□□ -0.74
CLCN6-201ENST00000312413 IGFL2Q6UWQ7 119 aa10.42□□□□□ -0.74
CLCN6-201ENST00000312413 FANCD2OSQ96PS1 177 aa10.42□□□□□ -0.74
CLCN6-201ENST00000312413 IGHV4-30-2A0A087WSY4 118 aa10.42□□□□□ -0.74
CLCN6-201ENST00000312413 C3orf22Q8N5N4 141 aa10.42□□□□□ -0.74
CLCN6-201ENST00000312413 ATP5EP2Q5VTU8 51 aa10.42□□□□□ -0.74
CLCN6-201ENST00000312413 Q8N7P7 452 aa10.41□□□□□ -0.74
CLCN6-201ENST00000312413 WDR81Q562E7 1941 aa10.41□□□□□ -0.74
CLCN6-201ENST00000312413 NEXN-AS1Q8NBZ9 246 aa10.41□□□□□ -0.74
CLCN6-201ENST00000312413 TMEM89A2RUT3 159 aa10.41□□□□□ -0.74
CLCN6-201ENST00000312413 IGKV4-1P06312 121 aa10.41□□□□□ -0.74
CLCN6-201ENST00000312413 MLST8Q9BVC4 326 aa10.41□□□□□ -0.74
CLCN6-201ENST00000312413 UNQ9165/PRO28630Q6UXU0 137 aa10.4□□□□□ -0.74
CLCN6-201ENST00000312413 TMEM263Q8WUH6 116 aaKnown RBP10.4□□□□□ -0.74
CLCN6-201ENST00000312413 TP73-AS1Q9UF72 201 aa10.39□□□□□ -0.75
CLCN6-201ENST00000312413 TICRRQ7Z2Z1 1910 aa10.39□□□□□ -0.75
CLCN6-201ENST00000312413 FAM240AA0A1B0GVK7 77 aa10.39□□□□□ -0.75
CLCN6-201ENST00000312413 PRO0255Q9UI72 69 aa10.39□□□□□ -0.75
CLCN6-201ENST00000312413 MBD6Q96DN6 1003 aa10.39□□□□□ -0.75
CLCN6-201ENST00000312413 RBX1P62877 108 aa10.39□□□□□ -0.75
CLCN6-201ENST00000312413 PTPRQQ9UMZ3 2332 aa10.38□□□□□ -0.75
CLCN6-201ENST00000312413 WT1P19544 449 aaPredicted RBP10.38□□□□□ -0.75
CLCN6-201ENST00000312413 PIP4P1Q86T03 277 aa10.38□□□□□ -0.75
CLCN6-201ENST00000312413 C10orf105Q8TEF2 133 aa10.38□□□□□ -0.75
CLCN6-201ENST00000312413 DSCAML1Q8TD84 2053 aa10.38□□□□□ -0.75
CLCN6-201ENST00000312413 UFSP1Q6NVU6 142 aa10.38□□□□□ -0.75
CLCN6-201ENST00000312413 V9GYY9 64 aa10.38□□□□□ -0.75
CLCN6-201ENST00000312413 NDUFC2-KCTD14E9PQ53 114 aa10.37□□□□□ -0.75
CLCN6-201ENST00000312413 C4orf48Q5BLP8 95 aa10.37□□□□□ -0.75
CLCN6-201ENST00000312413 F8W735 103 aaPredicted RBP10.37□□□□□ -0.75
CLCN6-201ENST00000312413 P0DMU3 169 aa10.37□□□□□ -0.75
CLCN6-201ENST00000312413 FAM231AP0DMU4 169 aa10.37□□□□□ -0.75
CLCN6-201ENST00000312413 FAM231CP0DMU5 169 aa10.37□□□□□ -0.75
CLCN6-201ENST00000312413 NCKAP5O14513 1909 aa10.37□□□□□ -0.75
CLCN6-201ENST00000312413 ARHGAP21Q5T5U3 1957 aa10.37□□□□□ -0.75
CLCN6-201ENST00000312413 ZFAND2AQ8N6M9 145 aa10.37□□□□□ -0.75
CLCN6-201ENST00000312413 ENHOQ6UWT2 76 aa10.37□□□□□ -0.75
CLCN6-201ENST00000312413 ZNF22P17026 224 aaPredicted RBP10.36□□□□□ -0.75
CLCN6-201ENST00000312413 ZFP36P26651 326 aaKnown RBP10.36□□□□□ -0.75
CLCN6-201ENST00000312413 CDKN2A-AS1Q9UH64 79 aa10.36□□□□□ -0.75
CLCN6-201ENST00000312413 TRBV30A0A0K0K1B3 111 aa10.36□□□□□ -0.75
CLCN6-201ENST00000312413 DEFB135Q30KP9 77 aa10.36□□□□□ -0.75
CLCN6-201ENST00000312413 NLRC5Q86WI3 1866 aa10.36□□□□□ -0.75
CLCN6-201ENST00000312413 TMEM223A0PJW6 202 aa10.36□□□□□ -0.75
CLCN6-201ENST00000312413 TRIAP1O43715 76 aa10.36□□□□□ -0.75
CLCN6-201ENST00000312413 DEFB113Q30KQ7 82 aa10.36□□□□□ -0.75
CLCN6-201ENST00000312413 CASC2Q6XLA1 102 aa10.36□□□□□ -0.75
CLCN6-201ENST00000312413 SIRPDQ9H106 197 aa10.36□□□□□ -0.75
CLCN6-201ENST00000312413 TNRC6BQ9UPQ9 1833 aaKnown RBP10.36□□□□□ -0.75
CLCN6-201ENST00000312413 J3QKU1 62 aa10.35□□□□□ -0.75
CLCN6-201ENST00000312413 PLA2G5P39877 138 aa10.35□□□□□ -0.75
CLCN6-201ENST00000312413 MAPKAPK5-AS1Q8N8E1 139 aa10.35□□□□□ -0.75
CLCN6-201ENST00000312413 TP53TG3Q9ULZ0 132 aa10.35□□□□□ -0.75
CLCN6-201ENST00000312413 LINC00308Q8TCZ7 52 aa10.35□□□□□ -0.75
CLCN6-201ENST00000312413 FAM208BQ5VWN6 2430 aa10.35□□□□□ -0.75
CLCN6-201ENST00000312413 K7ERS5 55 aa10.35□□□□□ -0.75
CLCN6-201ENST00000312413 ZNF295-AS1Q8N0V1 137 aa10.35□□□□□ -0.75
CLCN6-201ENST00000312413 C4orf3Q8WVX3 66 aa10.35□□□□□ -0.75
CLCN6-201ENST00000312413 DEFB4AO15263 64 aa10.34□□□□□ -0.75
CLCN6-201ENST00000312413 MYCNOSP40205 109 aa10.34□□□□□ -0.75
CLCN6-201ENST00000312413 BRWD1-AS2P59051 145 aa10.34□□□□□ -0.75
CLCN6-201ENST00000312413 CCDC140Q96MF4 163 aa10.34□□□□□ -0.75
CLCN6-201ENST00000312413 YPEL4Q96NS1 127 aa10.34□□□□□ -0.75
CLCN6-201ENST00000312413 ODF3Q96PU9 254 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms